Gvermi5554.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi5554.t1
Unique NameGvermi5554.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length1109
Homology
BLAST of Gvermi5554.t1 vs. uniprot
Match: R7QQ57_CHOCR (DNMT1-RFD domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QQ57_CHOCR)

HSP 1 Score: 260 bits (664), Expect = 2.510e-69
Identity = 180/513 (35.09%), Postives = 277/513 (54.00%), Query Frame = 0
Query:  570 RTEITFSDPDLRICKDWEVFTTDAASLRDVINRFNKDEN--LPAMERTLVRGFSEHILPEIEQHEAKRRRE---MEKRNRAEFLMMNQKRSSRVQAIAERKERAAQKAAQKEEQLRFEEERIAVHNSRIAKSLAFEEKEQSQDIKLARKKYGLAEAVARDEE--EILKNEAETKKLIGVQ--VRRSSRTSKGRNSWKERAEESQDIMEEKPSAVKKEPETVVQTGKSHSEESLDKNMRTDQAWRSEESIEVEPRRNSSSNGFVSKAEKDATKNG---VISGSSKS---EAVDPSKEHVSLPNPGALLKDVERISSCPLETT---IGKAYQWDRNQEDGMPVYVLDKFFFAYRDDFGDAPLEESEYRGAEMFGLGILIPPLESSSQVSRVEIPSIMDWVIEYGSIPKLWVKSKHAWYELRRPAIEYREVFASARRKYELCVRIAILGETMRGTQLEYNSMVKFLSMRYGDMKSYKEAEVLEERFFIMSQMETLNRRSLLQSGFLKSLNKKIRED 1064
            R    F D DLR+C  WE+ +T ++ L  +I+RF  ++   LP+ E+ LVR   + ++PEI + E K R+E   +E++ R E     QKRSSRVQA+ E                      IA     +   +   +KEQS+ I+++R+ +G  +A+ RD+     +  EA  ++ I +Q  VRRS+RT +     ++        +E+   A     E + ++   HS++   + +    A    +++        ++ G+  K    A   G   VI    ++   +A D + E V     G  ++   +     L+T+   + +AY W  N +D  P+ VLDKFFFA + DF DAPLE  E   + + G G+L+PPL+S++    V I  ++DW IEYG  PKLWVKSK+AWYELR  + EYRE F S RRKYELC+R AILG T +  +L Y   V  LS RY +M+SY   ++L+E+ FI++QME+L RR +LQSGF++ L +KIR +
Sbjct:   85 RRNDVFDDLDLRVCNKWELISTGSSELEQLIDRFRSEKGGVLPS-EKALVRFLEDDLMPEILEREEKIRKEQERVERKMRHEASFSVQKRSSRVQALEEXXXXXXXXXXXXXXXXXXXXXEIAARAEALRSQVVSLQKEQSRSIRISRRAHGRTDAIDRDDRLRHKMDREAIKQEAIVIQGAVRRSTRTLRTSRRGQDLTTSPSPTVEDTKVAQNVLAEKMAESDPHHSKDETLQQLPG--ASNGNDAL-----LKGNNEGYTDKKPNHAEAGGREEVIHEGQENRSHQAADTTSEEVH--QSGEAVESSSKQDDTSLKTSEQCVEEAYTWSINPDDKEPIRVLDKFFFALKADFADAPLETCETSASPIIGFGVLLPPLKSAANARLVTIDEVIDWSIEYGIEPKLWVKSKYAWYELREASTEYREAFTSTRRKYELCIRTAILGATYKSAELTYGRAVDLLSYRYEEMQSYTTTDILKEKRFIVAQMESLGRRPVLQSGFVRELKRKIRAE 587          
BLAST of Gvermi5554.t1 vs. uniprot
Match: M2XZT4_GALSU (DNMT1-RFD domain-containing protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XZT4_GALSU)

