Gvermi5730.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi5730.t1
Unique NameGvermi5730.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length699
Homology
BLAST of Gvermi5730.t1 vs. uniprot
Match: A0A2V3ILL2_9FLOR (Signal recognition particle subunit SRP72 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ILL2_9FLOR)

HSP 1 Score: 854 bits (2207), Expect = 3.320e-304
Identity = 469/701 (66.90%), Postives = 556/701 (79.32%), Query Frame = 0
Query:    1 MTASELQDGAVDELQQLFNKAQYDAVLTRVNQFQKRNKKRSQSVGHILDAARAFSLIHLGRSDEAIPCIEALLQSESPPFKQQILYAKAYAAWATNERLEEAIDLVDPLQGEDVQKLKAQLLYRAGRYEEAAALYEALLARARSTLKEKKQPTATSRWRLPGITSRTTQSASPVTAAELEHLTSAVNELATNAMASMILARKHVKLPSVQEGLRPSYEIEYNAACSHIVLNDLEQAAVCLEKAEALINSELDEEDDDIEEATAPLFVQQAFLNHMAGNIEEAKQSYYDVVNGRRCDAASLAVAANNLTVAIGQLALGKSTLSIAQDGTRALSKEQHEALVEGLKKMKTTASKNVVRKLTSHQREAMSRNRAILFVQLGRLDACRSEIEMLKGHHSDDALVCLLEASLCAKNGKLENADKLLSEAADTPIVRAARVQLAASHGQKQKAAELLQELFPDSAAAVCTAASLLEQCSHVEDGISFLKRFESKASGDLKTSARRELAAMLLRNGLYRESAETLQSCSRGSSDDTLIIAQLVVSTSHFDPDEAGRIALALPGAHLHITEEDAARLEQLPPPKRKHLSNRMAEPALDVLDKIPKANRRRDKKKSKKK--RLPKNYDPNGPPPDPERWLPKTLRSGYRKKKVKRDQ-PFRGSQGADAASAETAAQSMANKSNSKASSVPTNVLPPRNRPRIQRKKKGRK 698
            MTA+EL   AVDEL+QLFN+ QY+A+LTRVNQF+KRNKK S S+ H L+AARAF+LI+LG+S++A+P IEALL+ ++PPFK+QI YA+AYAAWA+NER+ EAID+V    G D  KL++QLLYRAGRY EAA LY  LL  AR  LKEKK PTATSRWR  G+ SR+ Q   PVTA E+E LTSAVNELATNAMAS ILA  + +LP++QEGLR SYE++YNAAC HI ++D E A   LE A+ALINSELDEE DD+EEAT+PLFVQQA+L HMAG+IE AKQSYY ++ GRRCDAA+LAVAANN TVAIGQLALGKS LSI QDGTRALSK+QHEALVEGLKKMK TAS+NV+RKLTS QR+AM+RNRA+L+VQ+GRLD+CRSEIEMLK H+ DD LV L+EASL AK GKLE AD +LS+AADT +VRAARVQLAA++  K  AA+LLQ LFPD  AAVCTAAS LEQC  VE+G S L+R  S++SG LK  A RELAAMLLRNG Y+ESA  L+ C+  +  D L  AQLVV+TSHFDPD+A RIA  L        E+DA +LE LPPPKRKH++NR+ +   +   +   A+    KKK      RLPKNY+PNGPPPDPERWLPKTLRSGY+KKK KRDQ  FRGSQGADAASAE AAQ MA K +SKA+    + LPPR RPR+QR+KK +K
Sbjct:    1 MTATELSLSAVDELRQLFNRGQYEALLTRVNQFRKRNKKISPSLDHALEAARAFALIYLGKSEQALPSIEALLKLKNPPFKEQISYARAYAAWASNERVTEAIDVVSDFTGADADKLRSQLLYRAGRYGEAAELYGRLLQEARDALKEKKHPTATSRWRFAGLGSRSAQVTPPVTAVEVEQLTSAVNELATNAMASFILAGDYQELPAIQEGLRQSYEVQYNAACKHIAVHDFESAETSLETADALINSELDEEVDDVEEATSPLFVQQAYLRHMAGDIESAKQSYYQIITGRRCDAATLAVAANNFTVAIGQLALGKSGLSITQDGTRALSKQQHEALVEGLKKMKATASRNVMRKLTSKQRQAMARNRAVLYVQIGRLDSCRSEIEMLKVHYPDDVLVFLVEASLLAKQGKLEAADNILSQAADTQVVRAARVQLAAAYDNKDGAAQLLQTLFPDEPAAVCTAASFLEQCGKVEEGFSLLRRLVSRSSGQLKEKANRELAAMLLRNGRYKESAAILRHCTSTAKKDMLSTAQLVVATSHFDPDDADRIASVLHDTGSSAVEQDAEKLEGLPPPKRKHMANRIPDIGENNQYRALDASSSHGKKKXXXXXXRLPKNYNPNGPPPDPERWLPKTLRSGYKKKKQKRDQVSFRGSQGADAASAEEAAQKMAEKPDSKAAQQ--HPLPPRARPRLQRRKKAKK 699          
BLAST of Gvermi5730.t1 vs. uniprot
Match: R7QSM7_CHOCR (Signal recognition particle subunit SRP72 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QSM7_CHOCR)

HSP 1 Score: 400 bits (1027), Expect = 3.850e-126
Identity = 287/718 (39.97%), Postives = 389/718 (54.18%), Query Frame = 0
Query:   12 DELQQLFNKAQYDAVLTRVNQFQKRNKKRSQSVGHILDAARAFSLIHLGRSDEAIPCIEALLQSESPPFKQQILYAKAYAAWATN--ERLEEAIDLVDPLQGEDVQKLKAQLLYRAGRYEEAAALYEALLARARSTLKEKKQPTATSRWRLPGITSRTTQSASPVTAAELEHLTSAVNELATNAMASMILARKHVKLPSV-------QEGLRPSYEIEYNAACSHIVLNDLEQAAVCLEKAEALINSELDEEDD----------DIEEATAPLFVQQAFLNHMAGNIEEAKQSYYDVVNGRRCDAASLAVAANNLTVAIGQLALGKSTLSIAQDGTRA----LSKEQHEALVEGLKKMKTTASKNVVRKLTSHQREAMSRNRAILFVQLGRLDACRSEIEMLKGHHSDDALVCLLEASLCAKNGKLENADKLLS-EAADTPIVRAARVQLAASHGQKQKAAELLQELFPDSAAAVCTAASLLEQCSHVEDGISFLKRFESKASGDLKTSARRELAAMLLRNGLYRESAETLQSCSRGSSDDTLIIAQLVVSTSHFDPDEAGRIALALPGAHLHITEEDAARLEQLPPPKRKHLSNRMAEPALDVLDKIPKANRRRDKKKSKKK------RLPKNYDPNGPPPDPERWLPKTLRSGYRKKKVKRDQPFRGSQGADAASAETAAQSMANKSNSKASSVPTN-VLPPRNRPRIQRKKKGRK 698
