Gvermi5733.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi5733.t1
Unique NameGvermi5733.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length117
Homology
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BLAST of Gvermi5733.t1 vs. uniprot
Match: A0A2V3ILI3_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ILI3_9FLOR)

HSP 1 Score: 85.5 bits (210), Expect = 1.760e-18
Identity = 52/97 (53.61%), Postives = 62/97 (63.92%), Query Frame = 0 
Query:   19 LPKLQLPDLDLPNLGRKKPPARAAAARPTRSAQSGTVRVRPAGRAAPSDAPTLAELQGAAASRAAAPDTGWKRFPARRMPGANMQRWKDAAKQMAPK 115
            LPKL  PD+DLPN G KK PA+    +   +A    V+VR A  AA  DAPTLAEL G +A+ +     GW+RFP RRMPGANM  WK  AKQ+ PK
Sbjct:   91 LPKL--PDIDLPNFG-KKSPAKQPVVKKRVAAPGTNVKVRAASSAAAKDAPTLAELTGKSANDSIPEGDGWRRFPVRRMPGANMDLWKGIAKQLTPK 184
The following BLAST results are available for this feature:
BLAST of Gvermi5733.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3ILI3_9FLOR1.760e-1853.61Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..116

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_776contigScGOVlb_776:1315035..1315385 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi5733.t1Gvermi5733.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_776 1315035..1315385 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi5733.t1 ID=Gvermi5733.t1|Name=Gvermi5733.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=117bp
MPDLPKLPGLPKLPDLRALPKLQLPDLDLPNLGRKKPPARAAAARPTRSA
QSGTVRVRPAGRAAPSDAPTLAELQGAAASRAAAPDTGWKRFPARRMPGA
NMQRWKDAAKQMAPKN*
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