HSP 1 Score: 122 bits (307), Expect = 8.720e-25
Identity = 74/189 (39.15%), Postives = 105/189 (55.56%), Query Frame = 0
Query:  881 QWDRNQEDGMPVYVLDKFFFAYRDDFGD-APLEESEYRGAEMFGL-GILIPPLESSSQV---SRVEIPSIMDWVIEYGSIPKLWVKSKHA-WYELRRPAIEYREVFASARRKYELCVRIAILGETMRGTQLEYNSMVKFLSMRYGDMKSYKEAEVLEERFFIMSQMETLNRRSLLQSGFLKSLNKKIRE 1063
            ++DR  ED    + L   F  Y    G    +E+ ++     F L  ILIP  E ++     +     +I DW IEYG  P+LW+KS +  WY+L+ P  EYR V+ + RRK+ELC RI IL  T+      Y+ +V+FLS  YG+MK Y E E+L E  FI+SQ  +LN   ++ SGF + L KK R+
Sbjct:  498 EYDRLLEDNSTKWRLVDRFALYSTRTGQMVAIEDLDHNDERPFVLEAILIPRQEGNNSPLMPAAFRCNNIQDWCIEYGMEPRLWLKSSNGIWYQLKDPYKEYRNVYQTTRRKFELCSRIYILCMTLSPLVCSYSKVVEFLSYAYGEMKPYTEDEILMEASFILSQFWSLNEGRIVHSGFFRHLQKKHRQ 686          
BLAST of Gvermi5554.t1 vs. uniprot
Match: A0A5J4YID4_PORPP (DNMT1-RFD domain-containing protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YID4_PORPP)

HSP 1 Score: 115 bits (288), Expect = 2.660e-22
Identity = 71/198 (35.86%), Postives = 105/198 (53.03%), Query Frame = 0
Query:  868 SSCPLETTIGKAYQWDRNQEDGMPVYVLDKF--FFAYRDDFGDAPL----EESEYRGAEMFGLGILIPPLESSSQVS--RVEIPSIMDWVIEYGSIPKLWVKSKHAWYELRRPAIEYREVFASARRKYELCVRIAILGETMRGTQLEYNSMVKFLSMRYGDMKSYKEAEVLEERFFIMSQMETLNRRSLLQSGFLKSL 1057
            S CP E        W     D  P  VLD F  F+A   D     +    E+  +    M   G L PP +S   V+   + I  I +WV++ G  P ++V++  AWY LRRP+ +Y+ VF +ARRK+E+  RI IL + +  +QL Y+ +V  L   Y +M+SYKEAEV+ E  F++ Q+  L  ++LL S  L+ L
Sbjct:  637 SECPAELN------WTSPSGDDGPERVLDNFRVFYAASGDLAKLEMADQVEDLVHGPRAMTVTGTLFPPPKSELTVAPRMIRICGIEEWVLDLGHDPIMYVRTASAWYRLRRPSKDYKWVFMTARRKFEVTARIFILADQLPLSQLRYDVVVPLLGASYTNMRSYKEAEVILEASFVVEQVRNLKHKALLNSQLLQKL 828          
BLAST of Gvermi5554.t1 vs. uniprot
Match: R7QU17_CHOCR (Bromo domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QU17_CHOCR)

HSP 1 Score: 108 bits (270), Expect = 5.210e-21
Identity = 53/122 (43.44%), Postives = 72/122 (59.02%), Query Frame = 0
Query:  939 RVEIPSIMDWVIEYGSIPKLWVKSKHAWYELRRPAIEYREVFASARRKYELCVRIAILGETMRGTQLEYNSMVKFLSMRYGDMKSYKEAEVLEERFFIMSQMETLNRRSLLQSGFLKSLNKK 1060
            RV+   +++W IEYG+ P LWV+S   WY L +PA EY      ARR++ELC RI ILG TM   +  YN +   L   Y  MK Y E E+L E+ FI++Q++ LN  +L    F+K L  K
Sbjct:   69 RVKTAPLIEWCIEYGNTPHLWVRSAAVWYRLTKPAKEYARTHELARRRFELCSRIFILGTTMSSKETTYNMITSLLQAPYLKMKGYSEKELLSEKDFILAQIKNLNDPALAAMTFIKELRDK 190          
BLAST of Gvermi5554.t1 vs. uniprot
Match: A0A2V3IL21_9FLOR (Transcription factor GTE10 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IL21_9FLOR)