            D+L+ LF + ++DAV+TR +    R K   ++   +L + R  SL+H GR  EA     A+      P+   +++A+ Y AWA+   E    ++ +V  L G D +KL+AQLLYR+G Y E+A+++ ALLA  R+ L++ ++P +TSRWRLPG+   T     P+T AEL+ L  AVNELATNA A+ +LA K     ++        +  R + E E    C H    D ++      KA+A++ ++ +EE +          + EE  AP+ VQ A+L H+ G ++EA++ Y D +  R  D ASLAVAANNLTVA+GQLA GK   S    GT A    L KEQHEALVEGLKKM+ T+ + V RKL  +QR AM+ NRA+L VQ+GR DACR+E+  LK     +ALV L+EASL AK G L  AD +L+    D+ +VRAARVQL                                                  K+SG    SA+  L+++LLRN  Y E+A  L+     +  D++  AQLVV+TS+FD  EA R AL LP +     + DA +LE LP                                           RLPKNYDP GPPPDPERWLPKTLRSGY++KK K    FRGSQGADAA+A+ AA   A KS +KAS+      LPP  R ++ RKKKGR+
Sbjct:   13 DQLRDLFLRGEHDAVVTRCDLLLNRKKLDQKASRTLLQSIRFASLLHSGRIPEASTAATAI------PYSPSLVFARHYLAWASADLEAASSSVQIVHNLPGSDARKLEAQLLYRSGSYAESASIFSALLAVTRNDLEDARRPASTSRWRLPGLA--TAPEKIPLTRAELDLLRDAVNELATNATAAFVLAGKPDDALAIVRQVGTWSKETRKATENEGGLLCGHY---DGDR------KAKAIVLAQTEEEVEXXXXXXXXAGETEEIMAPIRVQMAYLTHLKGGVQEAEKLYADAMRDRNADPASLAVAANNLTVALGQLAFGKRNDSAEISGTTANGPSLPKEQHEALVEGLKKMRATSGRTVERKLALNQRRAMAANRAVLLVQMGRYDACRAELAKLKTEFPKEALVPLIEASLVAKQGNLRTADSILTGNVDDSEVVRAARVQLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSSGADALSAKTALSSVLLRNAKYEEAAGVLREVCNANPSDSVAQAQLVVATSYFDATEAERAALLLPSSMSTQNDIDAKKLEALPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLPKNYDPEGPPPDPERWLPKTLRSGYKRKKAKDQNNFRGSQGADAAAADAAAMKNAEKSTAKASATAAEGPLPPSGRAKL-RKKKGRR 712          
BLAST of Gvermi5730.t1 vs. uniprot
Match: A0A7S0BI04_9RHOD (Signal recognition particle subunit SRP72 n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BI04_9RHOD)

HSP 1 Score: 178 bits (452), Expect = 6.080e-45
Identity = 163/495 (32.93%), Postives = 251/495 (50.71%), Query Frame = 0
Query:  218 EIEYNAACSHIVLNDLEQAAVCL----EKAEALINSELDEEDDDIEEATAPLFVQQAFLNHMAGNIEEAKQSYYDVVNGRRCDAASLAVAANNLTVAIGQLALGKSTLSIAQDGTRALSKEQHEALVEGLKKMKTTASKNVVRKLTSHQREAMSRNRAILFVQLGRLDACRSEIEMLKGHHSDDALVCLLEASLCAKNGKLENADKLLSEAADTPIVRAARVQLAASHGQKQKAAELLQELFPDSAAAVCT------AASLLEQCSHVEDGISFLKRFESKASGDLKTSARRELAAMLLRNGLYRESAETLQSCSRGSSDDTLIIAQLVVSTSHFDPDEAGRIALALPGAHLHITEEDAARLEQLPPPKR-KHLSNRMAEPALDVLDKIPKANRRRDKKKSKKKRLPKNYDPNGPPPDPERWLPKTLRSGYRKKKVKRDQPFRGSQGADAASAETAAQSMANKSN----SKASSVPTNVLPPRNRPRIQRKKKGR 697
            E+ +N AC+ I   DL+QA   L    EK   ++ +E   E+D  +E  A + VQ A++  + G  E A  SY  +++ +  D A  AVA+NNL V +   A G++   +A                   K++K+T +  +  KLT  Q + M  NRAI+ +++ RLD   SEIE LK   +D   + L+++S  +K+ K + A++LL    +  I +AA  QL    G  + AA  L EL   S +A+ T      AA + E+ S +  G++  K +      +L  S+ RELA M  RN +  E+   L+     S DD   +A +V+++S+ D + A   A  LP     + E DA  LE LP P+R   +  R        +D   + N  + KKK +K + P+  +PNGP  DPERW+PK +RSG RKKK + D   RGSQGA  A+ E A++ MA+ +     +  SS PT    P+   + ++KK  R
