Gvermi5460.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male
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Overview
Homology
BLAST of Gvermi5460.t1 vs. uniprot
Match: R7Q2U6_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q2U6_CHOCR) HSP 1 Score: 115 bits (288), Expect = 1.350e-26 Identity = 54/117 (46.15%), Postives = 79/117 (67.52%), Query Frame = 0
Query: 1 MLGMKQLYTTANHPQTNDQSVRFNKTIASRLKHYVADHQKDEDGYVGPLTYTYKLQIHRSTGTAPFNLMLSRNPPSSVLAVRATAHPVDGPQAPKATQAHRSILGRDTEGIELIGPK 117
+LG++ + TTA HPQTN Q+ RFN+T+A+RL+HYV++HQ+D D YV PLTY Y +Q+H+STGT PF+L+L+R+PP + ++A P P + Q R L R + + G K
Sbjct: 120 LLGIRHVLTTAYHPQTNGQAERFNRTLATRLRHYVSEHQRDWDDYVQPLTYAYNMQVHKSTGTTPFDLVLTRHPPGISVQAPSSAIPSPNGSEPTSAQMKRITLQRVRKILSRAGTK 236
BLAST of Gvermi5460.t1 vs. uniprot
Match: R7QR94_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QR94_CHOCR) HSP 1 Score: 109 bits (273), Expect = 5.140e-24 Identity = 49/98 (50.00%), Postives = 73/98 (74.49%), Query Frame = 0
Query: 2 LGMKQLYTTANHPQTNDQSVRFNKTIASRLKHYVADHQKDEDGYVGPLTYTYKLQIHRSTGTAPFNLMLSRNPPSSVLAVRATAHPVDGPQAPKATQA 99
LG++ + TTA HPQTN Q+ RFN+T+A+RL+HYV++HQ+D D YV PLTY Y +Q+H+ST T PF+L+L+R+PP ++V+A + + P + T A
Sbjct: 505 LGIRHVLTTAYHPQTNGQAERFNRTLATRLRHYVSEHQRDWDDYVQPLTYAYNMQVHKSTSTTPFDLILTRHPPG--ISVQAPSSAIPSPNGSEPTSA 600
BLAST of Gvermi5460.t1 vs. uniprot
Match: R7Q4X3_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q4X3_CHOCR) HSP 1 Score: 100 bits (248), Expect = 6.690e-21 Identity = 78/252 (30.95%), Postives = 114/252 (45.24%), Query Frame = 0
Query: 1 MLGMKQLYTTANHPQTNDQSVRFNKTIASRLKHYVADHQKDEDGYVGPLTYTYKLQIHRSTGTAPFNLMLSRNPPSSVLAVRATAHPVDGPQAPKATQAHRSILGRDTEGIELIGPKDVVSRER-----ETKV---PKPIASKILATPPPG------SRAELCNPATSRITIPLNTRNLITPLG-------EPLLEAPDG----------------IMTPEGDILYAVDHTVSHRQTPAGILYRVCWIGYTS 215
+LG++ TTA HPQ+N Q+ RFN+T+ RL+HYV +HQ+D D Y+ PLT+ Y Q+HRST T PF+L+L+R PPS ++ PV Q R+ L + + ++ K S++R + KV P +A + P R R+ +T LI G + + + P G TP + Y VD V HR T G Y+V W GY +
Sbjct: 202 LLGVRHYLTTAYHPQSNGQTERFNRTLVQRLRHYVEEHQRDWDDYLQPLTFAYNTQVHRSTETTPFDLVLTR-PPSGLILPEDPRTPV---------QYKRATLRKLRDALDRARTKLSASQKRYKDDFDKKVRFRPVVVAGDFVYVDRPPRPLTSVERRTRAQEGPFRVRSATDTTVLIEQDGVENRVSIDRVTKMPRGPGDTVASAIPSASDAQTTTPRAE--YVVDRIVGHRMTRGGTEYKVRWYGYAA 441
BLAST of Gvermi5460.t1 vs. uniprot
Match: R7QJ93_CHOCR (Integrase catalytic domain-containing protein n=3 Tax=Chondrus crispus TaxID=2769 RepID=R7QJ93_CHOCR) HSP 1 Score: 100 bits (249), Expect = 7.540e-21 Identity = 51/125 (40.80%), Postives = 74/125 (59.20%), Query Frame = 0
Query: 1 MLGMKQLYTTANHPQTNDQSVRFNKTIASRLKHYVADHQKDEDGYVGPLTYTYKLQIHRSTGTAPFNLMLSRNPPSSVLAVRATAHPVDGPQAPKA-TQAHRSILGRDTEGIELIGPKDVVSRER 124
+LG++ TTA HPQTN Q+ RFN+T+ RL+HYVA+HQ+D D Y+ PLT+ Y Q+HRST T PF+L+L+R P L V + P+ Q R+ L + + +E K ++ R
Sbjct: 410 LLGVRHYLTTAYHPQTNGQTERFNRTLVQRLRHYVAEHQRDWDEYIQPLTFAYNTQVHRSTETTPFDLVLTRPPSGLALPGTVPQDAVSNTEDPRTPVQYKRATLRKLRDALERTRVKLTAAQRR 534
BLAST of Gvermi5460.t1 vs. uniprot
Match: R7Q7I0_CHOCR (Integrase catalytic domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q7I0_CHOCR) HSP 1 Score: 99.8 bits (247), Expect = 8.010e-21 Identity = 46/99 (46.46%), Postives = 67/99 (67.68%), Query Frame = 0
