Gvermi5471.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male
|
Overview
Homology
BLAST of Gvermi5471.t1 vs. uniprot
Match: A0A2V3IZ75_9FLOR (Ribosomal RNA large subunit methyltransferase H n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZ75_9FLOR) HSP 1 Score: 180 bits (457), Expect = 5.890e-55 Identity = 91/158 (57.59%), Postives = 114/158 (72.15%), Query Frame = 0
Query: 5 HTTCVSIRSKLKVNIITIGKKNSKDAMYDCLASEYAKRMSRVITVHEKAVKHEAAVKLVHDLCPRESVMLMDENGDMPRNSKHFSEIVFAALEQGGSRLSIVIGDADGLPPELLAIAHPRIRKVSLSSLTFTHKMVRLFVYEQLYRATEIRKNSKYHK 162
H + +KLKV +ITIGK++ KDA++D L +EY KRMS VI E+VMLMDE+G MPR+S HFSE++FAALE+GGSRLS+++GDADGLP +L + + R++KVSLS LTFTHKM RLF+YEQLYRATEIR NSKYHK
Sbjct: 34 HAKSATFHAKLKVQLITIGKRSGKDAVFDPLVAEYTKRMSNVIXXXXXXXXXXXXXXXXXXXXXXEAVMLMDEHGPMPRDSIHFSEMIFAALERGGSRLSMIVGDADGLPLSVLEVQNSRVQKVSLSPLTFTHKMARLFIYEQLYRATEIRNNSKYHK 191
BLAST of Gvermi5471.t1 vs. uniprot
Match: A0A7S1PEQ6_9ALVE (Hypothetical protein n=3 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A7S1PEQ6_9ALVE) HSP 1 Score: 103 bits (257), Expect = 9.390e-25 Identity = 66/164 (40.24%), Postives = 93/164 (56.71%), Query Frame = 0
Query: 4 GHTTCVSIRSKLKVNIITIGKKNSKDAMYDCLASEYAKRMSRVITVH-EKAVKHEAAVKLVH-DLCPRESVMLMDENGDMPRNSKHFSEIVFAALEQGGSRLSIVIGDADGLPPEL---LAIAHPRIRKVSLSSLTFTHKMVRLFVYEQLYRATEIRKNSKYHK 162
G TT ++R +V + GK K D +Y RM + V E A ++ V V DL + +V+ +D GD S+ FS ++++ L+QGGSR+S+VIG A+GLP L R+R VSLS +TF H++ RL +YEQLYRA EIRK + YHK
Sbjct: 30 GCTTRCNVRMVCEVTVRIRGKCTKKGTWQDIGCEQYRVRMRSALDVKTEWAANDDSLVSCVQRDLSKQHAVVCLDVQGD-EHTSESFSGLLYSLLQQGGSRVSVVIGGAEGLPDALRPKTGQLSGRVRYVSLSRMTFPHELARLILYEQLYRAVEIRKGTNYHK 192
BLAST of Gvermi5471.t1 vs. uniprot
Match: A0A7S0NYP8_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0NYP8_9EUKA) HSP 1 Score: 100 bits (248), Expect = 1.660e-23 Identity = 63/147 (42.86%), Postives = 95/147 (64.63%), Query Frame = 0
Query: 16 KVNIITIGKKNSKDAMYDCLASEYAKRMSRVITVHEKAVKHEAAVKLVHDLCPRESVMLMDENGDMPRNSKHFSEIVFAALEQGGSRLSIVIGDADGLPPELLAIAHPRIRKVSLSSLTFTHKMVRLFVYEQLYRATEIRKNSKYHK 162
+V I+++GK +K+A +EY KR+ R +++ V+ +AA+ R + +++DE G + +S+ FSE++F ALE+GG+RLS VIG ADGLP L HP + SLS +T TH+M RL + EQ+YRA EIR+ SKYH+
Sbjct: 47 RVRIVSVGK--TKEAWLQLALAEYMKRV-RTVSLECTWVRDDAALLAE----ARGACIVLDERGKLC-SSREFSEMLFRALEEGGARLSFVIGAADGLPEALRDGPHPLL---SLSRMTLTHQMARLVLAEQIYRACEIRRGSKYHR 182
BLAST of Gvermi5471.t1 vs. uniprot
Match: A0A7J7IM68_9RHOD (Uncharacterized protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IM68_9RHOD) HSP 1 Score: 99.8 bits (247), Expect = 1.920e-23 Identity = 63/153 (41.18%), Postives = 94/153 (61.44%), Query Frame = 0
