Gvermi5469.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi5469.t1
Unique NameGvermi5469.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length360
Homology
BLAST of Gvermi5469.t1 vs. uniprot
Match: A0A2V3IZ03_9FLOR (Thylakoid membrane protein TERC, chloroplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZ03_9FLOR)

HSP 1 Score: 426 bits (1094), Expect = 1.890e-146
Identity = 233/326 (71.47%), Postives = 272/326 (83.44%), Query Frame = 0
Query:   36 SRLPSLDNGAQTVSRAALTTSRSDPLQVKS-KTKSVS-ALSLLPLPTPHVLQTILWVLLAATVAATVAFVQGWQRAFEFTTAYIVEYSLSVDNLFVFLLIFRYFKVPREAQQTVLRYGILGAMILRGIMIVAGKVLIDKFQWLAMAFAALLMYSAVKLLLEDDDDSDLDDNRIIAYSRNILPVAEFYAGDKFLVHDGTRLMATPLMVVLIAIELSDVVFALDSVPAVLGISNDTFVVYTSNILAIMGLRSLFFVLSNTIGTLRFLKQSLSAVLAFIGFKMIAGCLGYDLGVAVSLSVVTVTLAVGIVMSLVFPERRDPPLSPSNSV 359
            SRLP  DNGA  + R ++T SRSDP  +K  KTKS S +   LP  TPH+  T+LW+L AA+    +A  +  + A EF T YIVEYSLSVDNLFVFLLIFRYFKVP +AQQTVLRYGILGAM+LRGIMI+AGK LID+F+WLA+ FAALL+YSA KLL EDDDDSDL++NR+IA SRN+ PVA++Y GDKF +HDGTR +ATPLMVVLIAIELSDV+FALDSVPAVLGIS DT V+YTSNILAIMGLRSLFFVLSNTI +LRFLKQSL+ VLAFIG KMIA C G++LG+A SLSVVT TLA+GIV+SL+FP++ DP LSPSNSV
Sbjct:    4 SRLPPADNGASALPRPSVTISRSDPTHIKLLKTKSSSGSYWFLPPLTPHLRNTLLWLLFAASFVPLLALGRSPRHALEFATGYIVEYSLSVDNLFVFLLIFRYFKVPTDAQQTVLRYGILGAMLLRGIMILAGKALIDRFEWLAILFAALLIYSAGKLLFEDDDDSDLENNRVIALSRNLFPVADYYTGDKFFIHDGTRFVATPLMVVLIAIELSDVIFALDSVPAVLGISTDTLVIYTSNILAIMGLRSLFFVLSNTIASLRFLKQSLAIVLAFIGIKMIAACFGHELGIAWSLSVVTFTLALGIVLSLLFPDQPDPALSPSNSV 329          
BLAST of Gvermi5469.t1 vs. uniprot
Match: A0A1X6PEJ8_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PEJ8_PORUM)

HSP 1 Score: 270 bits (689), Expect = 1.620e-83
Identity = 147/274 (53.65%), Postives = 199/274 (72.63%), Query Frame = 0
Query:   83 VLQTILWVLLAATVAATVAFVQGWQRAFEFTTAYIVEYSLSVDNLFVFLLIFRYFKVPREAQQTVLRYGILGAMILRGIMIVAGKVLIDKFQWLAMAFAALLMYSAVKLLLED--DDDSDLDDNRIIAYSRNILPVAEFYAGDKFLVH-------DGTRLMATPLMVVLIAIELSDVVFALDSVPAVLGISNDTFVVYTSNILAIMGLRSLFFVLSNTIGTLRFLKQSLSAVLAFIGFKMIAGCLGYDLGVAVSLSVVTVTLAVGIVMSLVFPE 347
            +L T+ WV  A  VAA VA   G +R  EF  AY+VEYSLSVDNL VFLL+F++F VPR  Q  VL++GI+GAM LRG+MIVAG+ L  +F+W+++ F  +L+ SA K+L+     DD D+ +N  + ++R +LP ++ Y GD+F          DG RL ATPLM+VL+++E SDVVFALDSVPAVLGIS+ TFV+Y SNI+A++GLRSLFFV+S  IG LRFL+ +L+ VLAF+G KM+AG  GY++G+  SL V+TV +  G+  SL+FPE
Sbjct:  169 ILYTLCWVAAAGVVAAGVAATLGAERGLEFVAAYVVEYSLSVDNLLVFLLLFQHFHVPRRLQARVLKWGIIGAMSLRGVMIVAGEALTRRFRWVSLVFGGILLVSAAKMLIPGAGGDDEDVANNATVRFARRLLPFSDAYDGDRFFTSGAGGPGGDGPRL-ATPLMLVLLSVEFSDVVFALDSVPAVLGISSHTFVIYASNIMAVLGLRSLFFVISEAIGDLRFLQPALAVVLAFVGLKMMAGVAGYEVGILPSLGVITVCVGGGVAASLLFPE 441          
BLAST of Gvermi5469.t1 vs. uniprot
Match: A0A7S3ABX2_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3ABX2_9RHOD)

