Gvermi5850.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male
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Overview
Homology
BLAST of Gvermi5850.t1 vs. uniprot
Match: A0A2V3IFB2_9FLOR (Protein LSM12-like n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFB2_9FLOR) HSP 1 Score: 256 bits (654), Expect = 1.080e-84 Identity = 125/184 (67.93%), Postives = 146/184 (79.35%), Query Frame = 0
Query: 1 MDARPQPGMSFEVGKPIAVHLSDGSLLRGFVHAEDRGAGLLCLELIPSAQIALVPLVNVKSVAPFPHPAESRKWPSNFPLDLQKLRLDERRTYEKHEHEFSQLGVGVSPLAQAVFDVLAKTMQCTWDGKDILILDSVRLAPPYTVKAISTEGSGHAAAVERVQMVLTREAHRITSVADANGVKP 184
MDARPQPGM FEVGKPIA+ L+DGS LRGFVHAED+GA LLCLELIPSA++ALV +VN+KS +P A++RKWPSNF +DL KLR +ERR EK E EF++LGVGVSP AQA+FD LAKTM C WDG+DILILD+VRLAPPY K +S G VERV+M+L EAH I + DANGVKP
Sbjct: 1 MDARPQPGMKFEVGKPIAIQLNDGSFLRGFVHAEDKGAALLCLELIPSAKVALVSIVNIKSASPLTQIADTRKWPSNFHIDLAKLRAEERRICEKREAEFNKLGVGVSPSAQAIFDTLAKTMPCKWDGEDILILDTVRLAPPYNAKCLS----GDTGVVERVKMILENEAHSIRNATDANGVKP 180
BLAST of Gvermi5850.t1 vs. uniprot
Match: R7QH47_CHOCR (LSM12 homolog n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QH47_CHOCR) HSP 1 Score: 182 bits (462), Expect = 9.970e-56 Identity = 88/174 (50.57%), Postives = 117/174 (67.24%), Query Frame = 0
Query: 9 MSFEVGKPIAVHLSDGSLLRGFVHAEDRGAGLLCLELIPSAQIALVPLVNVKSVAPFPHPAESRKWPSNFPLDLQKLRLDERRTYEKHEHEFSQLGVGVSPLAQAVFDVLAKTMQCTWDGKDILILDSVRLAPPYTVKAISTEGSGHAAAVERVQMVLTREAHRITSVADANGV 182
M+FEVGKP++V L DG+ L+GFVHAED AGL+CLELIPSA + L+P+ NVKS P P A+SRKWP+N +DL +L+ ++ R + K EF+ +GVGV+P QAVFDVLAKT+ C W+G I++ +VRL PPY +K+I RV+MVL R + NGV
Sbjct: 1 MAFEVGKPLSVQLVDGTALKGFVHAEDAAAGLVCLELIPSADLTLLPISNVKSATPIPDLADSRKWPANLDVDLPRLKAEQERIFRKRHIEFTHIGVGVTPEGQAVFDVLAKTLPCEWEGNVIVVFGTVRLGPPYDIKSI------------RVRMVLERRTRTPRPAEETNGV 162
BLAST of Gvermi5850.t1 vs. uniprot
Match: A0A2V0NSF4_9CHLO (AD domain-containing protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0NSF4_9CHLO) HSP 1 Score: 82.8 bits (203), Expect = 1.650e-16 Identity = 53/178 (29.78%), Postives = 95/178 (53.37%), Query Frame = 0
Query: 8 GMSFEVGKPIAVHLSDGSLLRGFVHAEDRGAGLLCLELIPS----------AQIALVPLVNVKSVAPFPHPAESRKWPSNFPLDLQKLRLDERRTYEKHEHEFSQLGVGVSPLAQAVFDVLAKTMQCTWDGKDILILDSVRLAPPYTVKAISTEG--SGHAAAVERVQMVLTREAHRI 173
G + +G + + + + G V A D L L+ + A+ A+ LV+ + P HP E + N +D ++ RL E + ++ E + +++GVGV+ AQ++FD L+KT+ C W G+DI++++SV + PPY ++ + G +G A+ER++ VLT E R+
Sbjct: 13 GSQWAIGCKVTIRTTFDEEVTGTVFAYDAATDSLVLQQAGTHGGVNNLRLYAKAAIKELVSAE---PPSHPPEL--FLPN--VDRERARLREEKALKQAEADLAKVGVGVTREAQSIFDALSKTLPCAWRGRDIIVMESVVVPPPYNPESCAARGGGAGEGGALERIRRVLTAERSRL 183
