Gvermi5858.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi5858.t1
Unique NameGvermi5858.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length405
Homology
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BLAST of Gvermi5858.t1 vs. uniprot
Match: A0A2V3IRL5_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRL5_9FLOR)

HSP 1 Score: 502 bits (1292), Expect = 8.500e-175
Identity = 234/380 (61.58%), Postives = 306/380 (80.53%), Query Frame = 0 
Query:   16 LYQNASLPQKGHTQQLSSPNFNYVATLYPSYRSPRCLLFRCGLPHQAQTTIITSCDKLQASVVKTKSNLSARHCAADFLLTYWDTVEGSYVEGVSFVANNILLATDARELPTSIRSISLSLDERRRLISTQWLAFRPSNQTRDLLRAWLNSAKNHPTDETLALTKIRGCAGRDIACHSRQGVIAAVCEKPLKCAHGNSFLVAATRAFIVLAIAHASVLAARRATVPAEMIAVLLLGVSLLSMRWTSAACTIARALFCRCKTSLVAAAEVDGTLFTGDLRGWFHDRAYYLRDGVYQARVTGGMQPFFPLLFGFYIFLKRVLGDWFLFCGAIIVLATSGATKLVLFLSAWKKGEEEERDEYVKSFDDIKALGLRKKGYGRRF 395
            +++NASLPQKGHTQ ++SPNF+Y+AT++PSYR PRC+L RCG P+Q QTTI T+CD LQ SV + K N++A HC +DFLL++WDT+E SY  GVS+V+N ++L TDAR LP    SIS+S+DE+RR ISTQWL+F PSN TR LLRAWL++AKNHP DE +AL++IRGCAG+DI+CHSRQGVI A CEK L+C   NSFL+   R  ++LA   A  L    A +PAE+IAVLLL VSL +M+WTSAACTIAR++ CRC++SL AA+ +DGTL+ G+LRGW+  RAY LRDGV++ RVTGGMQPFFP LF  ++F KRV+GDW LFCG+++V+    + +LV  +++WKKG EEE+D+YV+S DDI+ALG++K+GYGRRF
Sbjct:    1 MFENASLPQKGHTQHITSPNFDYIATVFPSYRVPRCVLVRCGPPNQPQTTITTTCDTLQVSVQRAKRNITAHHCVSDFLLSHWDTMESSYKHGVSYVSNKVILGTDARNLPFLKNSISVSMDEKRRTISTQWLSFLPSNATRALLRAWLDNAKNHPADENMALSRIRGCAGKDISCHSRQGVIGATCEKALRCGKQNSFLLVVARTIVLLAFLQACALVVSEAAIPAEVIAVLLLVVSLFAMKWTSAACTIARSVLCRCRSSLSAASHMDGTLYEGELRGWYEGRAYLLRDGVHEVRVTGGMQPFFPGLFSLFMFFKRVIGDWVLFCGSMVVILVGFSARLVRIVASWKKGGEEEKDDYVRSIDDIRALGVQKRGYGRRF 380
The following BLAST results are available for this feature:
BLAST of Gvermi5858.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IRL5_9FLOR8.500e-17561.58Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..23
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 332..337
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 214..235
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 236..246
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 272..308
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..16
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..213
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 309..331
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 338..363
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 247..271
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 364..404
NoneNo IPR availableTMHMMTMhelixcoord: 309..331
NoneNo IPR availableTMHMMTMhelixcoord: 338..360

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_1708contigScGOVlb_1708:381405..382619 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi5858.t1Gvermi5858.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_1708 381405..382619 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi5858.t1 ID=Gvermi5858.t1|Name=Gvermi5858.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=405bp
MLRPLLALVVFTVIMLYQNASLPQKGHTQQLSSPNFNYVATLYPSYRSPR
CLLFRCGLPHQAQTTIITSCDKLQASVVKTKSNLSARHCAADFLLTYWDT
VEGSYVEGVSFVANNILLATDARELPTSIRSISLSLDERRRLISTQWLAF
RPSNQTRDLLRAWLNSAKNHPTDETLALTKIRGCAGRDIACHSRQGVIAA
VCEKPLKCAHGNSFLVAATRAFIVLAIAHASVLAARRATVPAEMIAVLLL
GVSLLSMRWTSAACTIARALFCRCKTSLVAAAEVDGTLFTGDLRGWFHDR
AYYLRDGVYQARVTGGMQPFFPLLFGFYIFLKRVLGDWFLFCGAIIVLAT
SGATKLVLFLSAWKKGEEEERDEYVKSFDDIKALGLRKKGYGRRFTTPRR
NITP*
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