Gvermi5699.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi5699.t1
Unique NameGvermi5699.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length309
Homology
BLAST of Gvermi5699.t1 vs. uniprot
Match: A0A2V3IX06_9FLOR (Surfeit locus protein 2 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IX06_9FLOR)

HSP 1 Score: 174 bits (440), Expect = 3.700e-48
Identity = 108/302 (35.76%), Postives = 168/302 (55.63%), Query Frame = 0
Query:    1 MLAKSDVVAYAQQHPDTTLLLSNGKLRFTQTGMEFPPHADSKTLETYATGRAYRRGVIKRMNEGYDFEQHLPYIVPHKYRNEKHFLFCTLTEKTLPRQKDVIINHTNGKRFKRRYEEAERDRLEKKERQANQNKKAQALKKNTPQLSGGTGSDEGEGDLIESRNVQG-VLEGLLSSEDEKEPEDIQMEDLSDAGSPMADALEEEKNEKTNKHQLKRAPKVRAGNYESDGQMFERFDSREPEAKGSPNGIQRTSSGVGTGGSGCGTPSSIKAREFASKKRRRPKTPIPKKLRQTRQKRKSEEM 301
            ML  S+   YA++HPD+T LL NGK+RF QTGMEFP +  +  L+ Y  G+A+RR V K++N+ Y+F+QH+PYI+PH ++++KHFL+CTLT  TLPR +DV++NHTNGKRFKRR++EAE+ RLE+++R+                          + + ++    +  VL+G+LSS+DE           +D+     +  EE++   T   Q   AP         + Q+ E  D  + E KG   G +  S              S+ + +  ++KR+R K  + KK+R+  Q+RK + M
Sbjct:   86 MLPTSEAAMYAKEHPDSTTLLPNGKIRFIQTGMEFPANVQTSALKAYVDGKAFRRAVAKKINDAYEFDQHVPYIIPHPHKDKKHFLYCTLTGCTLPRSRDVLVNHTNGKRFKRRFQEAEKKRLEREQRELKXXXXXXXXXXXXXXXXXXXXXXXKDDEPMDDGTKENDVLDGILSSDDES----------ADSSDDEGEGKEEDETFWTRGKQRTEAPS-------DEDQIMEDEDDFQREQKGQQEGSKSNSE----------NNLSLLSIKQRARKRQREKMKLQKKVRRDAQRRKRDAM 360          
BLAST of Gvermi5699.t1 vs. uniprot
Match: R7Q9F3_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q9F3_CHOCR)

HSP 1 Score: 162 bits (411), Expect = 2.350e-43
Identity = 123/336 (36.61%), Postives = 167/336 (49.70%), Query Frame = 0
Query:    1 MLAKSDVVAYAQQHPDTTLLLSNGKLRFTQTGMEFPPHADSKTLETYATGRAYRRGVIKRMNEGYDFEQHLPYIVPHKYRNEKHFLFCTLTEKTLPRQKDVIINHTNGKRFKRRYEEAERDRLEKKERQANQNKKAQALKKNTPQLSGGT---GSDEGEGDLIESRNVQGVLEGLLSSEDEKEPEDIQMEDLSDAGSPMADALEEEKNEKTNKHQLKRAPKV-----RAGNYESDGQMFERFDSREPEA---------KGSPNGIQ-----RTSSGVGTGGSGCGTPSSI---------------KAREFASKKRRRPKTPIPKKLRQTRQKRKSE 299
            M ++SDV  YA +HP +T LL +GKL+FT++GMEF      K LE YA G AY+R +  + NEGYDF QH PY+VPHK++++ HFLFC LT   LPR+KDV+I H NGKRF+R+++EA+R R E     A + +K  A  K+  +  G     G  E        +    +L+G+LS  DE            D G    DA  + K E T   +++ APK      R    E DG +F     R   A           S NG++     R S     GG      S I               +  E A+KKR R +   PKK R+ RQ+RKS+
Sbjct:   91 MPSQSDVARYAAKHPSSTTLLPSGKLQFTKSGMEFAAMTSGKVLEAYANGLAYKRALQLKANEGYDFAQHEPYVVPHKHKDKNHFLFCKLTSSVLPRRKDVVIGHVNGKRFQRKFKEADRQREEAARIAAKRKEKKLARAKSMGKKEGENHNGGEGENXXXXXXXKEAPDLLDGILSDADE------------DMGDGDEDANNDGKEEDTGDEEMEEAPKQTKLDERISEDEKDGAVFWTRGRRRARAAANRDAATRNASENGMEEGITIRKSRSKAKGGKRVVPSSEITMGANDDAAAASNGHQEGEVATKKRLRSEK-APKKARRPRQRRKSD 413          
BLAST of Gvermi5699.t1 vs. uniprot
Match: A0A7S4C1H0_CHRCT (Hypothetical protein (Fragment) n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4C1H0_CHRCT)

