Gvermi5635.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi5635.t1
Unique NameGvermi5635.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length324
Homology
BLAST of Gvermi5635.t1 vs. uniprot
Match: A0A2V3IG45_9FLOR (Bifunctional uridylyltransferase/uridylyl-removing enzyme n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IG45_9FLOR)

HSP 1 Score: 500 bits (1287), Expect = 5.940e-176
Identity = 244/318 (76.73%), Postives = 276/318 (86.79%), Query Frame = 0
Query:    1 LRTQVYAPDDDDVCTFGEECCIPEDVVRASPALDHLLHKYVLPVREHNTQVFFDNALSPAHTLMLVFARDRHGLVLDVVSVLKALGVRVHRTASGESDALQLVLHRIEGELRSVRALGLSLSNCVAFWLSDERGADKI-DDGARLDQLTTCVKLELNTPHPRPRPASERDWHRISVQKNRADRFSVFSVQTADRPRLLAELTNAFAAAHIDVASATINTFSDRVENTFFVTKHGFKQPLCEHDIKLALRNVARALLKVGRREPHETLWYQVRDGTAVVIAEAIFIDEVNNRELEMLRFSHFETPNFRGRLPDVPYCPI 317
            L TQ+Y P+DD +CTFG+EC + EDVV++SPALDHL+ KYV P+REHNTQVFFDN+L   HTLM+VFA DRHGLVLDVVSVLKAL VRVHRT SGE+DAL+ +L RIEGELRSV ALGLSLSNCVAFW++DE   +KI DDG RLDQLTTCVKLELNTP+PRPRPA E  WHR+S+QKNR DR+SVFSVQT DRPRLLAELT+AFAA +ID+ASATI TF++RVENTFFVTK GFK+PL + DIKLA+  V  ALLKVG ++P ETLWYQVRDGTAV+IAEAIFIDEVNNREL M RFS FETPNFRGRLPD PY PI
Sbjct:   40 LSTQIYGPEDD-ICTFGDECALSEDVVKSSPALDHLVQKYVFPMREHNTQVFFDNSLHDQHTLMIVFAEDRHGLVLDVVSVLKALSVRVHRTTSGENDALRFMLCRIEGELRSVAALGLSLSNCVAFWITDESTGEKIFDDGVRLDQLTTCVKLELNTPYPRPRPAREHSWHRLSIQKNRNDRYSVFSVQTTDRPRLLAELTDAFAAINIDIASATIKTFTERVENTFFVTKRGFKEPLQDTDIKLAMERVLAALLKVGDKQPTETLWYQVRDGTAVIIAEAIFIDEVNNRELAMFRFSQFETPNFRGRLPDAPYRPI 356          
BLAST of Gvermi5635.t1 vs. uniprot
Match: A0A1X6P4U7_PORUM (ACT domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P4U7_PORUM)

HSP 1 Score: 267 bits (683), Expect = 6.270e-84
Identity = 137/287 (47.74%), Postives = 192/287 (66.90%), Query Frame = 0
Query:   37 LHKYVLPVREHNTQVFFDNALSPAHTLMLVFARDRHGLVLDVVSVLKALGVRVHRTASGESDALQLVLHRIEGELRSVRALGLSLSNCVAFWLSDERGADKIDDGARLDQLTTCVKLELNTPHPRPRPASERDWHRISVQKNRADRFSVFSVQTADRPRLLAELTNAFAAAHIDVASATINTFSDRVENTFFVTKHGFKQPLCEHDIKLALRNVARALLKVGRREPH--ETLWYQVRDGTAVVIAEAIFIDEVNNRELEMLRFSHFETPNFRGRLPDVPYCPIHLHD 321
            L+KYV P+R+ NT VFFD+  S   T+MLVF  DRHGL+LD+VSVLKAL +R HR  + E D+L L++ R+EGEL S++ LGL  SN VA  ++DE    K+ D A+L+Q+ TC++LEL +P+PRP P    D+HR+  ++ RA R+S+ +VQT DRPRLLA  +   +   +DV+SATI T   RVEN+F+V     K PL +  +  A+  V RAL      +    E+LW+Q R+G  +V+ EA+FID V+N EL+   FS +ETPNFRGRLP+ PY  + + +
Sbjct:   96 LNKYVFPMRDTNTTVFFDHNASAKTTVMLVFTHDRHGLILDLVSVLKALDIRCHRYLTTEDDSLALIMARLEGELLSIKGLGLKTSNTVALHITDELTGLKVQDEAKLEQIRTCIRLELKSPYPRP-PVGTLDFHRVVAERVRAGRYSILTVQTTDRPRLLARTSGYLSLIGVDVSSATIRTLGSRVENSFYVVDSNTKGPLSDEALDRAVEAVLRALRVCCPDDECVVESLWFQRREGHCLVVTEAVFIDMVDNAELQA--FSKYETPNFRGRLPNAPYMEVTVEE 379          
BLAST of Gvermi5635.t1 vs. uniprot
Match: A0A6T6CDN1_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A6T6CDN1_9RHOD)

