Gvermi5662.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi5662.t1
Unique NameGvermi5662.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length376
Homology
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BLAST of Gvermi5662.t1 vs. uniprot
Match: A0A2V3IVN7_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IVN7_9FLOR)

HSP 1 Score: 366 bits (939), Expect = 5.410e-122
Identity = 187/343 (54.52%), Postives = 240/343 (69.97%), Query Frame = 0 
Query:   27 CAAHLHKLTRSQYLQYRQSADLPTTSPTPSAXXXXTTASSLTVVFIPSFQGTLLRHAQSELPLFLAPLSRDHFQWIYQLLLSDRTTVVDDEHAVEYAAISCDAYGAHFSHCLSLPSTGPLARLRSKYRVRALGYDWRQTSQTILDGAFAQRLAHALQCDQCVLVAHGSACPLLRLALDERPDVRAASACIAPVSPRVANLTAAGDGLMPVGDAHKFSDCMKSVRERPIDYGSMAVELGMLPNRRGRSALPHVEGPDYSEEPMVPKDQRRRLAAAFDAVAQLGRGGRGVVDVCVEGSGVVVDVDGEMVDGDGVVERGACAGLARRVVSVEAGHLDIVRMVDAVV 369
            C+ H  KLTRSQY   R S D  + + +PS        S++ +VFIPSFQGTLL++ + +LPLFL+PLSR  ++ +Y+LL S++T  V  E+AVEYA   C     HFSHC+S+P  G ++ L+ KYRV++LGYDWRQT QTI +G F + +  AL+CDQCV++AHGS C LLR A    P VR+ +ACIAP + R A+ T  GDGL   G+AH   DCM+SVRER ID+GSMA ELGML  R+GRSALP VEG DY E  MV K +R RL  +FDA+ +LG     V+ VCVEG G V  VDG  +DGDGVVE+G+C G+A +V+SV+A HLD+VRMVDA V
Sbjct:   26 CSGHFLKLTRSQYTHLRSSGDYSSLTSSPSPRTAPLLKSNVQIVFIPSFQGTLLQNTEYQLPLFLSPLSRTSYKRVYELLRSEQTHAVTGEYAVEYAHYGCKNNSGHFSHCMSVPLRGAVSHLKEKYRVQSLGYDWRQTRQTIYNGGFGEEIRQALKCDQCVIIAHGSGCSLLRYAAGREPIVRSTTACIAPATARTASATKQGDGLATAGNAHTIGDCMRSVRERKIDFGSMAGELGMLRGRKGRSALPAVEGLDYEEVRMVSKQERARLLRSFDAIRELGVNDGAVLHVCVEGLGQVTRVDGIEMDGDGVVEKGSCRGVANQVLSVQARHLDLVRMVDAAV 368
The following BLAST results are available for this feature:
BLAST of Gvermi5662.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IVN7_9FLOR5.410e-12254.52Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..29
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 22..29
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 30..375
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..21

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_776contigScGOVlb_776:934666..935793 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi5662.t1Gvermi5662.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_776 934666..935793 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi5662.t1 ID=Gvermi5662.t1|Name=Gvermi5662.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=376bp
MRLLPAAAAASLTLALFAALSSAPHLCAAHLHKLTRSQYLQYRQSADLPT
TSPTPSATASATTASSLTVVFIPSFQGTLLRHAQSELPLFLAPLSRDHFQ
WIYQLLLSDRTTVVDDEHAVEYAAISCDAYGAHFSHCLSLPSTGPLARLR
SKYRVRALGYDWRQTSQTILDGAFAQRLAHALQCDQCVLVAHGSACPLLR
LALDERPDVRAASACIAPVSPRVANLTAAGDGLMPVGDAHKFSDCMKSVR
ERPIDYGSMAVELGMLPNRRGRSALPHVEGPDYSEEPMVPKDQRRRLAAA
FDAVAQLGRGGRGVVDVCVEGSGVVVDVDGEMVDGDGVVERGACAGLARR
VVSVEAGHLDIVRMVDAVVHQLKTG*
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