BLAST of Gvermi5850.t1 vs. uniprot
Match: A0A2R6P3K0_ACTCC (AD domain-containing protein n=4 Tax=Actinidia TaxID=3624 RepID=A0A2R6P3K0_ACTCC) HSP 1 Score: 78.2 bits (191), Expect = 8.780e-15 Identity = 57/181 (31.49%), Postives = 90/181 (49.72%), Query Frame = 0
Query: 1 MDARPQPGMSFEVGKPIAVHLSDGSLLRGFVHAEDRGAGLLCLE------LIPSAQIALVPLVNVKSVAPFPHPAESRKWPSNFPLDLQKLRLDERRTYEKHEHEFSQLGVGVSPLAQAVFDVLAKTMQCTWDGKDILILDSVRLAPPYTVKAISTEGSGHAAAVERVQMVLTREAHRITS 175
MDA G F VG +++ + G G + DR + +L L+ P I L+ +K + + AE LDL L+ E + E E +LGVGV+P+AQ++FD L+KT+ WD I++++ VR++ PY ++++ G AA ERV+ VL E R+ S
Sbjct: 1 MDANSFGGEEFAVGCILSIKTTLGDEFDGQIITFDRPSNILVLQEGIKSVSGPRRNIRLLKANYIKEFS-YLGQAEDPLNSKKCYLDLSALQAREESAIRQAEIEAERLGVGVTPVAQSIFDALSKTLPVRWDKTAIVVMNEVRVSSPYLPESVA---GGTPAANERVRKVLELERKRLQS 177
BLAST of Gvermi5850.t1 vs. uniprot
Match: A0A2P6U0H0_CHLSO (LSM12-like protein n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6U0H0_CHLSO) HSP 1 Score: 77.4 bits (189), Expect = 1.360e-14 Identity = 45/120 (37.50%), Postives = 65/120 (54.17%), Query Frame = 0
Query: 56 LVNVKSVAPFPHPAESRKWPSNFPLDLQKLRLDERRTYEKHEHEFSQLGVGVSPLAQAVFDVLAKTMQCTWDGKDILILDSVRLAPPYTVKAISTEGSGHAAAVERVQMVLTREAHRITS 175
+ N+ + P PAE +DLQ+ R E + E E +++GVGV+ AQ +FD LAKT+ C WDG+ I++LD + ++PPY T G AA RV+ VL E R+ S
Sbjct: 58 VTNILQLKPAAGPAEPLP-----AVDLQRCREREDKAVRAAEAEAAKIGVGVTRQAQVIFDALAKTLPCRWDGERIVVLDEIVVSPPYET---CTSLHGDDAAAARVKKVLEAERQRLQS 169
BLAST of Gvermi5850.t1 vs. uniprot
Match: A0A7R9WKN5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WKN5_9STRA) HSP 1 Score: 72.4 bits (176), Expect = 8.860e-13 Identity = 45/129 (34.88%), Postives = 65/129 (50.39%), Query Frame = 0
Query: 23 DGSLLRGFVHAEDRGAGLLCLELIPSAQIALVPLVNVKSVAP--FPHPAESRKWPSNFPLDLQKLRLDERRTYEKHEHEFSQLGVGVSPLAQAVFDVLAKTMQCTWDGKDILILDSVRLAPPYTVKAIS 149
D S FV A + + +I ++ I + +V + P PH ++ R + D R EK SQ+GV V+P AQ+VFD L KT C WDGK I++LD+ R+APPYT ++ S
Sbjct: 44 DASSTAVFVQAIEHTTIKSTIRMIKNSSIKEIKIVGPPTAPPAALPHISKDR---------VHGREADRRGVAEKRA---SQIGVDVTPEAQSVFDALVKTYPCHWDGKTIVVLDTTRVAPPYTAESCS 160
BLAST of Gvermi5850.t1 vs. uniprot
Match: S8A436_DACHA (AD domain-containing protein n=1 Tax=Dactylellina haptotyla (strain CBS 200.50) TaxID=1284197 RepID=S8A436_DACHA) HSP 1 Score: 73.6 bits (179), Expect = 1.340e-12 Identity = 40/106 (37.74%), Postives = 60/106 (56.60%), Query Frame = 0
Query: 79 PLDLQKLRLDERRTYEKHEHEFSQLGVGVSPLAQAVFDVLAKTMQCTWDGKDILILDSVRLAPPYTVKAISTEGSGHAAAVERVQMVLTREAHRITSVADANGVKP 184