HSP 1 Score: 108 bits (269), Expect = 6.890e-21
Identity = 61/180 (33.89%), Postives = 95/180 (52.78%), Query Frame = 0
Query:  882 WDRNQEDGMPVYVLDKFFFAYRDD-FGDAPLEESEYRGAEMFGLGILIPPLESSSQVSRVEIPSIMDWVIEYGSIPKLWVKSKHAWYELRRPAIEYREVFASARRKYELCVRIAILGETMRGTQLEYNSMVKFLSMRYGDMKSYKEAEVLEERFFIMSQMETLNRRSLLQSGFLKSLNKK 1060
            +D + ++ +P   L  F  A  DD      L+++      +   G L+   ++     +V    + +W IEY   P LWV++   WY L +PA EY     +ARR++ELC RI ILG TM  ++  Y   V+ LS  YG MK+Y E E+L E+ FI++Q++ L   SL    F++ L +K
Sbjct:   13 FDVSYDNKIPQRELTDFVVARGDDKLSICALDDATSHQQPVVARGTLLA--DNGRDTIKVISAPLKEWCIEYAQTPYLWVRTSDVWYRLLKPAKEYARTHETARRRFELCSRIFILGTTMNPSECTYKLFVQLLSGTYGKMKAYSEKELLLEKDFILAQIKNLRNESLSDIPFVRELREK 190          
BLAST of Gvermi5554.t1 vs. uniprot
Match: A0A7S1TIN9_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TIN9_9RHOD)

HSP 1 Score: 108 bits (269), Expect = 4.040e-20
Identity = 74/216 (34.26%), Postives = 112/216 (51.85%), Query Frame = 0
Query:  857 PGALLKDVERISSC----PLETTIGKAYQWDRNQEDGMPVYVLDKFFFAYRDDFGDAPLEESEYRGA--EMFGLGILIPPLESSSQVSRVEIPSIMDWVIEYGSIPKLWVKSKHAWYELRRPAIEYREVFASARRKYELCVRIAILGETMRGTQLEYNSMVKFLSMRYGDMKSYKEAEVLEERFFIMSQMETLNRRSLLQSGFLKSLNKKIREDKR 1066
            P    KD +    C    P E+ +   Y W  + E G+P   LD+F F   D    A +E+ +++G+  E+   G L+P      +  RV + SI +W I+YG  P +W++S+ AWY L +P   YR VF +ARRK+++CVRI  L  +   T L ++ +   L      MKSYK  +VL E  FI++Q+ +L    L  + F K L K+  E  R
Sbjct:  584 PSKFQKDDDEAKPCHFELPNESEVPTDYNWSMD-EQGIPSRKLDRFRFIDSDG-NVAKIEQLDWKGSRPEVIAEGSLLPAPGRGCKPGRVSLRSIREWCIDYGPEPGIWIRSELAWYRLIKPLKVYRWVFMTARRKFDICVRIYSLALSESQT-LSFDLVTSALGDPRPGMKSYKTNDVLIETDFILNQLGSLGG-GLRATPFAKELWKRRHERSR 795          
BLAST of Gvermi5554.t1 vs. uniprot
Match: A0A2V3J1U0_9FLOR (Phosphoglucan, water dikinase, chloroplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J1U0_9FLOR)

HSP 1 Score: 102 bits (253), Expect = 1.970e-19
Identity = 72/239 (30.13%), Postives = 115/239 (48.12%), Query Frame = 0
Query:  133 TITS-LLSRFCQKQVVVIGK----LPAPLPRATIYVVSRDEYVPPYCWHVPC-RQDPTEWSTALVLMGFDWRQSTVWLLRLPSASDAMLLEQLMTVAKLRAPCIVVLLFCWSSLVIEVADAAGFSVDKGHSSTPLYVLKREKRYDWYYETDSSYTSPLYSLPPEPEVD--VWVVQFALFRDGTPLGGSHMVSKGCAKVVGNCKELGLWDVRHGVQLEEVGEHWVAEVVFEKVESVQYNF 363
            +ITS LL R   +Q VV+      +  P     +YVV   +       +V      P+EW  AL L  FDWR+ + WLLRL + S+  L   L  VA L  P  VV+L     L +++A + GFS  +  S  P++VL R +R     +  S+  SP  S+     +      V+F L +   P    H + +G  +VVG  ++LG+W   + + L + G+ +VAE++     + +Y +
Sbjct:   85 SITSALLRRHATEQTVVMTPDSPPISPPQQHPLVYVVGEGDPFDEQSAYVRVPHSSPSEWPHALALAAFDWRRPSTWLLRLDNVSEPKLARHLKAVATLTPPSSVVILVSLKPLAVDIASSTGFSSHQPDSKQPVFVLHRNQRGVHTADVLSTLVSPATSVSSASTLSDSACFVRFTLEKSSLPASVLHRLPRGSLRVVGEKRQLGVWQPSNALALIDAGDVFVAELLLSSAHA-EYKY 322          
BLAST of Gvermi5554.t1 vs. uniprot
Match: A0A6T6KT97_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A6T6KT97_9RHOD)