HSP 1 Score: 256 bits (655), Expect = 1.590e-80
Identity = 141/268 (52.61%), Postives = 194/268 (72.39%), Query Frame = 0
Query:   84 LQTILWVLLAATVAATVAFVQGW-QRAFEFTTAYIVEYSLSVDNLFVFLLIFRYFKVPREAQQTVLRYGILGAMILRGIMIVAGKVLIDKFQWLAMAFAALLMYSAVKLLLEDDDDSDLDDNRIIAYSRNILPVAEFYAGDKFLVHDGTRLMATPLMVVLIAIELSDVVFALDSVPAVLGISNDTFVVYTSNILAIMGLRSLFFVLSNTIGTLRFLKQSLSAVLAFIGFKMIAGCLGYDLGVAVSLSVVTVTLAVGIVMSLVFPERRD 350
            L+ +  V L  + A  V  V G   R  E+ T Y+VE SLSVDNLFVFLLIF YF VPREAQ+ VL +GILGAMI RG+MI  G  L ++F+   + FAA+L+YSA+KLL+E +++ DL DNRII +++ ++PV+E Y G KF   +  +++ TPL+VVL++IELSDVVFA DSVPAVLGIS+D FV+YTSN+ AI+GLRSL+FV+++ IGTLRFL+ SL+ VL FI  KMI   +G  +   +SL  V + L+ G+ +S ++P  ++
Sbjct:   15 LKVVATVCLGLSFAGGVYLVDGKADRCIEYLTGYVVELSLSVDNLFVFLLIFNYFHVPREAQEPVLFWGILGAMIFRGLMIFIGGKLTERFRLAQLGFAAILLYSAIKLLIEGEENEDLSDNRIIKFAKRVVPVSETYHGTKFYFKESEKIVWTPLLVVLLSIELSDVVFAFDSVPAVLGISDDIFVIYTSNVFAIIGLRSLYFVIADAIGTLRFLQPSLALVLGFIALKMIFAVVGLQVNTKLSLGFVLLILSGGVGLSYLYPGAKE 282          
BLAST of Gvermi5469.t1 vs. uniprot
Match: A0A7S0T6N1_9RHOD (Hypothetical protein n=1 Tax=Erythrolobus madagascarensis TaxID=708628 RepID=A0A7S0T6N1_9RHOD)

HSP 1 Score: 256 bits (654), Expect = 6.070e-79
Identity = 138/268 (51.49%), Postives = 193/268 (72.01%), Query Frame = 0
Query:   89 WVLLAATVAATVAFVQGWQRAFEFTTAYIVEYSLSVDNLFVFLLIFRYFKVPREAQQTVLRYGILGAMILRGIMIVAGKVLIDKFQWLAMAFAALLMYSAVKLLL--EDDDDSDLDDNRIIAYSRNILPVAEFYAGDKFLVHDG---TRLMATPLMVVLIAIELSDVVFALDSVPAVLGISNDTFVVYTSNILAIMGLRSLFFVLSNTIGTLRFLKQSLSAVLAFIGFKMIAGCLGYDLGVAVSLSVVTVTLAVGIVMSLVFPERRDP 351
            WV +AA V A V    G  RA+EF TAY+VEYSLSVDNLFVFLL+F+YFKVPR+AQ+ VL++G++GA ++R   I  G+ L  +F W+++ FA +L+ SAVK+ +  +++D+ DL  N I+ +S+++L  ++ Y GD+F   DG    + +ATPL++ LI +ELSDVVFALDSVPAVLGIS + FVVY+SN+LAI+GLRSLFFV+ + +  LRFL+ SL AVLAF+G K+     GY++   +SL+VV   L+ GI +S   P   DP
Sbjct:  131 WVAVAAAVGAGVYAKMGADRAYEFVTAYVVEYSLSVDNLFVFLLLFQYFKVPRDAQEKVLQWGVIGAGLMRLAFIFVGEELESRFWWVSLIFAVILIASAVKIFVAGDEEDEEDLSQNSIVNFSKSLLSFSDSYDGDRFWTRDGPEAAKAVATPLLLTLICVELSDVVFALDSVPAVLGISKNLFVVYSSNLLAILGLRSLFFVVEDAVANLRFLQPSLGAVLAFVGLKLAGSSFGYNIDTGLSLAVVASILSAGIGLSYALPNDSDP 398          
BLAST of Gvermi5469.t1 vs. uniprot
Match: A0A7S0ZLL3_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZLL3_9RHOD)