Sbjct:   61 EVLFNLACAMISAGDLDQAERTLNDAYEKGSKILEAEGASEEDANDEL-AGVLVQLAYVQQLKGQNEAASNSYEKLLDQKISDLAVAAVASNNLAV-LKWDAPGRNARGLA-------------------KRLKSTTAPGLEYKLTKPQLQIMGCNRAIVNLEMSRLDVATSEIEALKTLAADSDNLTLIQSSQLSKSKKFDEAEELLKTIENPLIRKAANAQLKLVRGDFEGAANSLAEL-RSSPSAIATSMTLYEAAGMPEKASLLVKGVA--KEWADSGRKELVLSSLRELAEMFHRNKMDSEAVGALRDVLALSPDDEAAVANIVIASSNMDYETAENYASRLPALQ-GMREMDAIELEALPVPRRGADMDKRRVR-----IDAGSEENAPKTKKKKRKNKKPQTLNPNGP--DPERWIPKHMRSGARKKKKRADAVSRGSQGAGLAATEAASERMAHAAERAGRNVGSSGPTATSRPKGTTKTKKKKHRR 523          
BLAST of Gvermi5730.t1 vs. uniprot
Match: A9THX6_PHYPA (Signal recognition particle subunit SRP72 n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9THX6_PHYPA)

HSP 1 Score: 172 bits (437), Expect = 6.430e-42
Identity = 183/603 (30.35%), Postives = 279/603 (46.27%), Query Frame = 0
Query:   84 ILYAKAYAAWATNERLEEAIDLVDPLQGEDVQKLKAQLLYRAGRYEEAAALYEALLARARSTLKEKKQPTATSRWRLPGITSRTTQSASPVTAAELEHLTSAVNELATNAMASMILARKHVKLPSVQEGL----RPSYEIEYNAACSHIVLNDLEQAAVCLEKAEALINSELDEED---DDIEEATAPLFVQQAFLNHMAGNIEEAKQSYYDVVNGRRCDAASLAVAANNLTVAIGQLALGKSTLSIAQDGTRAL--SKEQHEALVEGLKK---MKTTASKNVVRKLTSHQREAMSRNRAILFVQLGRLDACRSEIEMLKGHHSDDALVCLLEASLCAKNGKLENADKLLSEAADT-----PIVRAARVQLAASHGQKQKAAELLQELFP--DSAAAVCTAASLLEQCSHVEDGISFLKR----FESKASGDLKTSAR----RELAAMLLRNGLYRESAETLQSCSRGSSD--DTLIIAQLVVSTSHFDPDEAGRIALALPGAHLHITEEDAARLEQLPPPKRKHLSNRMAEPALDVLDKIPKANRRRDKKKSKKKRL-PKNYDPN--GPPPDPERWLPKTLRSGYRKKKVKRDQ-PFRGSQG 653
            + + KAY  +         I L    +  +V +L+AQ+LYR G +EE  + YE L        K+ K                                    N+L TN +A+ ++  +  ++PS+ E L    R  +EI +NAAC+ +   +  +A   L  A  +    L EED   +DIE+  AP+ VQ A++  M G  EEA  SY  ++  +  DA SLAVA NNL               IA  G+R L  S ++ E L+E  KK    K   ++N+  +LT  Q+EA+  NR +L +   +LD  R     L     D+ +  +L ASL  K  K + AD+LL++ A+        V   R Q AA+ G    AA+ L+++    +    + T  +L  +   V++  + L      ++S    + +TS      +E AA  L++     +A+  +   + SS    +  +  LV S ++ +PD+A      LP     ++  D   LE++PP        R AE A +   K  +A   + KKK K+K L PK +DP   GPPPDPERWLP+  RS YR KK KR+Q P RGSQG
Sbjct:   99 LTFQKAYCLYRIGRLPAALIALKGLERNVNVLQLEAQILYRNGDWEECISSYETLF-------KQHKV---------------------------------VANDLKTNIVAAYVVGGRAAEVPSLMETLKVHPRSGFEIAHNAACALVEKGEFAKAEELLMMAHRIGQEALIEEDVPEEDIEDDLAPISVQLAYVQQMLGRFEEAIGSYNAILKRKPADAPSLAVATNNL---------------IALKGSRDLFDSLKKTEKLLE--KKDASQKLQLAENLENRLTMRQKEALCFNRCLLLLHSNKLDQAREFTSSLSKTFPDNPIPAILSASLLWKENKAQKADELLADFAEKHEDVGKDVHFVRAQAAAAAGNYLLAAKCLEQITSARNKPGMIATLVALKSKGGIVKEAETVLDEAIQYWDSYMGDEDQTSVLESILQEAAAFKLKHNKMEAAAKVYERLMKSSSPVVKSEALHGLVASYAYTNPDKAAEYEKQLPPLR-GVSGLDVEALEKVPPWLLNVKRGRAAEEAGEK--KEHRAENDKPKKKRKRKPLYPKGFDPANPGPPPDPERWLPRKERSSYRPKKGKRNQAPIRGSQG 641          
BLAST of Gvermi5730.t1 vs. uniprot
Match: A0A1S3K477_LINUN (Signal recognition particle subunit SRP72 n=1 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3K477_LINUN)

HSP 1 Score: 163 bits (413), Expect = 6.290e-39
Identity = 182/656 (27.74%), Postives = 298/656 (45.43%), Query Frame = 0
Query:   33 FQKRNKKRSQSVGHILDAARAFS-----LIHLGRSDEAIPCIEALLQSESPPFKQQILYAKAYAAWATNERLEEAIDLVDPLQGEDV--QKLKAQLLYRAGRYEEAAALYEALLARARSTLKEKKQPTATSRWRLPGITSRTTQSASPVTAAELEHLTSAVNELATNAMASMILARKHVKLPSVQEGLRPSYEIEYNAACSHIVLNDLEQAAVCLEKAEAL----INSELDEEDDDIEEATAPLFVQQAFLNHMAGNIEEAKQSYYDVVNGRRCDAASLAVAANNLTVAIGQLALGKSTLSIAQDGTRALSKEQHEALVEGLKKMKTTASKNVVRKLTSHQREAMSRNRAILFVQLGRLDACRSEIEMLKGHHSDDALVCLLEASLCAKNGKLENADKLLSEAADTPIVRAARVQLAASH-----GQKQKAAELLQELFPDSAAAVCTAASLLEQCSHVEDGISFLKRFESKASGDLKTSARRELAAML--------LRNGLYRESAETLQSCSRGSSDDTLIIAQLVVSTSHFDPDEAGRIALALPGAHLHITEEDAARLEQ---LPPPKRKHLSNRMAEPALDVLDKIPKANRRRDKKKSKKKRLPKNYDPNGPPPDPERWLPKTLRSGYR-KKKVKRDQPFRGSQGADAASAE 660