Query: 11 IRSKLKVNIITIGKKNSKDAMYDCLASEYAKRMSRVITVHEKAVKHEAA-VKLVHDLCPRESVMLMDENGDMPRNSKHFSEIVFAALEQGGSRLSIVIGDADGLPPELLAIAHPRIRKVSLSSLTFTHKMVRLFVYEQLYRATEIRKNSKYHK 162
I+++L ++I+ GK SK + EY KR+S +H+ V+ + V+ E V+ +D + S+ F+ +VF LE+GGSR++ VIG A GLP ++L+ AH +SLSSLTFTH+MVRL + EQ+YRA EIR++S YHK
Sbjct: 28 IQARLHISILAEGK--SKFPWLEEGFREYEKRLSPYAQLHQLWVRDTPSLVRRTRQQRTAERVLALDASRGKSCTSEEFARLVFDELERGGSRITFVIGGATGLPEQVLSEAH---HVLSLSSLTFTHQMVRLILIEQVYRAIEIRRHSPYHK 175
BLAST of Gvermi5471.t1 vs. uniprot
Match: A0A7S0LRI7_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LRI7_9EUKA) HSP 1 Score: 99.8 bits (247), Expect = 2.290e-23 Identity = 62/147 (42.18%), Postives = 95/147 (64.63%), Query Frame = 0
Query: 16 KVNIITIGKKNSKDAMYDCLASEYAKRMSRVITVHEKAVKHEAAVKLVHDLCPRESVMLMDENGDMPRNSKHFSEIVFAALEQGGSRLSIVIGDADGLPPELLAIAHPRIRKVSLSSLTFTHKMVRLFVYEQLYRATEIRKNSKYHK 162
+V I+++GK +K+A +EY KR+ R++ + V+ + A L+ + + +++DE G + +S FSE++FAA+E+GGSRLS +IG ADGLP EL HP + SL +T TH+M RL + EQ+YRA EIR+ SKYH+
Sbjct: 46 RVRIVSVGK--TKEAWLQQALAEYTKRL-RMVQLEYTWVRDDTA--LIAEA--KGPCIVLDERGKLC-SSAEFSELLFAAIEEGGSRLSFIIGAADGLPAELRNGGHPLL---SLGRMTLTHQMARLLLAEQIYRACEIRRGSKYHR 181
BLAST of Gvermi5471.t1 vs. uniprot
Match: A0A7S2UUR8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UUR8_9STRA) HSP 1 Score: 99.4 bits (246), Expect = 4.030e-23 Identity = 65/160 (40.62%), Postives = 91/160 (56.88%), Query Frame = 0
Query: 4 GHTTCVSIRSKLKVNIITIGKKNSKDAMYDCLASEYAKRMSRVITVHEKAVKHEAAVKLVHDLCPRESVML-MDENGDMPRNSKHFSEIVFAALEQGGSRLSIVIGDADGLPPELLAIAHPRIRKVSLSSLTFTHKMVRLFVYEQLYRATEIRKNSKYHK 162
G TC L+V I GKK+ + EY KR+ + + K K ++A L+ + + V++ +DE G + NSK FS++++ LE GGSRL VIG A+GLPP L A +SLS +TFTH+ RL + EQ+YRATEIRK + YHK
Sbjct: 43 GFMTC-----GLEVTIHIRGKKSGGEDWISTGIDEYQKRLRSTLKLQTKWYKDDSA--LIQGVKKEKGVIVTLDERGKL-LNSKEFSQMMYKMLEDGGSRLHFVIGGAEGLPPSLKTEAK---HLISLSKMTFTHQQARLILAEQIYRATEIRKGTGYHK 191
BLAST of Gvermi5471.t1 vs. uniprot
Match: A0A7W1RFH9_9BACT (Ribosomal RNA large subunit methyltransferase H n=1 Tax=Parachlamydiaceae bacterium TaxID=2052176 RepID=A0A7W1RFH9_9BACT) HSP 1 Score: 96.7 bits (239), Expect = 1.210e-22 Identity = 61/147 (41.50%), Postives = 93/147 (63.27%), Query Frame = 0
Query: 16 KVNIITIGKKNSKDAMYDCLASEYAKRMSRVITVHEKAVKHEAAVKLVHDLCPRESVMLMDENGDMPRNSKHFSEIVFAALEQGGSRLSIVIGDADGLPPELLAIAHPRIRKVSLSSLTFTHKMVRLFVYEQLYRATEIRKNSKYHK 162
K+ I++IGK +K++ + EY KR+S++I + K++ + + P +++ +D NG M NS+ FS + E+GGSRL+IVIG A+GLP +L HP + +SLS +TFTH++VRL + EQ+YRA EI K S YHK