P++LQ +R E+ + + GVGVS QA++ L+KTM C W GK I++LD+V + PYTV+ S+ G+ A+ RV+ VL E R+ V +N P
Sbjct: 127 PINLQAMRNREQAALKLEYEKMLGHGVGVSEEGQAIYTALSKTMPCRWQGKHIIVLDTVIIQEPYTVEKCSSP-QGNENALARVKKVLEGERKRLNPVQRSNASTP 231
BLAST of Gvermi5850.t1 vs. uniprot
Match: A0A1V9YWZ0_9STRA (AD domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YWZ0_9STRA) HSP 1 Score: 70.9 bits (172), Expect = 4.360e-12 Identity = 51/162 (31.48%), Postives = 82/162 (50.62%), Query Frame = 0
Query: 13 VGKPIAVHLS-DGSLLRGFVHAEDRGAGLLCLELIPSAQIALVPLVNVKSVAPFPHPAESRKWPSNFPLDLQKLRLDERRTYEKHEHEFSQLGVGVSPLAQAVFDVLAKTMQCTWDGKDILILDSVRLAPPYTVKAISTEGSGHAAAVERVQMVLTREAHRI 173
+G + V+ S D + + G V D +G L LE L+ V + P PA + + + ++LR E+RT + E + +G VSP+ QA+FD L+KTM C W G+ I +++ V + PPY A +T S + +ERV+ VL E ++
Sbjct: 15 LGAWVRVYTSTDEAPIEGSVFTLDPVSGFLVLE--GQNNTLLLHSDVVTRIDPMAAPASGNE---SVRVSEEELRKLEQRTRLQAEKAIASIGKNVSPMGQALFDALSKTMPCEWRGQSIQVMNEVVIDPPY---ATNTTKSANKQMLERVKKVLDGELRKL 168
BLAST of Gvermi5850.t1 vs. uniprot
Match: E1ZJ68_CHLVA (AD domain-containing protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZJ68_CHLVA) HSP 1 Score: 70.5 bits (171), Expect = 6.100e-12 Identity = 39/95 (41.05%), Postives = 56/95 (58.95%), Query Frame = 0
Query: 80 LDLQKLRLDERRTYEKHEHEFSQLGVGVSPLAQAVFDVLAKTMQCTWDGKDILILDSVRLAPPY-TVKAISTEGSGHAAAVERVQMVLTREAHRI 173
+DL + R E + E E +++GV VS AQA+FD LAKT+ C WDG I++LD + +APPY T ++ + +G V RV VL E R+
Sbjct: 80 VDLGRCREREDKAVRAAESEAAKIGVNVSRQAQAIFDALAKTLPCRWDGDRIVVLDEIVVAPPYETCTSLHNDDAG----VMRVSKVLDAERLRL 170
BLAST of Gvermi5850.t1 vs. uniprot
Match: C1MT91_MICPC (Predicted protein n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1MT91_MICPC) HSP 1 Score: 70.5 bits (171), Expect = 6.220e-12 Identity = 48/173 (27.75%), Postives = 85/173 (49.13%), Query Frame = 0
Query: 13 VGKPIAVHLSDGSLLRGFVHAEDRGAGLLCL----ELIPSAQIALVPLVNVKSVAPFPHPAESRKWPSNFPLDLQKLRL-DERRTYEKHEHEF-------SQLGVGVSPLAQAVFDVLAKTMQCTWDGKDILILDSVRLAPPYTVKAISTEGSGHAAAVERVQMVLTREAHRI 173
+G ++ + G G V D G GL L +++ + + ++ V + + P + P ++KL + DE R ++ E + +GV V+ AQ +FD LA+T+ C W+G+ I++LD V+++PPY + + +G AVERVQ VL E ++
Sbjct: 8 IGHVVSGVTATGEKFAGEVFTFDEGTGLAVLRAKGDIVNTHDVRILRAEGVSDL---------KSTPPSDPPKMEKLPVVDEARCQKREEAAVKAATISAANIGVDVTAEAQDIFDALARTLPCRWEGRSIVVLDEVKISPPYA-ECVGV-ATGDPRAVERVQKVLAMEKSKL 169 The following BLAST results are available for this feature:
BLAST of Gvermi5850.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gvermi5850.t1 ID=Gvermi5850.t1|Name=Gvermi5850.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=185bpback to top |