            ++K  K  ++ +  + D   AF      L+HLG  ++A+  I       S   + ++++ KAY  +  N+  +  + L + ++  DV  Q+L AQ+LYR   YEE  +LY+ L+  +    ++++                                    N  A  A A  I   + V+   ++E    SYE+ YN+AC H+     ++A   L KAE +     + + D  ++++E+  A + VQ  F   M G  EEA + Y  VV  +  DAA  AVA+NN+                      +L+K+Q+  + +  KKMKT  S+ V +KLTS Q++A+  N+ +L +   + + CR   + L+  H +     L+ A+ C K+ ++  A + L E   +   ++  ++L  +      G    A E L+ L   S      +A L+      ED  S  +          K +   E  A L        LR G    +A+ L+   +    D+ I+AQL+ + S F+P +A  ++ +LP A     E D   LE+   +  PK    S ++  P     D++ +  R   KKK KK +LPKNYDP G  PDPERWLPK  RS YR K+K KR +  RG+QGA +  A+
Sbjct:   24 YEKALKTANKILQELPDDVTAFHCKIVCLVHLGEFEDALKKIT------SSKHQGELVFEKAYCQYRLNKTSDALVTLRE-IEDPDVRVQELMAQVLYRLENYEECYSLYKNLVKNSEDDFEQERY----------------------------------TNFSAVMA-ALQISGTQDVEDLGLEED---SYELLYNSACLHLAKGLYKKAEDKLRKAEEMCRQTFSEDADATEEELEDELAIIRVQLGFALQMQGRTEEALKLYNLVVKQKPSDAALTAVASNNVV---------------------SLNKDQN--VFDSKKKMKTATSEGVQQKLTSAQKQAIQLNQCLLLMYTNQGEQCRKSAKALQAMHPESDKPSLIIAAQCVKDKQIPKAVEALQEHVSSHPEQSVSIKLTLAQLNLLQGMVYPACENLRALGEHSFRPGVVSA-LVSLYLKEEDRASASEVLNQAVDWWKKNNPNSEETATLMTSNANFQLRYGSAEMAAKLLEELRKQKPKDSKILAQLISAYSKFNPAKAQELSKSLPSASEIAQELDVEALEKSINVMGPKYIKKSTKVESPRPGTDDELLQKKR---KKKHKKGKLPKNYDP-GSDPDPERWLPKKERSYYRGKRKDKRKEIGRGAQGATSGGAD 606          
BLAST of Gvermi5730.t1 vs. uniprot
Match: UPI000994EA8B (signal recognition particle subunit SRP72 n=1 Tax=Pseudomyrmex gracilis TaxID=219809 RepID=UPI000994EA8B)

HSP 1 Score: 163 bits (413), Expect = 6.350e-39
Identity = 181/674 (26.85%), Postives = 304/674 (45.10%), Query Frame = 0
Query:   13 ELQQLFNKAQYDAVLTRVNQFQKRNKKRSQSVGHILDAARAFSLIHLGRSDEAIPCIEALLQSESPPFKQQILYAKAYAAWATNERLEEAIDLVDPLQGEDVQ--KLKAQLLYRAGRYEEAAALYEALLARARSTLKEKKQPTATSRWRLPGITSRTTQSASPVTAAELEHLTSAVNELATNAMASMILARKHVKLPSVQEGLRPSYEIEYNAACS------HIVLNDLEQAAVCLEKAEALINSELDEE---DDDIEEATAPLFVQQAFLNHMAGNIEEAKQSYYDVVNGRRCDAASLAVAANNLTVAIGQLALGKSTLSIAQDGTRALSKEQHEALVEGLKKMKTTASKNVVRKLTSHQREAMSRNRAILFVQLGRLDACRSEIEML-KGHHSDDALVCLLEASLCAKNGKLENADKLLSEAA----DTPIVRAARVQLAASHGQKQKAAELLQEL------FPDSAAAVCTAASLLEQCSHVEDGISFLKRFESKASGDLKTSAR--RELAAMLLRNGLYRESAETLQSCSRGSSDDTLIIAQLVVSTSHFDPDEAGRIALALPGAHLHITEEDAARLEQLPPPKRKHLSNRMAEPALDVLDKIPKANRRRDKKKSKKKRLPKNYDPNGPPPDPERWLPKTLRSGYRKKKVKR--DQPFRGSQGADAASAE 660
            EL +L   A Y+  L   N    R    SQ  G +    +   LIHL + +EA+  IE     +SP     + + K Y  +  N+   EA  + D +Q   ++  +LKAQ+LYR+G YE+   +Y  +        +E+++               T  SA                      +A++ +   ++++PS++E    +YE+ YN AC       H     L +A   L  AE +    L+E+   +++IE     + VQ  +   + G  +EA+  Y +V+  +  D A +AVA NNL                       L+K+Q+  + +  ++MKT   +++  KLTS QR+ ++ N+ +L +   + + C      L K + S +A    ++A   +K GK + A KLL+E A    + P+ + A VQ+  SH +++ A ++L+ L       P   +A+ T     +        +     +  K  G  +      R+ A   LR G    + + LQ     S  D   +AQLVV+   F P++A  +A  LP  H      D   LE          + +  EP+   L    + ++++ KK+ +K +LPKNYDPN PP DPERWLP+  RSG+RKK+ +R  D   +G+QGA A +++