HSP 1 Score: 90.1 bits (222), Expect = 6.060e-15
Identity = 48/155 (30.97%), Postives = 83/155 (53.55%), Query Frame = 0
Query:  926 ILIPPLESSSQVSRVEIPSIMDWVIEYGSIPKLWVKSKHAWYELRRPAIEYREVFASARRKYELCVRIAILGETMRGTQLEYNSMVKFLSMRYGDMKSYKEAEVLEERFFIMSQMETLNRRSLLQSGFLKSLNKKIREDKRREHLARARVRSQKH 1080
            I +  L  + +   V    +++W IEYGS P +++ +  A+Y L  P+ EY++ +A  RR +E+C R  I+   +      Y+++++ LS  YG MK+Y E E+L E  FI+ Q   L+  +L +S F   L K+    K ++   +   RS +H
Sbjct:   44 IALGTLTRNGRKCTVRTGPVLEWCIEYGSNPAVYLNTARAYYRLVNPSKEYQKTYAPTRRCFEICARAQIIASDVLPADATYSNIIELLSKPYGQMKAYSEKEILSETEFILDQAMALDD-NLYRSAFCVELKKRHENMKLKQPATKPHSRSTEH 197          
BLAST of Gvermi5554.t1 vs. uniprot
Match: A0A5J4Z2H8_PORPP (Transcription factor GTE10 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z2H8_PORPP)

HSP 1 Score: 90.5 bits (223), Expect = 7.630e-15
Identity = 44/113 (38.94%), Postives = 68/113 (60.18%), Query Frame = 0
Query:  945 IMDWVIEYGSIPKLWVKSKHAWYELRRPAIEYREVFASARRKYELCVRIAILGETMRGTQLEYNSMVKFLSMRYGDMKSYKEAEVLEERFFIMSQMETLNRRSLLQSGFLKSL 1057
            +++W IEYG  P L+V+++ AWY+L   A +Y + +   RR++E+C R  IL  +M   +  Y + +  LS  Y DMK Y E ++L+E  FI+ Q  +L+  SLL SGF   L
Sbjct:  170 LLEWCIEYGLNPALYVRTELAWYKLGAAAKDYTKTYTLTRRRFEICARAFILATSMDPREASYANFLSLLSHPYMDMKGYTERDILKEASFILDQAGSLDDPSLLTSGFCTEL 282          
BLAST of Gvermi5554.t1 vs. uniprot
Match: A0A7S2VW71_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Chlamydomonas chlamydogama TaxID=225041 RepID=A0A7S2VW71_9CHLO)

HSP 1 Score: 64.7 bits (156), Expect = 1.690e-8
Identity = 30/79 (37.97%), Postives = 46/79 (58.23%), Query Frame = 0
Query:  930 PLESSSQVSR--VEIPSIMDWVIEYGSIPKLWVKSKHAWYELRRPAIEYREVFASARRKYELCVRIAILGETMRGTQLE 1006
            PLE     ++  ++  +++DW+IEYGS P +WV +  AWY+L  PA +Y+  F  A+RK +LC R A   +   G   E
Sbjct:   63 PLEEHENDTQQPIQTEAVLDWMIEYGSKPCIWVSTAAAWYKLLAPAADYKATFQPAQRKLDLCSRAAAALQVNPGLSYE 141          
The following BLAST results are available for this feature:
BLAST of Gvermi5554.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
R7QQ57_CHOCR2.510e-6935.09DNMT1-RFD domain-containing protein n=1 Tax=Chondr... [more]
M2XZT4_GALSU8.720e-2539.15DNMT1-RFD domain-containing protein n=1 Tax=Galdie... [more]
A0A5J4YID4_PORPP2.660e-2235.86DNMT1-RFD domain-containing protein n=1 Tax=Porphy... [more]
R7QU17_CHOCR5.210e-2143.44Bromo domain-containing protein n=1 Tax=Chondrus c... [more]
A0A2V3IL21_9FLOR6.890e-2133.89Transcription factor GTE10 n=1 Tax=Gracilariopsis ... [more]
A0A7S1TIN9_9RHOD4.040e-2034.26Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A2V3J1U0_9FLOR1.970e-1930.13Phosphoglucan, water dikinase, chloroplastic n=1 T... [more]
A0A6T6KT97_9RHOD6.060e-1530.97Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A5J4Z2H8_PORPP7.630e-1538.94Transcription factor GTE10 n=1 Tax=Porphyridium pu... [more]
A0A7S2VW71_9CHLO1.690e-837.97Hypothetical protein (Fragment) n=1 Tax=Chlamydomo... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 658..692
NoneNo IPR availableCOILSCoilCoilcoord: 410..450
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 413..573
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1069..1096
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 751..813
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 750..851
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 476..498
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 110..129
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 508..539
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 413..456
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 114..128
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10Immunoglobulinscoord: 315..447
e-value: 2.0E-6
score: 29.5
IPR022702DNA (cytosine-5)-methyltransferase 1, replication foci domainPFAMPF12047DNMT1-RFDcoord: 940..1014
e-value: 4.1E-9
score: 36.6
IPR013784Carbohydrate-binding-like foldSUPERFAMILY49452Starch-binding domain-likecoord: 319..371