HSP 1 Score: 253 bits (647), Expect = 3.690e-78
Identity = 138/265 (52.08%), Postives = 191/265 (72.08%), Query Frame = 0
Query:   84 LQTILWVLLAATVAATVAFVQGWQRAFEFTTAYIVEYSLSVDNLFVFLLIFRYFKVPREAQQTVLRYGILGAMILRGIMIVAGKVLIDKFQWLAMAFAALLMYSAVKLLLEDDDDSD--LDDNRIIAYSRNILPVAEFYAGDKFLVHDGTRLMATPLMVVLIAIELSDVVFALDSVPAVLGISNDTFVVYTSNILAIMGLRSLFFVLSNTIGTLRFLKQSLSAVLAFIGFKMIAGCLGYDLGVAVSLSVVTVTLAVGIVMSLVFP 346
            L+   WV++  +  A V  ++G   A E+ T Y+VE SLSVDNLFVFLLIF +F+VPR+ Q+T L +GI+GA   RG+M+V G+ L+ +F+ + + FA +L+YSA K+++E DDD +  L+ N+II + R ++PV + Y G KF V +   L+ TPL VVL  IELSDVVFA+DSVPAVLGIS+ TFVVY+SNI AI+GLRS+FFV+S+ I  LRFLK SLS +LAF+G K++A    Y+L    SL+VV + L +G+  SL+FP
Sbjct:   92 LRASFWVVIGISFGAVVWLMEGLDAALEYWTCYVVEQSLSVDNLFVFLLIFSFFRVPRDLQETALYWGIVGACFFRGLMVVIGEALVHRFKKVNLFFAGVLLYSAYKIMMEGDDDGNDSLEKNKIIQFVRKLVPVTDRYHGKKFFVKENGILLGTPLFVVLACIELSDVVFAMDSVPAVLGISSRTFVVYSSNIAAILGLRSMFFVISDAIAHLRFLKHSLSIMLAFVGLKIVATHFEYELNTLTSLAVVILVLGIGVCASLLFP 356          
BLAST of Gvermi5469.t1 vs. uniprot
Match: A0A5J4YSR0_PORPP (Thylakoid membrane protein TERC, chloroplastic n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YSR0_PORPP)

HSP 1 Score: 244 bits (623), Expect = 4.070e-74
Identity = 125/269 (46.47%), Postives = 190/269 (70.63%), Query Frame = 0
Query:   85 QTILWVLLAATVAATVAFVQGWQRAFEFTTAYIVEYSLSVDNLFVFLLIFRYFKVPREAQQTVLRYGILGAMILRGIMIVAGKVLIDKFQWLAMAFAALLMYSAVKLLL----EDDDDSDLDDNRIIAYSRNILPVAEFYAGDKFLVHDGTRLMATPLMVVLIAIELSDVVFALDSVPAVLGISNDTFVVYTSNILAIMGLRSLFFVLSNTIGTLRFLKQSLSAVLAFIGFKMIAGCLGYDLGVAVSLSVVTVTLAVGIVMSLVFPERR 349
            +T  WV     +   V  ++    A ++ T YI+E SLSVDNLFVFLLIFR+FKVPR++Q+ VL +GI+GA + RG+MIV G+ L+ +F W+++ F+ +L+YSA  LL     +DDD   + +N ++ + R ++PVA+ Y G KF V++  RL+ TPL++VL+ IELSDV+FA+DSVPAVLG+S+ T VVYTSN+ AI+GLRSL+FV+++ I  +RFLK SLS +L+F+G K++    G+ +   +SL  + + LA G+  S++ P ++
Sbjct:  119 RTAFWVGFGLLLGLGVWLIEDHDSALQYWTCYIIEQSLSVDNLFVFLLIFRFFKVPRDSQEVVLYWGIVGACVFRGLMIVLGEALVHRFTWISLIFSVILLYSAFMLLFGADSDDDDPDSMANNSVVTFVRRVVPVADRYHGRKFFVYENGRLVGTPLLLVLLCIELSDVIFAMDSVPAVLGLSDKTLVVYTSNMAAILGLRSLYFVIADAIQNMRFLKHSLSIMLSFVGIKIVLDFFGFHISTLLSLLFILLVLACGVTASMLLPLKQ 387          
BLAST of Gvermi5469.t1 vs. uniprot
Match: A0A5J4YHZ0_PORPP (Thylakoid membrane protein TERC, chloroplastic n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YHZ0_PORPP)