Sbjct:   14 ELSKLGQIADYERALKVAN----RILSISQDEG-VAFQCKIICLIHLSKFNEALQTIE-----KSPKLAVNLEHEKTYCLYRLNKS-SEASKVTDSVQNPSLKDKELKAQILYRSGEYEQCYDIYRDIFKNYNDEYEEERE---------------TNLSA---------------------VLANLAIEGCNLEVPSLREH---TYELIYNVACRLLAQGIHTHKTILAEAEKKLRTAEKMCKEGLEEDGASEEEIENELGIIRVQLGYCLQLQGRDKEAQALYTNVLKAKPDDIALIAVANNNLV---------------------CLNKDQN--VFDSKRRMKTATHESLEHKLTSRQRKNIAYNQCLLALYTDQGEQCHQLCNNLAKDYPSLEADAMFIKAVQLSKEGKPKEAAKLLTEHAVGDYELPM-KLASVQILLSHDERKDAIDILENLNEKDRSLPGIVSALVTLHMADDDREKASTALKNAVAYYKKNKGTTENLGELWRQAANFYLRGGELEIATDILQELVDSSPSDVKTLAQLVVAYVEFCPEKAKALAKRLPPLHDLAENIDVDALENSSWVIGAKTAKKKIEPSPGKL--ASEVSKKKQKKRKRKGKLPKNYDPNVPP-DPERWLPRHERSGFRKKRDRRNRDATLKGTQGAAAGASD 610          
BLAST of Gvermi5730.t1 vs. uniprot
Match: A0A7S1TBR2_9RHOD (Signal recognition particle subunit SRP72 n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TBR2_9RHOD)

HSP 1 Score: 160 bits (406), Expect = 5.850e-38
Identity = 193/721 (26.77%), Postives = 320/721 (44.38%), Query Frame = 0
Query:    8 DGAVDELQQLFNKAQYDAVLTR----VNQFQK-RNKKRSQSVGHILDAARAFSLIHLGRSDEAIPCIEALLQSESPPFKQQILYAKAYAAWATNERLEEAID----LVDPLQGEDVQKLK---AQLLYRAGRYEEAAALYEALLARARSTLKEKKQPTATSRWRLPGITSRTTQSASPVTAAELEHLTSAVNELATNAMASMILARKHVKLPSVQEGLRPSYEIEYNAACSHIVLNDLEQAAVCLEKAEALINSELDEED---DDIEEATAPLFVQQAFLNHMAGNIEEAKQSYYDVVNGRRCDAASLAVAANNLTVAIGQLALGKSTLSIAQDGTRALSKEQHEALVEGLKKMKTTASKNVVRKLTSHQREAMSRNRAILFVQLGRLDACRSEIEMLKGHHSDDALVCLLEASLCAKNGKLENADKLLSE----AADTPIVRAARVQLAASH-----GQKQKAAELLQEL-FPDSAAAVCTAASLLEQCSHVEDGISFLK-RFESKASGDLKTSARRELAAMLLRNGLYRESAETLQSCSRGSSDDTLIIAQLVVSTSHFDPDEAGRIALALPGAHLHITEEDAARLEQLPPPKR---KHLSNRMAEPALDVLDKIPKANRRRDKKKSKKKRLPKNYDPNGPPPDPERWLPKTLRSGYRKKKVKRDQPFRGSQGADAASAETAAQSMANKSNSKASSVPTN-VLPPRNRPRIQRKKKGRK 698
            D  +DE++ LF   ++    +R    + Q  +  N+  S ++  +L  A+  +LI  GR+ EA     A+           + + +AY+ +  NE      D    L D +  E+   LK   AQ+ YR G Y E+A +YE + +R         +P  T  W+         +++   +   LE L + +    T +  S  +    +KL +  EG   +Y   YN +C+ I   DL  A V L  A     + L+ E+   ++IE+  A    Q AF+    G +++AK  Y +++  +  D + +AV ++NL              + A+DG +         L++ LKKMK +  +    +LT  QR  +  NR ++  +LG+++    ++  L+     D  + L E +L +   K E A +   +     +D     ++RV+LA +      G    A E+L+          + T AS+LE+   + + I +L    +  +S +L    +  LA +  R  L+ E+AE   +       +  ++  LV S S  +  EA R AL L        E D   LE  PPP R   K L  R+AE + +                     LPKN+ P+ PPPDPERWLPK+LRS  +K+++KR    +GSQG D  S +T    +AN +    S+ PT  V+    RPR  +KK  R+
Sbjct:    4 DRTLDEVRSLFKNGEFIPAASRAKRGIEQLDRPENRAGSVTIRDVLKKAQLAALILAGRNTEAAALAPAV----------DLCFERAYSLYNGNELTAALADIQKLLSDKMTPENEMPLKQLLAQIHYRMGSYSESAEVYEGIYSRM-------TEPRRTRIWQ---------RASGSQSGPSLERLQANLCAAFTVSGRSAEVLSMDLKLDA--EG---NYTGAYNLSCALIDAGDLAGAKVLLYNAIDWCRAVLEREEYSQEEIEDELALYRSQLAFILQSTGELQQAKDEYLNILKHKPTDRSLVAVISSNL--------------ASARDGEKM-------NLLDILKKMKVSVGEGQSLRLTQQQRRIVGMNRCLIQHELGKIEDALLDVRRLRDQFPMDVDLLLTEVALLSHEKKYEVAKERTVQFQVRLSDPSAGVSSRVELALAQIELMSGAFDNAIEILRNSGIARKPGTLATVASILEKSGKISETIEYLNSELQRSSSAELGAKLQEGLAYLYQRQQLHAEAAEVFSNLLSNDPGNVDLLGALVHSLSWVNVGEAERHALNLQALIDSGEEIDVDALESSPPPSRPGDKRLRRRLAEKSDETQXXXXXXXXXXXXX------LPKNWGPDDPPPDPERWLPKSLRSSNKKRRIKRIDIGKGSQGTDVTSRKTDHLDVANTA--VGSNTPTAAVVSESQRPRGAKKKSNRR 664          
BLAST of Gvermi5730.t1 vs. uniprot
Match: A0A6P6TL77_COFAR (Signal recognition particle subunit SRP72 n=3 Tax=Coffea TaxID=13442 RepID=A0A6P6TL77_COFAR)

HSP 1 Score: 160 bits (404), Expect = 1.050e-37