Query: 1 MLGMKQLYTTANHPQTNDQSVRFNKTIASRLKHYVADHQKDEDGYVGPLTYTYKLQIHRSTGTAPFNLMLSRNPPSSVLAV--RATAHPVDGPQAPKAT 97
+LG++ TTA HPQ+N Q+ RFN+T+ RL+HYV +HQ+D D YV PLT+ Y Q+HRST T PF+L+L+ P +L V R T P++ + P+ +
Sbjct: 332 LLGVRHYLTTAYHPQSNGQTERFNRTLVQRLRHYVEEHQRDWDDYVQPLTFAYNTQVHRSTETTPFDLVLTHPPSGLILPVLRRRTRGPIERTRGPRCS 430
BLAST of Gvermi5460.t1 vs. uniprot
Match: R7QU67_CHOCR (Integrase catalytic domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QU67_CHOCR) HSP 1 Score: 97.8 bits (242), Expect = 2.040e-20 Identity = 47/85 (55.29%), Postives = 60/85 (70.59%), Query Frame = 0
Query: 1 MLGMKQLYTTANHPQTNDQSVRFNKTIASRLKHYVADHQKDEDGYVGPLTYTYKLQIHRSTGTAPFNLMLSRNPPSSVLAVRATA 85
+LG+ TTA HPQTN Q+ RFNKTI RL+HYV +HQ+D D ++ PL Y Y +Q+HRST T PF+L+L+R P S L V TA
Sbjct: 92 LLGIHHYLTTAYHPQTNGQTERFNKTIVQRLRHYVEEHQRDWDEFLQPLAYAYNIQVHRSTETTPFDLVLTRQP--SGLTVAGTA 174
BLAST of Gvermi5460.t1 vs. uniprot
Match: R7QLW9_CHOCR (Integrase catalytic domain-containing protein n=2 Tax=Chondrus crispus TaxID=2769 RepID=R7QLW9_CHOCR) HSP 1 Score: 98.6 bits (244), Expect = 3.300e-20 Identity = 43/74 (58.11%), Postives = 54/74 (72.97%), Query Frame = 0
Query: 1 MLGMKQLYTTANHPQTNDQSVRFNKTIASRLKHYVADHQKDEDGYVGPLTYTYKLQIHRSTGTAPFNLMLSRNP 74
++G++ L+TTA HPQTN Q RFN+TI S ++HYV +HQK D Y GPLTY Y Q+HRSTG PF L+ SR P
Sbjct: 436 IMGIRNLFTTAYHPQTNGQVERFNQTILSGIRHYVVEHQKTRDEYCGPLTYAYNTQVHRSTGCTPFELVFSRPP 509
BLAST of Gvermi5460.t1 vs. uniprot
Match: R7QLF2_CHOCR (Integrase catalytic domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QLF2_CHOCR) HSP 1 Score: 97.8 bits (242), Expect = 7.020e-20 Identity = 43/79 (54.43%), Postives = 58/79 (73.42%), Query Frame = 0
Query: 1 MLGMKQLYTTANHPQTNDQSVRFNKTIASRLKHYVADHQKDEDGYVGPLTYTYKLQIHRSTGTAPFNLMLSRNPPSSVL 79
+LG++ TTA HPQTN Q+ RFN+T+ RL+HYV +HQ+D D YV PLT+ Y Q+HRST T PF+L+L+R P +L
Sbjct: 586 LLGVRPYLTTAYHPQTNGQTERFNRTLVQRLRHYVEEHQRDWDDYVQPLTFAYNTQVHRSTETTPFDLVLTRPPTGLIL 664
BLAST of Gvermi5460.t1 vs. uniprot
Match: R7QN04_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QN04_CHOCR) HSP 1 Score: 96.7 bits (239), Expect = 1.720e-19 Identity = 43/79 (54.43%), Postives = 60/79 (75.95%), Query Frame = 0
Query: 1 MLGMKQLYTTANHPQTNDQSVRFNKTIASRLKHYVADHQKDEDGYVGPLTYTYKLQIHRSTGTAPFNLMLSRNPPSSVL 79
+LG++ TTA HPQ+N Q+ RFN+T+ RL+HYV +HQ+D D YV PLT+ Y Q+HRST T PF+L+L+R PPS ++
Sbjct: 490 LLGVRHYLTTAYHPQSNGQTERFNRTLVQRLRHYVEEHQRDWDDYVQPLTFAYNTQVHRSTETTPFDLVLTR-PPSGLI 567
BLAST of Gvermi5460.t1 vs. uniprot
Match: R7QMC5_CHOCR (Integrase catalytic domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QMC5_CHOCR) HSP 1 Score: 92.4 bits (228), Expect = 5.050e-18 Identity = 47/98 (47.96%), Postives = 63/98 (64.29%), Query Frame = 0
Query: 1 MLGMKQLYTTANHPQTNDQSVRFNKTIASRLKHYVADHQKDEDGYVGPLTYTYKLQIHRSTGTAPFNLMLSRNPPSSVLAVR----ATAHPVDGPQAP 94
+LG++ TTA HPQ+ Q+ RFN+T+ RL+H V DHQ+D D YV PLT+ Y Q+HRST T PF+L+L+R P +L A HP D P+ P
Sbjct: 687 LLGVRHYLTTAYHPQSKGQTERFNRTLVQRLRHLVEDHQRDWDDYVQPLTFAYNTQVHRSTETTPFDLVLTRPPCGLILPGTVPQDAGTHPED-PRTP 783 The following BLAST results are available for this feature:
BLAST of Gvermi5460.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gvermi5460.t1 ID=Gvermi5460.t1|Name=Gvermi5460.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=221bpback to top |