HSP 1 Score: 239 bits (611), Expect = 1.220e-72
Identity = 135/269 (50.19%), Postives = 182/269 (67.66%), Query Frame = 0
Query:   89 WVLLAATVAATVAFVQGWQRAFEFTTAYIVEYSLSVDNLFVFLLIFRYFKVPREAQQTVLRYGILGAMILRGIMIVAGKVLIDKFQWLAMAFAALLMYSAVKLLLE--DDDDSDLDDNRIIAYSRNILPVAEFYAGDKFLVH---------DGTRLMATPLMVVLIAIELSDVVFALDSVPAVLGISNDTFVVYTSNILAIMGLRSLFFVLSNTIGTLRFLKQSLSAVLAFIGFKMIAGCLGYDLGVAVSLSVVTVTLAVGIVMSLVFP 346
            WV LA+ V   V F  G+ R  E+ TAYIVEYSLSVDNLFVFLL+FR+FKV R AQ+ VL +GI GA  +RGI I+AG+ L  +F W+++ FAA L++SA K+L+   +D++ DL DN I++++R +L  ++ Y GDKF               + + TPL++ LI+IE+SDVVFALDSVPAVLGIS+   V+Y SN++AI+GLRSLFFV+ + +  LR+L+  L  VL FIG K+ A   GYD+    SL +V  TL  GIV S   P
Sbjct:  114 WVALASAVGVGVYFQYGYDRVVEYVTAYIVEYSLSVDNLFVFLLLFRFFKVERAAQEKVLSWGIFGAAAMRGIFILAGEELEHRFTWVSLLFAAFLLFSAAKILVAGGEDEEDDLSDNSIVSFARKLLNFSDHYDGDKFWTTVPVEGRTGAGALQRVGTPLLLCLISIEISDVVFALDSVPAVLGISDSALVIYMSNLMAILGLRSLFFVVEDAVANLRYLQPCLGVVLGFIGAKLAASTFGYDIDTLQSLGIVLGTLTTGIVASYANP 382          
BLAST of Gvermi5469.t1 vs. uniprot
Match: A0A2V3IQ79_9FLOR (Thylakoid membrane protein TERC, chloroplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQ79_9FLOR)

HSP 1 Score: 234 bits (597), Expect = 4.640e-71
Identity = 124/237 (52.32%), Postives = 181/237 (76.37%), Query Frame = 0
Query:  111 EFTTAYIVEYSLSVDNLFVFLLIFRYFKVPREAQQTVLRYGILGAMILRGIMIVAGKVLIDKFQWLAMAFAALLMYSAVKLLLEDDDDS-DLDDNRIIAYSRNILPVAEFYAGDKFLVHDGTRLMATPLMVVLIAIELSDVVFALDSVPAVLGISNDTFVVYTSNILAIMGLRSLFFVLSNTIGTLRFLKQSLSAVLAFIGFKMIAGCLGYDLGVAVSLSVVTVTLAVGIVMSLVFP 346
            EF TAYI+EY+LSVDNL VFLLIF YF VPR  Q  VL +G+ GA+I+RG+ I+ G+ L  +F+  ++ FAA+L++SA KL L D++D  DL +N I+ ++ ++LPV++ Y+GD+F V +    +ATPL++VL+ +E+SD+VFALDSVPAVLG+S+ T V+Y SN+LA++GLRSL+F+L+++I  LRFL+ +L+ VLAFIG KM A    +++ V +SLSVV  TL   ++ SL+FP
Sbjct:  102 EFLTAYIIEYALSVDNLLVFLLIFDYFAVPRAFQSRVLSFGLTGAVIMRGVFIIFGEALTHRFKPASLIFAAILLFSAAKLALSDEEDEEDLSNNAIVKFANSVLPVSDAYSGDRFFVRNNGIKVATPLLLVLLVVEISDLVFALDSVPAVLGVSDRTSVIYVSNVLAVLGLRSLYFLLADSIANLRFLQPALAFVLAFIGAKMGASVFQFEVPVTLSLSVVVSTLGSAVLASLLFP 338          
BLAST of Gvermi5469.t1 vs. uniprot
Match: A0A6N6PIW2_9BACT (TerC family protein n=1 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=A0A6N6PIW2_9BACT)