Identity = 174/627 (27.75%), Postives = 273/627 (43.54%), Query Frame = 0
Query:   52 RAFSLIHLGRSDEAIPCIEALLQSESPPFKQQILYAKAYAAWATNERLEEAIDLVDPLQGE-DVQKLKAQLLYRAGRYEEAAALYEALLARARSTLKEKKQPTATSRWRLPGITSRTTQSASPVTAAELEHLTSAVNELATNAMASMILARKHVKLPSVQEGLR----PSYEIEYNAACSHIVLNDLEQAAVCLEKAEALINSELDEE---DDDIEEATAPLFVQQAFLNHMAGNIEEAKQSYYDVVNGRRCDAASLAVAANNLTVAIGQLALGKSTLSIAQDGTRALSKEQHEALVEGLKKMKTTASKNVVRKLTSHQREAMSRNRAILFVQLGRLDACRSEIEMLKGHHSDDALVCLLEASLCAKNGKLENADKLLSEAAD-----TPIVRAARVQLAASHGQKQKAAELLQEL--FPDSAAAVCTAASLLEQCSHVEDGI----SFLKRFESKASGDLKTSA-RRELAAMLLRNGLYRESAETLQSCSRGSSDDTLIIAQLVVSTSHFDPDEAGRIALAL-PGAHLHITEEDAARLEQLPPPKRKHLSNRMAEPALDVLDKIPKANRRRDKKKSKKKRLPKNYDPN--GPPPDPERWLPKTLRSGYR-KKKVKRDQPFRGSQGA 654
            +  +LI   + D+A+  I    Q  +  F     + KAY  +  N +LEEA++ +  L+G  +   L++Q+LYR G+ +    +Y+ LL                                            S +  L  N +A ++ A K  ++  V + LR     S+E+ YN ACS I     + A   L  A  +    L +E   DD+IE   AP+ VQ A++  M GN ++A  SY D++     D +SLAVA NNL    G             DG R L +   +   +G +  K T   ++  KL++ QREA+  NR +L +   +LD  R  +  L G      +  LL+A++  +  K   A+++L + A+     + ++  AR Q+AA+ G  Q AAE L ++       A V T  SL E+   ++       S ++ + +  + D K     +E AA  LR+G   E+A   +   +       ++  L+ + +H D ++A      L P   L   + D         P     +  +AE A D      K   +         + PK +DP   GPPPDPERWLPK  RS YR K+K KR    RGSQGA
Sbjct:   61 KVVALIKNDKIDQALTTI----QESAKKFPVDFSFLKAYCLYRQN-KLEEALESLKGLEGSTETMLLESQILYRLGKVDACVDVYQKLLK-------------------------------------------SKIQSLEINVIAGLVSAGKANEVQGVMDSLRVKATSSFELAYNTACSLIERGKYKDAEQLLLSARRIGQETLMDENFADDEIENELAPIAVQLAYVQQMLGNTQDALVSYTDIIKRNLADESSLAVAINNLIALKGP--------KDVSDGLRKLDRLIEKG--DGTQSYKLTHGLDL--KLSTMQREALYTNRMLLLLHSNKLDQARELVTALPGMFPLSVMPVLLQAAMHVRENKAGKAEEILGQFAEKFPEKSKVILLARAQIAAAAGHPQVAAESLAKIADIQHMPATVATIVSLKERAGDIDGAEAVFDSSIRWWSNAMTEDNKLDIIMQEAAAFKLRHGRKEEAARLYEELVKSHGSVGALVG-LIQTVAHADIEKAETYEKQLKPLPGLKAVDVDGLEKTSGAKPVESGPTAGIAE-AYDA-----KTKEKXXXXXXXXPKYPKGFDPANPGPPPDPERWLPKRERSSYRPKRKDKRAAQIRGSQGA 620          
BLAST of Gvermi5730.t1 vs. uniprot
Match: UPI001C71C42B (signal recognition particle subunit SRP72 n=1 Tax=Parasteatoda tepidariorum TaxID=114398 RepID=UPI001C71C42B)

HSP 1 Score: 155 bits (392), Expect = 3.230e-36
Identity = 185/712 (25.98%), Postives = 315/712 (44.24%), Query Frame = 0
Query:   13 ELQQLFNKAQYDAVLTRVNQFQKRNKKRSQSVGHILDAARAFSLIHLGRSDEAIPCIEALLQSESPPFKQQILYAKAYAAWATNERLEEAIDLVDPLQGED--VQKLKAQLLYRAGRYEEAAALYEALLARARSTLKEKKQPTATSRWRLPGITSRTTQSASPVTAAELEHLTSAVNELATNAMASMILARKHVKLPSVQEGLRPSYEIEYNAACSHIVLNDLEQAAVCLEKAEALINSELDEED---DDIEEATAPLFVQQAFLNHMAGNIEEAKQSYYDVVNGRRCDAASLAVAANNLTVAIGQLALGKSTLSIAQDGTRALSKEQHEALVEGLKKMKTTASKNVVRKLTSHQREAMSRNRAILFVQLGRLDACRSEIE-MLKGHHSDDALVCLLEASLCAKNGKLENADKLLSEAADTPIVRAARV-----QLAASHGQKQKAAELLQELFPDSAAAVCTAA--SLLEQCSHVEDGISFLK---RFESKASGDLKTSARRELAAMLLRNGLYRESAETLQSCSRGSSDDTLIIAQLVVSTSHFDPDEAGRIALALPGAHLHITEEDAARLEQLPPPKRKHLSNRMAEPALDVLDKIPKANRRRD---------KKKSKKKRLPKNYDPNGPPPDPERWLPKTLRSGYRKKKVKRDQPF-RGSQGADAASAETAAQSMANKSNSK-ASSVPT--NVLPPRNRPRIQRKKK 695
