Gvermi5848.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi5848.t1
Unique NameGvermi5848.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length358
Homology
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BLAST of Gvermi5848.t1 vs. uniprot
Match: A0A2V3IFF0_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFF0_9FLOR)

HSP 1 Score: 465 bits (1196), Expect = 1.430e-161
Identity = 241/357 (67.51%), Postives = 288/357 (80.67%), Query Frame = 0 
Query:    1 MGKIFTVTLLLTLCVPVSTDPMPSPRPKKPLSTEDLRRTDSDVSNKLSQLHKTIEALQETMKHRNDGYDFHARHNADQMKVRFERLSAVISRLTKQNSKLYIENRGLRQEKTALVNKISRLEGELDRLAVETKNAGMQAWMKKTASDLRSFLEESGLEHFASPRFSPIIAGLVSNGVVLVPLTMATFFLLHFSKQLTVLRIVMALNLFDLGFAAAIIASSILLLGDPFEGMRHISEVNFVFIQMVLSGVFWLTIGFLVASTAQNRHNRAWKYSTVELFLRSAVAYDYSHRVWTPVMERDDIPIALPAVSYIAYLCAAVANVFLTSRAAWHAVHAERSTARSEQEGEVMVSLVTHHQN 357
            M     V LLL   VPVS++  P+P+P+K L+  +LR+TD DV N+L QLHKTI+A+QETMK+ NDGYD+HA+ NAD+MK+RFE+LSAV+SRLTKQNSK            T LV+KIS+LE +LD+LA +  N+G+  WMK+TA+DLR FLEE+GLEHF SPRFSPIIAGLVSNGVVL+PL MATFFLLH+SK LTVLRIVMALNLFDLGFA AIIASS LLLGDPFEGMRHISE+NFVFIQMV+ GVFWLT GFLVA+  QNR NRAWK+STVEL LRSAVA DYS RVW PVMERDD+PIA+  V Y+ YL +AV NV+LTS+A WH V+A+++  R ++E E+MVS  TH  N
Sbjct:    1 MENALRVVLLLIFIVPVSSEVQPTPKPRKALTAAELRQTDVDVRNRLEQLHKTIDAVQETMKNMNDGYDYHAKQNADRMKLRFEKLSAVVSRLTKQNSKXXXXXXXXXXXXTTLVDKISKLEVQLDKLAAQASNSGVGVWMKQTATDLRKFLEENGLEHFKSPRFSPIIAGLVSNGVVLLPLAMATFFLLHYSKNLTVLRIVMALNLFDLGFALAIIASSALLLGDPFEGMRHISEINFVFIQMVVGGVFWLTAGFLVAAIIQNRTNRAWKFSTVELMLRSAVALDYSTRVWNPVMERDDVPIAMQPVFYLTYLASAVTNVYLTSKAGWHVVYAQKTQIRKQEE-EMMVSFETHRGN 356
The following BLAST results are available for this feature:
BLAST of Gvermi5848.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IFF0_9FLOR1.430e-16167.51Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 90..131
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 21..40
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 191..201
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..19
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 226..236
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 202..225
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 237..259
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 168..190
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 260..357
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..167
NoneNo IPR availableTMHMMTMhelixcoord: 301..323
NoneNo IPR availableTMHMMTMhelixcoord: 202..224
NoneNo IPR availableTMHMMTMhelixcoord: 239..261
NoneNo IPR availableTMHMMTMhelixcoord: 168..190

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_1708contigScGOVlb_1708:356721..357794 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi5848.t1Gvermi5848.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_1708 356721..357794 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi5848.t1 ID=Gvermi5848.t1|Name=Gvermi5848.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=358bp
MGKIFTVTLLLTLCVPVSTDPMPSPRPKKPLSTEDLRRTDSDVSNKLSQL
HKTIEALQETMKHRNDGYDFHARHNADQMKVRFERLSAVISRLTKQNSKL
YIENRGLRQEKTALVNKISRLEGELDRLAVETKNAGMQAWMKKTASDLRS
FLEESGLEHFASPRFSPIIAGLVSNGVVLVPLTMATFFLLHFSKQLTVLR
IVMALNLFDLGFAAAIIASSILLLGDPFEGMRHISEVNFVFIQMVLSGVF
WLTIGFLVASTAQNRHNRAWKYSTVELFLRSAVAYDYSHRVWTPVMERDD
IPIALPAVSYIAYLCAAVANVFLTSRAAWHAVHAERSTARSEQEGEVMVS
LVTHHQN*
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