Gvermi5539.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi5539.t1
Unique NameGvermi5539.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length286
Homology
BLAST of Gvermi5539.t1 vs. uniprot
Match: A0A2V3IS69_9FLOR (Vacuolar protein sorting-associated protein 13B n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IS69_9FLOR)

HSP 1 Score: 126 bits (316), Expect = 6.050e-29
Identity = 73/172 (42.44%), Postives = 108/172 (62.79%), Query Frame = 0
Query:    2 LRSFWQAVVSENADQIVDDVGIDCELANERKLGTEDLNEILHVDSVDQAKQRYAQEPDSVAAKAEILALQHFFRTLDRKALENVDLLQRKLDKENTLSFYLQDADRILRESRQRIRKVAAFAQKFLDRNEAPIKKLANLEIITLQNGKNKDAMIQQLEALLAKPEKLLHPML 173
            L SFWQA+VSE+ D  VDD      L+N+R    ED++    V+  D A+ ++A+E  + AA A  L ++   +T D +A   V+ LQ +L++E  +   LQDA+++L  + QRI++  A  Q+  DRNEA + +L +LE +T Q GKNKDAMI+Q+EA LAK E+ L  ML
Sbjct:  438 LSSFWQAIVSEDVDDTVDDAAYALGLSNDRPPEEEDVDMNPDVEEADHAESQFAREAVNAAAMAGGLTMKLVLKTPDHEAWNKVEKLQEELEEEKKVRTRLQDAEKVLHNAEQRIQEAEALIQRLRDRNEALVNELRDLENMTSQAGKNKDAMIRQMEAALAKAERNLQGML 609          
BLAST of Gvermi5539.t1 vs. uniprot
Match: R7QQH7_CHOCR (Chorein N-terminal domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QQH7_CHOCR)

HSP 1 Score: 95.9 bits (237), Expect = 1.590e-18
Identity = 58/168 (34.52%), Postives = 100/168 (59.52%), Query Frame = 0
Query:    2 LRSFWQAVVSENADQIVDDVGIDCELANERKLGTEDLNEILHVDSVDQAKQRYAQEPDSVAAKAEILALQHFFRTLDRKALENVDLLQRKLDKENTLSFYLQDADRILRESRQRIRKVAAFAQKFLDRNEAPIKKLANLEIITLQNGKNKDAMIQQLEALLAKPEKLL 169
            LRSFW+A+VSEN D+ VDD  I   L +   +  E++++         A  +YA++    AA A  L ++   +T D +A + VD L+ +L +E  +   L++ + +L E+ +R+R+    A+   +RN + ++++ +LE +T Q GKNKDAMI+Q+EA L+  E+ L
Sbjct:  440 LRSFWRAIVSENGDETVDDAAIALGLVD-GDISEEEVDDKYEEPEEQSADYQYARDVVQAAANAGGLTMKLRVKTPDTEAWDLVDSLREELKRERGVRRRLENLEHVLEEAEKRVRESEEDARALQERNTSLVQEVEDLEAMTSQAGKNKDAMIRQMEAALSNAERKL 606          
The following BLAST results are available for this feature:
BLAST of Gvermi5539.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IS69_9FLOR6.050e-2942.44Vacuolar protein sorting-associated protein 13B n=... [more]
R7QQH7_CHOCR1.590e-1834.52Chorein N-terminal domain-containing protein n=1 T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_776contigScGOVlb_776:200075..200932 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi5539.t1Gvermi5539.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_776 200075..200932 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi5539.t1 ID=Gvermi5539.t1|Name=Gvermi5539.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=286bp
MLRSFWQAVVSENADQIVDDVGIDCELANERKLGTEDLNEILHVDSVDQA
KQRYAQEPDSVAAKAEILALQHFFRTLDRKALENVDLLQRKLDKENTLSF
YLQDADRILRESRQRIRKVAAFAQKFLDRNEAPIKKLANLEIITLQNGKN
KDAMIQQLEALLAKPEKLLHPMLCKQSPKKLLTVRSQSRLGITLMEKTTK
VNRFFILPSEMASVRIFQVPVWGILRAILTRSRENLRQKCRQSCKEKKNP
RIKRILMPLTMLRKAKTSLHRRCSELQKTYLGFLV*
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