HSP 1 Score: 198 bits (503), Expect = 1.290e-57
Identity = 114/290 (39.31%), Postives = 179/290 (61.72%), Query Frame = 0
Query:   27 VRASPALDHLLHKYVLPVREHNTQVFFDNALSPAHTLMLVFARDRHGLVLDVVSVLKALGVRVHRTASGESDALQLVLHRIEGELRSVRALGLSLSNCVAFWLSDERGADKIDDGARLDQLTTCVKLELNTPHPRPRPASERDWHRISVQKNRADRFSVFSVQTADRPRLLAELTNAFAAAHIDVASATINTFSDRVENTFFVTKHGFKQPLCEHDI-KLALRNVARALLKVGRREPHETLWYQVRDGTAVVIAEAIFID-EVNNRELEMLRFSHFETPNFRGRLPDVPY 314
            V A+PA+     KYVLP+R++N++VFFD+   P  ++M+V  RDRHGLVLDVVSVL  LG+RV R    E+D L L+  R+E EL  +  LG+S  N +AF++++E G+ K++   RL  + T +K EL+  +PRP+ A+E +WHR+ V +NR    S  S   A   +L +   + FA A ++V  +++ +   R ENT+FVT++G  +PL E  + ++A +     L  +     ++ +WYQ R    + +AEAI +D  +   +  ++ +  +ETPNFRGRLPD+PY
Sbjct:   50 VLANPAVTGERSKYVLPLRDYNSEVFFDHGRDPNASVMMVLCRDRHGLVLDVVSVLIGLGLRVVRVCDAEADCLPLLFQRMETELVELAQLGISTENVLAFFITEEDGS-KVECPDRLAWIETMIKRELSDKYPRPQVANE-NWHRVWVHQNRGRGMSSVSFSNAVVFQLDSLALDMFARAGVEVMGSSVKSGDARTENTYFVTQNG--KPLSEDRLFEVATQATTSVLSPLSTS--YQRVWYQARVFPHMAVAEAIVLDGSIIRTDSRLVNWEKYETPNFRGRLPDLPY 333          
BLAST of Gvermi5635.t1 vs. uniprot
Match: R7QAE7_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QAE7_CHOCR)

HSP 1 Score: 164 bits (415), Expect = 3.040e-47
Identity = 77/120 (64.17%), Postives = 93/120 (77.50%), Query Frame = 0
Query:  200 LTNAFAAAHIDVASATINTFSDRVENTFFVTKHGFKQPLCEHDIKLALRNVARALLKVGRREPHETLWYQVRDGTAVVIAEAIFIDEVNNRELEMLRFSHFETPNFRGRLPDVPYCPIHL 319
            ++ AFA   IDVASAT+ TF+ RVEN FFVTK GFK+PL   DI+ AL +V + LL VGR  P+ETLWYQ RDGT ++IAEAIFIDEVNN+EL   +FS FETPNFRGRLP+ PY P+ +
Sbjct:    1 MSKAFADVQIDVASATVKTFAKRVENHFFVTKQGFKEPLKAEDIEKALESVMKGLLSVGRPAPNETLWYQTRDGTEMMIAEAIFIDEVNNQELACFKFSQFETPNFRGRLPEAPYRPVSM 120          
BLAST of Gvermi5635.t1 vs. uniprot
Match: A0A2G1QT40_9HYPH (Bifunctional uridylyltransferase/uridylyl-removing enzyme n=2 Tax=Phyllobacteriaceae TaxID=69277 RepID=A0A2G1QT40_9HYPH)