HSP 1 Score: 77.0 bits (188), Expect = 5.430e-13
Identity = 48/119 (40.34%), Postives = 67/119 (56.30%), Query Frame = 0
Query:    6 DVVAYAQQHPDTTLLLSNGKLRFTQTGMEFPPHADSKTLETYATGRAYRRGVIKRMNEGYDFEQHLPYIVPHKYRNEKHFLFCTLTEKTLPRQKDVIINHTNGKRFKRRYEEAERDRLE 124
            DV ++   H D  +L S GK+R T TG E    AD   L+ Y TG+ Y++ V  +    YDF+QHLP+IVPH      H L+CTLT + + RQ   +  H +  +FKR  E AE+ R +
Sbjct:    6 DVSSFVAAHDDAEVLPS-GKIRCTSTGHEVV--ADLSLLQAYWTGKRYKKQVALK---AYDFDQHLPWIVPHT--KNPHLLYCTLTRRPISRQPKTVEGHVSSLKFKRLLE-AEKQRAQ 115          
BLAST of Gvermi5699.t1 vs. uniprot
Match: Q22TK7_TETTS (Surfeit locus protein n=1 Tax=Tetrahymena thermophila (strain SB210) TaxID=312017 RepID=Q22TK7_TETTS)

HSP 1 Score: 67.0 bits (162), Expect = 6.060e-9
Identity = 36/94 (38.30%), Postives = 55/94 (58.51%), Query Frame = 0
Query:   20 LLSNGKLRFTQTGMEFPPHADSKTLETYATGRAYRRGVIKRMNEGYDFEQHLPYIVPHKYRNEKHFLFCTLTEKTLPRQKDVIINHTNGKRFKR 113
            +L NGK+R   T  E  P  D      Y   + Y++ + K     +DF+Q+ P+IVP K   E+HFL+C LT+  +PR K+VI+ H  GK+++R
Sbjct:   17 ILENGKIRCKLTNHEMNP--DVSKYNEYIKSKGYQKAIEK----DFDFDQYKPHIVPFK-GAEEHFLWCHLTQTKVPRMKNVILRHVEGKKYQR 103          
The following BLAST results are available for this feature:
BLAST of Gvermi5699.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3IX06_9FLOR3.700e-4835.76Surfeit locus protein 2 n=1 Tax=Gracilariopsis cho... [more]
R7Q9F3_CHOCR2.350e-4336.61Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A7S4C1H0_CHRCT5.430e-1340.34Hypothetical protein (Fragment) n=1 Tax=Chrysotila... [more]
Q22TK7_TETTS6.060e-938.30Surfeit locus protein n=1 Tax=Tetrahymena thermoph... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 108..140
NoneNo IPR availableCOILSCoilCoilcoord: 196..216
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 135..150
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 197..212
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 273..292
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 113..134
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 245..264
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 293..308
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 113..308
NoneNo IPR availablePANTHERPTHR34348SURFEIT LOCUS PROTEIN 2coord: 4..299
IPR008833Surfeit locus protein 2PFAMPF05477SURF2coord: 6..209
e-value: 7.5E-22
score: 78.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_776contigScGOVlb_776:1092567..1093493 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi5699.t1Gvermi5699.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_776 1092567..1093493 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi5699.t1 ID=Gvermi5699.t1|Name=Gvermi5699.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=309bp
MLAKSDVVAYAQQHPDTTLLLSNGKLRFTQTGMEFPPHADSKTLETYATG
RAYRRGVIKRMNEGYDFEQHLPYIVPHKYRNEKHFLFCTLTEKTLPRQKD
VIINHTNGKRFKRRYEEAERDRLEKKERQANQNKKAQALKKNTPQLSGGT
GSDEGEGDLIESRNVQGVLEGLLSSEDEKEPEDIQMEDLSDAGSPMADAL
EEEKNEKTNKHQLKRAPKVRAGNYESDGQMFERFDSREPEAKGSPNGIQR
TSSGVGTGGSGCGTPSSIKAREFASKKRRRPKTPIPKKLRQTRQKRKSEE
MGTSAENG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008833Surf2