Gvermi5612.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi5612.t1
Unique NameGvermi5612.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length209
Homology
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BLAST of Gvermi5612.t1 vs. uniprot
Match: A0A2V3IDS2_9FLOR (PRA1 family protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IDS2_9FLOR)

HSP 1 Score: 294 bits (753), Expect = 5.890e-99
Identity = 155/208 (74.52%), Postives = 178/208 (85.58%), Query Frame = 0 
Query:    1 MPASAPSPLPATQTNGPSPPAANVLRALTSIASLSQLSTALSKSVPALAPHTENAKTHVSALWTSAKPWAEFFNGKKFVPPASAAELQERLVDNLTYFSSNYLLCFLVFSTASVLVHPFSFLCIVMIVALYVFMFLHNVDALSIGPLRLTATSKKIAFAAVSFFLLYLTNAIGIIGSWALFGIILSLIHAACRVSAKEPDFDSPVHSV 208
            MPASAP P    Q +  S PA N+LRA+TS+ASLS +S+ALS SVPALAPHTE AK HVSALW+SAKPW EFFN KKF PP+S  ELQERL+DNLTYFSSNYLLCFL+ ST S+L+HP SFLCIV++VALYVFMFL N D L +GP+RLTA +K+IAF  ++F LLYLTNAIGIIGSWALFG+ILSLIHAACRVSAKEPDF+SPV+SV
Sbjct:    1 MPASAPPPSVPAQPSA-SAPAVNLLRAITSVASLSHVSSALSTSVPALAPHTEKAKVHVSALWSSAKPWTEFFNSKKFTPPSSPTELQERLMDNLTYFSSNYLLCFLILSTLSILIHPLSFLCIVVLVALYVFMFLQNPDTLKVGPVRLTANTKRIAFVGIAFILLYLTNAIGIIGSWALFGVILSLIHAACRVSAKEPDFESPVNSV 207
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BLAST of Gvermi5612.t1 vs. uniprot
Match: UPI001E8DC9BB (COPII vesicles protein Yip3 n=1 Tax=Talaromyces proteolyticus TaxID=1131652 RepID=UPI001E8DC9BB)

HSP 1 Score: 54.3 bits (129), Expect = 9.850e-6
Identity = 39/97 (40.21%), Postives = 57/97 (58.76%), Query Frame = 0 
Query:   57 THVSALWTSAKPWAEFFNGKKFVPPASAAELQERLVDNLTYFSSNYLLCFLVFSTASVLVHP-FSFLCIVMIVALYVFMFLHNVDALSIGPLRLTAT 152
            T +S+ + S KP +EFF+ K+   PA   E+Q R+  NL+YFSSNY L F++ S  S+L +P   F+ I++ V LY    L   D L +G  R T +
Sbjct:   25 TSMSSRFASLKPISEFFDLKRLSKPADFGEVQSRVNYNLSYFSSNYALVFVMLSIYSLLTNPVLLFVIILVTVGLYGIGKLEGRD-LDVGVFRATTS 120
The following BLAST results are available for this feature:
BLAST of Gvermi5612.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IDS2_9FLOR5.890e-9974.52PRA1 family protein n=1 Tax=Gracilariopsis chorda ... [more]
UPI001E8DC9BB9.850e-640.21COPII vesicles protein Yip3 n=1 Tax=Talaromyces pr... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004895Prenylated rab acceptor PRA1PFAMPF03208PRA1coord: 64..196
e-value: 6.3E-28
score: 97.2
IPR004895Prenylated rab acceptor PRA1PANTHERPTHR19317PRENYLATED RAB ACCEPTOR 1-RELATEDcoord: 41..196
NoneNo IPR availablePANTHERPTHR19317:SF0PRENYLATED RAB ACCEPTOR PROTEIN 1coord: 41..196
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 156..188
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 137..155
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..102
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 103..136
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 189..208
NoneNo IPR availableTMHMMTMhelixcoord: 114..136
NoneNo IPR availableTMHMMTMhelixcoord: 156..178

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_776contigScGOVlb_776:747855..748481 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi5612.t1Gvermi5612.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_776 747855..748481 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi5612.t1 ID=Gvermi5612.t1|Name=Gvermi5612.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=209bp
MPASAPSPLPATQTNGPSPPAANVLRALTSIASLSQLSTALSKSVPALAP
HTENAKTHVSALWTSAKPWAEFFNGKKFVPPASAAELQERLVDNLTYFSS
NYLLCFLVFSTASVLVHPFSFLCIVMIVALYVFMFLHNVDALSIGPLRLT
ATSKKIAFAAVSFFLLYLTNAIGIIGSWALFGIILSLIHAACRVSAKEPD
FDSPVHSV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004895Prenylated_rab_accept_PRA1