            EL +  +  +YD  L  VN+    NK+  ++        +A   IHL   ++A+  ++  +   +        + +AY  +  N R++EA D +  L+  +   ++L AQ+LYR  RY E   LY+ L+       +E++                                     E   +A  S +  +K  +  +  +    +YE+ YN+AC  I      +A   L+  E L   +L+E D   D+IE     + VQ A++  + G  + A + Y  V+  +  D A+ AVA+NN+                       ++K+Q+  + +  KK+KT  ++N+  KLTS QR+ ++ N  +L +   +LD CR  I+ M +   S  A   LL A+L  +  K++ A  +L E A     ++  +     QL  + G   +A + L+ +   +     T+A  +L +     +  ++ L+   ++  K      ++   E A + L+ G  +E+A+ L+   +    D   +AQL+ + S F+P +A  ++  LP A     + D   LE          S  M    +    K+  ++ ++D         KKK KK +LPKNYDP   P DPERWLP+  RS Y+KKK KR     +G+QGA A S +T        + S  AS++PT  NV  PR     Q+KKK
Sbjct:   14 ELLRAGDNGEYDKALKIVNKIIHENKEDKKA-----HHCKAVCHIHLSEFEDALKVLDKNVPEAN--------FERAYCLYRLN-RVQEAHDKLKSLKDPNGKEKELLAQVLYRLERYPECFELYKELIKNTDDDFEEER-------------------------------------ETNLSACVSNLFDQKGKEFKNAPQLREHTYELSYNSACILINQGLYAEAIEKLKVTEELCKKQLEENDATEDEIEAELGVIRVQHAYVIQLLGKNDRAMKLYNQVLKSKPSDVATAAVASNNVVT---------------------INKDQN--VFDSKKKIKTATAENLDTKLTSKQRQTIAMNNCLLLLHTNQLDQCRKSIQSMSEKFPSCAAETALLMAALYCREKKVQKAVDVLKEFASAHPEQSLTLSFTLAQLLLAQGHVSQACDTLRAMGDVTYTLGVTSALVTLYQSMEDKDSAVTVLQWAIKWHRKNKSPALSTLIHETAKIQLKGGRPQEAAKLLEELRKEDPSDLKTLAQLISALSQFNPTKAKEVSKQLPPAEELTAQVDVDNLEST--------SWTMGAKYIKRSGKVEPSSGKQDTGDGLIQKKKKKHKKGKLPKNYDPTVDP-DPERWLPRRERSTYKKKKDKRGGGIGKGTQGAMANSEDTGKSPNPQAAQSPGASNIPTSPNVQGPRQVKGGQKKKK 642          
BLAST of Gvermi5730.t1 vs. uniprot
Match: UPI0006263D5B (signal recognition particle subunit SRP72 n=1 Tax=Orussus abietinus TaxID=222816 RepID=UPI0006263D5B)

HSP 1 Score: 155 bits (391), Expect = 4.670e-36
Identity = 176/676 (26.04%), Postives = 312/676 (46.15%), Query Frame = 0
Query:   13 ELQQLFNKAQYDAVLTRVNQFQKRNKKRSQSVGHILDAARAFSLIHLGRSDEAIPCIEALLQSESPPFKQQILYAKAYAAWATNERLEEAIDLVDPLQGED--VQKLKAQLLYRAGRYEEAAALYEALLARARSTLKEKKQPTATSRWRLPGITSRTTQSASPVTAAELEHLTSAVNELATNAMASMILARKHVKLPSVQEGLRPSYEIEYNAACSHIVLNDLEQAAVCLEK------AEALINSELDEED---DDIEEATAPLFVQQAFLNHMAGNIEEAKQSYYDVVNGRRCDAASLAVAANNLTVAIGQLALGKSTLSIAQDGTRALSKEQHEALVEGLKKMKTTASKNVVRKLTSHQREAMSRNRAILFVQLGRLDACRSEIEMLKGHHSD---DALVCLLEASLCAKNGKLENADKLLSEAA---DTPIVRAARVQLAASHGQKQKAAELLQEL------FPDSAAAVCT---AASLLEQCSHV-EDGISFLKRFESKASGDLKTSARRELAAMLLRNGLYRESAETLQSCSRGSSDDTLIIAQLVVSTSHFDPDEAGRIALALPGAHLHITEEDAARLEQLPPPKRKHLSNRMAE-----PALDVLDKIPKANRRRDKKKSKKKRLPKNYDPNGPPPDPERWLPKTLRSGYRKKKVKR--DQPFRGSQGA 654
            EL +L   ++Y+  L   N+    +++   +        +    I LGR  EA+  I        P     +++ KAYA +  NE + EA+ +VD +Q     +++LKAQ+LYR  RYEE  ++Y  ++  +    +++++                             +L + +  LA   +         +++P+++E    +YE  YNAAC  +     E   + +E       AE +    L+E++   + ++E  A + VQ A+   + G  +EA+  Y   +     D A  AVA NNL                       L+K+Q+  + +  K+MK+   + +  +LTS QR  ++ N+ +L + + + D C+   + L   + +   DA+   ++A   +K  K + A K+++E A       ++   +Q+  +HG++ +A ++L+ L       P   +A+ T   A +  ++ S V +D +++ K+   +  G+L+T  R + A   LR+G     A +L+     S  DT I+AQLV++ + FD   A  ++  LP  H      +   LE         +  R  E     PA D++       R+R KK+ +K +LPK YDPN PP DPERWLP+  RSGYRKK+ +R  D   +G+QGA
Sbjct:   14 ELNKLGQSSEYERALKTANKILTISEEEEPAFH-----CKIVCFIQLGRFKEALQSI-----LNFPKQLANLVFEKAYALYRLNE-VTEALKVVDSVQNPSLRIKELKAQILYRLERYEECFSVYRDIIKNSNDEYEDERET----------------------------NLAAVIANLAAEGL--------DLEVPTLKEN---TYEQVYNAACQLVSQATCESKELLIEAENKLKMAEKMCRESLEEDEVPLEKVDEEIAIIKVQLAYCLQLQGREKEAQALYSAALKSSPSDIALNAVANNNLLT---------------------LNKDQN--IFDSKKRMKSAFQEGLEHRLTSKQRRTIAYNQCLLALYVNQGDRCQQLCDKLATQYPELTSDAM--FVKALQMSKEDKTKEAVKIINEHAFGEHQLQMKLNCIQVLLNHGERHEAIKVLESLNEKDKSLPGIVSALVTFYMAENNRQRASSVLKDAVNYYKK-NKEMGGNLETLWR-QAADFHLRSGEVEVVAASLEELLHASPSDTKILAQLVIAYAQFDSARAQLLSKRLPPLHDLAETVNVDALESSNWIIGTKVIKRKVEASPGTPATDLI-------RKRIKKRKRKGKLPKTYDPNVPP-DPERWLPRHERSGYRKKRDRRNRDSAMKGTQGA 604          