HSP 1 Score: 232 bits (591), Expect = 1.700e-70
Identity = 122/265 (46.04%), Postives = 174/265 (65.66%), Query Frame = 0
Query:   86 TILWVLLAATVAATVAFVQGWQRAFEFTTAYIVEYSLSVDNLFVFLLIFRYFKVPREAQQTVLRYGILGAMILRGIMIVAGKVLIDKFQWLAMAFAALLMYSAVKLLLEDDDDSDLDDNRIIAYSRNILPVAEFYAGDKFLVHDGTRLMATPLMVVLIAIELSDVVFALDSVPAVLGISNDTFVVYTSNILAIMGLRSLFFVLSNTIGTLRFLKQSLSAVLAFIGFKMIAGCLGYDLGVAVSLSVVTVTLAVGIVMSLVFPERRD 350
            T+ WV LA      + +  G Q A EFTT Y++EYSLSVDN+FVF ++F YF VP   Q  VL +GILGA+ILR  MIVAG VLI KF+W+   F A L+ + +K++++ +++   + N ++ + + ++PV   Y GDKF V +    MATPL VVL+ IE+SDV+FA+DS+PA+  ++ D F+VYTSNI AI+GLRSL+F L+  +     LK  L  VL F+G KM+ G   Y +   VSL V+   LA  IV+SL+ P++ +
Sbjct:   42 TVAWVSLAMLFNIGLWYFAGAQTALEFTTGYVIEYSLSVDNIFVFAMLFSYFAVPPSYQHRVLFWGILGALILRAAMIVAGTVLITKFEWIIYVFGAFLIVTGIKMIVKQEEELHPERNPVVRWFKKLMPVTSDYRGDKFFVRENGIRMATPLFVVLLLIEVSDVIFAVDSIPAIFAVTKDPFIVYTSNIFAILGLRSLYFALAGVLDKFHLLKIGLGVVLTFVGVKMLLGHTAYKIDTLVSLGVIVGVLATSIVLSLLRPKKAE 306          
BLAST of Gvermi5469.t1 vs. uniprot
Match: A0A7S0ZCP1_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZCP1_9RHOD)