Sbjct: 3 KLRILSIGK--TKESWLEEAIDEYLKRLSKIICIEFVWAKNDEQLLALASKEP--TLVCLDANGKM-MNSEAFSTFIVKKFEEGGSRLAIVIGGAEGLPTKLKQ--HPTL--ISLSPMTFTHQLVRLVLVEQIYRAFEIDKGSCYHK 140
BLAST of Gvermi5471.t1 vs. uniprot
Match: A0A1X6PD06_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PD06_PORUM) HSP 1 Score: 98.6 bits (244), Expect = 1.400e-22 Identity = 60/169 (35.50%), Postives = 90/169 (53.25%), Query Frame = 0
Query: 13 SKLKVNIITIGKKNSKDAMYDCLASEYAKRMSRVITVHEKAVKHEAAVKLV------------HDLCPRESVMLMDENGDMPRNSKHFSEIVFAALEQGGSRLSIVIGDADGLPPELLAIAHPR-------IRKVSLSSLTFTHKMVRLFVYEQLYRATEIRKNSKYHK 162
+K +V ++T+G++++KDA+YD Y R + + + V A + PR V+ +DE G P +S F+ +++ LE+GGSRL VIG+ADGL P + +SLS LT HK+VRL + EQLYRA+EIR+ SKY+K
Sbjct: 47 AKARVEVVTLGRRSTKDAVYDSAVDMYITRAGPRLDIACRWVAPATAAAALLPSGSDRAGGGKATAGPRAHVICLDEGGSAPASSDAFATLLYDRLERGGSRLVFVIGEADGLSPAFREAVRAAGRGPAGGVEALSLSPLTLPHKLVRLVLVEQLYRASEIRRGSKYNK 215
BLAST of Gvermi5471.t1 vs. uniprot
Match: A0A6H5KEB2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEB2_9PHAE) HSP 1 Score: 96.7 bits (239), Expect = 6.940e-22 Identity = 63/152 (41.45%), Postives = 90/152 (59.21%), Query Frame = 0
Query: 15 LKVNIITIGKKNSKDAMYDCLASEYAKRMSRVITV----HEKAVKHEAAVKLVHDLCPRESVMLMDENGDMPRNSKHFSEIVFAALEQGGSRLSIVIGDADGLPPELLAIAHPRIRKVSLSSLTFTHKMVRLFVYEQLYRATEIRKNSKYHK 162
L++ + GKK+ ++ + EYAKR+ V+ + H+ EAAV+ + V+ +DE G NS FS+ VF+ LE+GGSRL+ V+G A+GLPP L K+SLSS+TFTH R + EQ+YRA+EIR+ SKYHK
Sbjct: 64 LQITVRIRGKKSREEDYTNQAYDEYAKRLRPVLALDTQWHKTDDDLEAAVRKDPGV-----VVCLDEGGRQ-MNSPAFSDFVFSKLEEGGSRLTFVVGGAEGLPPGLKQKPPHGGAKLSLSSMTFTHLWARALLAEQIYRASEIRRGSKYHK 209
BLAST of Gvermi5471.t1 vs. uniprot
Match: A0A5J4YMA3_PORPP (Ribosomal RNA large subunit methyltransferase H n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YMA3_PORPP) HSP 1 Score: 100 bits (248), Expect = 1.380e-21 Identity = 64/162 (39.51%), Postives = 96/162 (59.26%), Query Frame = 0
Query: 11 IRSKLKVNIITIGKKNSKDAMYDCLASEYAKRM--SRVITVHEKAVK-HEAAVKLVHDLCPRESVMLMDENGDMPRNSKHFSEIVFAALEQGGSRLSIVIGDADGLPPELLA-IAHPRIRK------VSLSSLTFTHKMVRLFVYEQLYRATEIRKNSKYHK 162
+R + V+++T+GKK++K+A + +E+A RM S + + +K +E V + R V+ +DE GD P +S F+E+ + E G S ++ VIG ADGLP + A PR ++ +SLS LTFTHKM R + EQ+YRATEIRK S Y+K
Sbjct: 348 VRCLVHVSVLTVGKKSAKEAWAEVPVAEHATRMRGSNAVDLKADYIKDNETLVARLDGDKQRGYVVALDECGDAPGSSAQFAELFYKWAELGNSHITFVIGGADGLPYVIKQDAAAPRTKRKYVQHFLSLSELTFTHKMARALICEQIYRATEIRKGSGYNK 509 The following BLAST results are available for this feature:
BLAST of Gvermi5471.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gvermi5471.t1 ID=Gvermi5471.t1|Name=Gvermi5471.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=163bpback to top |