Gvermi5474.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi5474.t1
Unique NameGvermi5474.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length225
Homology
The following BLAST results are available for this feature:
BLAST of Gvermi5474.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.160.10.10Hexapeptide repeat proteinscoord: 1..164
e-value: 4.2E-8
score: 34.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 183..211
IPR011004Trimeric LpxA-like superfamilySUPERFAMILY51161Trimeric LpxA-like enzymescoord: 7..81

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24228contigScGOVlb_24228:2175431..2176105 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi5474.t1Gvermi5474.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24228 2175431..2176105 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi5474.t1 ID=Gvermi5474.t1|Name=Gvermi5474.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=225bp
MDTDAVLDADAVLGVDAVLGVDAVLGVDAVLGVDAVLGVDAVLGVDAVLG
VDAVLDDSAVLDDNAVLDAEAVLGTDAVLDAAADLDAAADLDADADLDAA
ADLDAGADLDADADFGADADLAADAAADLDAGTDADLDAAADLEAAADAD
LDAAVADREAAVGDLEAERAEAEGVIADVDAGGGSEAGALLTESEAEMED
DDSLDADCAVSERSQWQELDLAVG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011004Trimer_LpxA-like_sf