HSP 1 Score: 228 bits (581), Expect = 4.070e-70
Identity = 121/237 (51.05%), Postives = 175/237 (73.84%), Query Frame = 0
Query:  119 EYSLSVDNLFVFLLIFRYFKVPREAQQTVLRYGILGAMILRGIMIVAGKVLIDKFQWLAMAFAALLMYSAVKLLL---EDDDDSDLDDNRIIAYSRNILPVAEFYAGDKFL--VHDGTRLMATPLMVVLIAIELSDVVFALDSVPAVLGISNDTFVVYTSNILAIMGLRSLFFVLSNTIGTLRFLKQSLSAVLAFIGFKMIAGCLGYDLGVAVSLSVVTVTLAVGIVMSLVFPERRD 350
            EYSLSVDNLFVFLL+F+YFKVPR++Q+ VL YGI+GA  +R   IV G+ L  +F+W+++ F+ +L+ SAV++ +   +DD+D DL  N I+ +S+++L  +E Y GDKF   + +G + +ATPL++ LI +ELSDVVFALDSVPAVLGIS++TFV+Y+SN++AI+GLRSLFFV+ + +  LRFL+  L AVLAF+G K+     GY +   VSL ++   L+ G+ +S  FPE + 
Sbjct:    1 EYSLSVDNLFVFLLLFQYFKVPRKSQEKVLNYGIIGAASMRLAFIVVGEALEKRFEWVSLIFSFILIVSAVQIFVSGGDDDEDEDLSGNSIVQFSKSLLSFSEKYDGDKFWSELENGAK-VATPLLLTLICVELSDVVFALDSVPAVLGISDNTFVIYSSNLMAILGLRSLFFVVEDAVANLRFLQPCLGAVLAFVGVKLGVSVFGYTIDTTVSLGIILALLSTGVGLSYAFPENKS 236          
The following BLAST results are available for this feature:
BLAST of Gvermi5469.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IZ03_9FLOR1.890e-14671.47Thylakoid membrane protein TERC, chloroplastic n=1... [more]
A0A1X6PEJ8_PORUM1.620e-8353.65Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A7S3ABX2_9RHOD1.590e-8052.61Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A7S0T6N1_9RHOD6.070e-7951.49Hypothetical protein n=1 Tax=Erythrolobus madagasc... [more]
A0A7S0ZLL3_9RHOD3.690e-7852.08Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A5J4YSR0_PORPP4.070e-7446.47Thylakoid membrane protein TERC, chloroplastic n=1... [more]
A0A5J4YHZ0_PORPP1.220e-7250.19Thylakoid membrane protein TERC, chloroplastic n=1... [more]
A0A2V3IQ79_9FLOR4.640e-7152.32Thylakoid membrane protein TERC, chloroplastic n=1... [more]
A0A6N6PIW2_9BACT1.700e-7046.04TerC family protein n=1 Tax=Verrucomicrobia bacter... [more]
A0A7S0ZCP1_9RHOD4.070e-7051.05Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022369Integral membrane protein TerC, riboswitch-linkedTIGRFAMTIGR03718TIGR03718coord: 84..347
e-value: 7.8E-94
score: 312.5
IPR022369Integral membrane protein TerC, riboswitch-linkedPANTHERPTHR30238:SF0THYLAKOID MEMBRANE PROTEIN TERC, CHLOROPLASTICcoord: 83..348
IPR005496Integral membrane protein TerCPFAMPF03741TerCcoord: 114..315
e-value: 2.8E-46
score: 157.5
NoneNo IPR availablePANTHERPTHR30238MEMBRANE BOUND PREDICTED REDOX MODULATORcoord: 83..348
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 149..170
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 326..345
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 83..103
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 194..267
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 268..289
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 138..148
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 104..114
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 321..325
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 346..359
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..82
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 115..137
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 301..320
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 175..193
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 290..300
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 171..174
NoneNo IPR availableTMHMMTMhelixcoord: 112..134
NoneNo IPR availableTMHMMTMhelixcoord: 233..252
NoneNo IPR availableTMHMMTMhelixcoord: 88..107
NoneNo IPR availableTMHMMTMhelixcoord: 147..166
NoneNo IPR availableTMHMMTMhelixcoord: 302..319
NoneNo IPR availableTMHMMTMhelixcoord: 267..289
NoneNo IPR availableTMHMMTMhelixcoord: 176..193
NoneNo IPR availableTMHMMTMhelixcoord: 323..345

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24228contigScGOVlb_24228:2165385..2166464 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi5469.t1Gvermi5469.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24228 2165385..2166464 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi5469.t1 ID=Gvermi5469.t1|Name=Gvermi5469.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=360bp
MAARTRAPDVTVPVGQPTAASVPVIPRSISHGRMLSRLPSLDNGAQTVSR
AALTTSRSDPLQVKSKTKSVSALSLLPLPTPHVLQTILWVLLAATVAATV
AFVQGWQRAFEFTTAYIVEYSLSVDNLFVFLLIFRYFKVPREAQQTVLRY
GILGAMILRGIMIVAGKVLIDKFQWLAMAFAALLMYSAVKLLLEDDDDSD
LDDNRIIAYSRNILPVAEFYAGDKFLVHDGTRLMATPLMVVLIAIELSDV
VFALDSVPAVLGISNDTFVVYTSNILAIMGLRSLFFVLSNTIGTLRFLKQ
SLSAVLAFIGFKMIAGCLGYDLGVAVSLSVVTVTLAVGIVMSLVFPERRD
PPLSPSNSV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022369Integral_membrane_TerC_rswitch
IPR005496Integral_membrane_TerC