The following BLAST results are available for this feature:
BLAST of Gvermi5730.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3ILL2_9FLOR3.320e-30466.90Signal recognition particle subunit SRP72 n=1 Tax=... [more]
R7QSM7_CHOCR3.850e-12639.97Signal recognition particle subunit SRP72 n=1 Tax=... [more]
A0A7S0BI04_9RHOD6.080e-4532.93Signal recognition particle subunit SRP72 n=1 Tax=... [more]
A9THX6_PHYPA6.430e-4230.35Signal recognition particle subunit SRP72 n=1 Tax=... [more]
A0A1S3K477_LINUN6.290e-3927.74Signal recognition particle subunit SRP72 n=1 Tax=... [more]
UPI000994EA8B6.350e-3926.85signal recognition particle subunit SRP72 n=1 Tax=... [more]
A0A7S1TBR2_9RHOD5.850e-3826.77Signal recognition particle subunit SRP72 n=1 Tax=... [more]
A0A6P6TL77_COFAR1.050e-3727.75Signal recognition particle subunit SRP72 n=3 Tax=... [more]
UPI001C71C42B3.230e-3625.98signal recognition particle subunit SRP72 n=1 Tax=... [more]
UPI0006263D5B4.670e-3626.04signal recognition particle subunit SRP72 n=1 Tax=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 8..157
e-value: 3.5E-16
score: 61.4
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 368..541
e-value: 9.4E-7
score: 30.6
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 113..290
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 51..141
IPR026270Signal recognition particle, SRP72 subunitPIRSFPIRSF038922SRP72coord: 3..698
e-value: 1.4E-83
score: 279.6
IPR026270Signal recognition particle, SRP72 subunitPANTHERPTHR14094SIGNAL RECOGNITION PARTICLE 72coord: 9..697
IPR013699Signal recognition particle, SRP72 subunit, RNA-bindingPFAMPF08492SRP72coord: 599..639
e-value: 3.2E-12
score: 46.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 657..682
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 570..698
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 570..584

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_776contigScGOVlb_776:1305897..1307993 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi5730.t1Gvermi5730.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_776 1305897..1307993 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi5730.t1 ID=Gvermi5730.t1|Name=Gvermi5730.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=699bp
MTASELQDGAVDELQQLFNKAQYDAVLTRVNQFQKRNKKRSQSVGHILDA
ARAFSLIHLGRSDEAIPCIEALLQSESPPFKQQILYAKAYAAWATNERLE
EAIDLVDPLQGEDVQKLKAQLLYRAGRYEEAAALYEALLARARSTLKEKK
QPTATSRWRLPGITSRTTQSASPVTAAELEHLTSAVNELATNAMASMILA
RKHVKLPSVQEGLRPSYEIEYNAACSHIVLNDLEQAAVCLEKAEALINSE
LDEEDDDIEEATAPLFVQQAFLNHMAGNIEEAKQSYYDVVNGRRCDAASL
AVAANNLTVAIGQLALGKSTLSIAQDGTRALSKEQHEALVEGLKKMKTTA
SKNVVRKLTSHQREAMSRNRAILFVQLGRLDACRSEIEMLKGHHSDDALV
CLLEASLCAKNGKLENADKLLSEAADTPIVRAARVQLAASHGQKQKAAEL
LQELFPDSAAAVCTAASLLEQCSHVEDGISFLKRFESKASGDLKTSARRE
LAAMLLRNGLYRESAETLQSCSRGSSDDTLIIAQLVVSTSHFDPDEAGRI
ALALPGAHLHITEEDAARLEQLPPPKRKHLSNRMAEPALDVLDKIPKANR
RRDKKKSKKKRLPKNYDPNGPPPDPERWLPKTLRSGYRKKKVKRDQPFRG
SQGADAASAETAAQSMANKSNSKASSVPTNVLPPRNRPRIQRKKKGRK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR026270SRP72
IPR013699Signal_recog_part_SRP72_RNA-bd