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_776contigScGOVlb_776:467179..477009 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi5554.t1Gvermi5554.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_776 467179..477009 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi5554.t1 ID=Gvermi5554.t1|Name=Gvermi5554.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=1109bp
MRSLLIEGIVRLFQSTFEDLYSLGFESSSSTGCHLEFCANAGRSSLPSAI
RQGLPSRPLAAKSSNLSGGGLGGWSCSELSGLEGTVRGSGGSVPRSSSSS
GSAVSYRAHTRWSEQEMSPSENRQKREQGLEQTITSLLSRFCQKQVVVIG
KLPAPLPRATIYVVSRDEYVPPYCWHVPCRQDPTEWSTALVLMGFDWRQS
TVWLLRLPSASDAMLLEQLMTVAKLRAPCIVVLLFCWSSLVIEVADAAGF
SVDKGHSSTPLYVLKREKRYDWYYETDSSYTSPLYSLPPEPEVDVWVVQF
ALFRDGTPLGGSHMVSKGCAKVVGNCKELGLWDVRHGVQLEEVGEHWVAE
VVFEKVESVQYNFAAYDVDQIRFAPFGTDAVGNAYWYFNDLERVYREPSQ
RAREKADRLIRSEQLARERESQRQEKAEKRRAAQQKKEEQRRRKEERRRR
NAEKWAPRVAASRVTRAARRAKESQMAQAADQSGQQEQPANGPSTRRKPK
TESAADEAEQAPSANGSSQRSRPVSSTESIPQADGFDQQDDQPATRGRRG
RRRKAQTDQTSQVAPKRPRRTEITFSDPDLRICKDWEVFTTDAASLRDVI
NRFNKDENLPAMERTLVRGFSEHILPEIEQHEAKRRREMEKRNRAEFLMM
NQKRSSRVQAIAERKERAAQKAAQKEEQLRFEEERIAVHNSRIAKSLAFE
EKEQSQDIKLARKKYGLAEAVARDEEEILKNEAETKKLIGVQVRRSSRTS
KGRNSWKERAEESQDIMEEKPSAVKKEPETVVQTGKSHSEESLDKNMRTD
QAWRSEESIEVEPRRNSSSNGFVSKAEKDATKNGVISGSSKSEAVDPSKE
HVSLPNPGALLKDVERISSCPLETTIGKAYQWDRNQEDGMPVYVLDKFFF
AYRDDFGDAPLEESEYRGAEMFGLGILIPPLESSSQVSRVEIPSIMDWVI
EYGSIPKLWVKSKHAWYELRRPAIEYREVFASARRKYELCVRIAILGETM
RGTQLEYNSMVKFLSMRYGDMKSYKEAEVLEERFFIMSQMETLNRRSLLQ
SGFLKSLNKKIREDKRREHLARARVRSQKHKDVTESQGDTKDESDSDIIG
CSNLQTVW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013783Ig-like_fold
IPR022702Cytosine_MeTrfase1_RFD
IPR013784Carb-bd-like_fold