HSP 1 Score: 59.7 bits (143), Expect = 3.560e-6
Identity = 34/79 (43.04%), Postives = 47/79 (59.49%), Query Frame = 0
Query:  175 VQKNRADRFSVFSVQTADRPRLLAELTNAFAAAHIDVASATINTFSDRVENTFFVTK---HGFKQPLCEHDIKLALRNV 250
            V+   + +FSV  V+  DRP LL+ELT A A   +D+ASA I TF ++V +TF+VT    H  + P  +  IK AL  V
Sbjct:  837 VRNTLSHKFSVIEVEGLDRPGLLSELTGAIADLSLDIASAHITTFGEKVVDTFYVTDLVGHKIENPTRQARIKAALTGV 915          
BLAST of Gvermi5635.t1 vs. uniprot
Match: A0A1U9JTH4_9HYPH (Bifunctional uridylyltransferase/uridylyl-removing enzyme n=1 Tax=Candidatus Tokpelaia hoelldoblerii TaxID=1902579 RepID=A0A1U9JTH4_9HYPH)

HSP 1 Score: 59.3 bits (142), Expect = 4.730e-6
Identity = 38/98 (38.78%), Postives = 55/98 (56.12%), Query Frame = 0
Query:  172 RISVQKNRADRFSVFSVQTADRPRLLAELTNAFAAAHIDVASATINTFSDRVENTFFVTKHGFKQPLCEHDIK--LALRNVARALLKVG---RREPHE 264
            R+ +  N +++FSV  ++  DRP LL+ELT   A   +D+ASA INTF ++V +TF+VT       L  H I      R + R LL V    ++E HE
Sbjct:  829 RVDINNNFSNKFSVLEIKGLDRPGLLSELTRVIADMALDIASAHINTFGEKVIDTFYVT------DLVGHKITDLQRQRTIKRRLLAVFAPVQKENHE 920          
BLAST of Gvermi5635.t1 vs. uniprot
Match: A0A527ZB65_9HYPH (ACT domain-containing protein (Fragment) n=1 Tax=Mesorhizobium sp. TaxID=1871066 RepID=A0A527ZB65_9HYPH)

HSP 1 Score: 55.1 bits (131), Expect = 4.800e-6
Identity = 26/59 (44.07%), Postives = 40/59 (67.80%), Query Frame = 0
Query:  172 RISVQKNRADRFSVFSVQTADRPRLLAELTNAFAAAHIDVASATINTFSDRVENTFFVT 230
            R  ++   ++RFSV  V+  DRP LL+E+T A +   +D+ASA I TF ++V +TF+VT
Sbjct:    4 RAEIRNTLSNRFSVIEVEGLDRPGLLSEITGALSDLSLDIASAHITTFGEKVIDTFYVT 62          
BLAST of Gvermi5635.t1 vs. uniprot
Match: A0A529I1E8_9HYPH (ACT domain-containing protein (Fragment) n=1 Tax=Mesorhizobium sp. TaxID=1871066 RepID=A0A529I1E8_9HYPH)

HSP 1 Score: 54.7 bits (130), Expect = 7.850e-6
Identity = 25/59 (42.37%), Postives = 40/59 (67.80%), Query Frame = 0
Query:  172 RISVQKNRADRFSVFSVQTADRPRLLAELTNAFAAAHIDVASATINTFSDRVENTFFVT 230
            R  ++   ++RFSV  ++  DRP LL+E+T A +   +D+ASA I TF ++V +TF+VT
Sbjct:   22 RAEIRNTLSNRFSVIEIEGLDRPGLLSEITGALSDLSLDIASAHITTFGEKVIDTFYVT 80          
BLAST of Gvermi5635.t1 vs. uniprot
Match: A0A522RCP1_9HYPH (ACT domain-containing protein (Fragment) n=1 Tax=Rhizobiaceae bacterium TaxID=1913961 RepID=A0A522RCP1_9HYPH)

HSP 1 Score: 54.3 bits (129), Expect = 9.200e-6
Identity = 24/58 (41.38%), Postives = 41/58 (70.69%), Query Frame = 0
Query:  173 ISVQKNRADRFSVFSVQTADRPRLLAELTNAFAAAHIDVASATINTFSDRVENTFFVT 230
            ++++   ++RFSV  V+  DRP LL+++T A +   +D+ASA I TF ++V +TF+VT
Sbjct:   14 VAIRNTLSNRFSVIEVECLDRPGLLSDVTGAISDLSLDIASAHITTFGEKVIDTFYVT 71          
The following BLAST results are available for this feature:
BLAST of Gvermi5635.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
A0A2V3IG45_9FLOR5.940e-17676.73Bifunctional uridylyltransferase/uridylyl-removing... [more]
A0A1X6P4U7_PORUM6.270e-8447.74ACT domain-containing protein n=1 Tax=Porphyra umb... [more]
A0A6T6CDN1_9RHOD1.290e-5739.31Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
R7QAE7_CHOCR3.040e-4764.17Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2G1QT40_9HYPH3.560e-643.04Bifunctional uridylyltransferase/uridylyl-removing... [more]
A0A1U9JTH4_9HYPH4.730e-638.78Bifunctional uridylyltransferase/uridylyl-removing... [more]
A0A527ZB65_9HYPH4.800e-644.07ACT domain-containing protein (Fragment) n=1 Tax=M... [more]
A0A529I1E8_9HYPH7.850e-642.37ACT domain-containing protein (Fragment) n=1 Tax=M... [more]
A0A522RCP1_9HYPH9.200e-641.38ACT domain-containing protein (Fragment) n=1 Tax=R... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010043Bifunctional uridylyltransferase/uridylyl-removing enzymePANTHERPTHR47320BIFUNCTIONAL URIDYLYLTRANSFERASE/URIDYLYL-REMOVING ENZYMEcoord: 171..249
coord: 42..90
IPR002912ACT domainPROSITEPS51671ACTcoord: 185..262
score: 13.361814
NoneNo IPR availableCDDcd04873ACT_UUR-ACR-likecoord: 62..91
e-value: 5.52585E-4
score: 35.9869
IPR045865ACT-like domainSUPERFAMILY55021ACT-likecoord: 182..231

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_776contigScGOVlb_776:824648..825619 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi5635.t1Gvermi5635.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_776 824648..825619 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi5635.t1 ID=Gvermi5635.t1|Name=Gvermi5635.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=324bp
LRTQVYAPDDDDVCTFGEECCIPEDVVRASPALDHLLHKYVLPVREHNTQ
VFFDNALSPAHTLMLVFARDRHGLVLDVVSVLKALGVRVHRTASGESDAL
QLVLHRIEGELRSVRALGLSLSNCVAFWLSDERGADKIDDGARLDQLTTC
VKLELNTPHPRPRPASERDWHRISVQKNRADRFSVFSVQTADRPRLLAEL
TNAFAAAHIDVASATINTFSDRVENTFFVTKHGFKQPLCEHDIKLALRNV
ARALLKVGRREPHETLWYQVRDGTAVVIAEAIFIDEVNNRELEMLRFSHF
ETPNFRGRLPDVPYCPIHLHDEQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010043UTase/UR
IPR002912ACT_dom
IPR045865ACT-like_dom_sf