Gvermi5447.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi5447.t1
Unique NameGvermi5447.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length890
Homology
BLAST of Gvermi5447.t1 vs. uniprot
Match: A0A2V3IYY6_9FLOR (DNA polymerase kappa n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IYY6_9FLOR)

HSP 1 Score: 993 bits (2568), Expect = 0.000e+0
Identity = 529/866 (61.09%), Postives = 643/866 (74.25%), Query Frame = 0
Query:   23 NAFSSDPRPSNRNPNFIRDYFQSSRLHFIGSFRARYESMMVAIAKRLEVSPGSLIAPAPRSTSRERVIIHVDMDCFFASVAVKRDPSLRGKCVAVCHGGGEISSCSYEAREFGVRAGMFAKDARKLCPQLLSVPYHFPSYEEISIQIYSLFYDYPGVHVEAVSVDEAYLDATEAVGADKSQLNAENLAENIRSRIKMETGCTASAGIGPSKLIARLATKAAKPNGQLRVRPEKVIEYIDTLEVRDLPGVGWRTSKKMTELGIKGIPDLRSKSLSFLQSKFGDRQGHTFFELARAIDRRPVEPLKPRKSIGAEASWGIRFDQDEDEKLQKFITDMASEVASRVANAGASGSKMAVKLYRKKPNSSMMGYKFLGHGPCTIVSRIYNLPRNCGTQMVTNALRNSCNRVLSETKMRNDEFRGIGLQVLDLKFGDLKFDHSRTTTTGIKRIDSFFTAANNEISKGPDQTSNRRVKASAKDVKIRSSQTLLRGDKNGENNHEDPFGACGDEIEPEPVKNKDIQRRNELNDRHTTPRKESEVVPIDVDNDEIEMHNVDDDHAALLRQAGSSLTQRIPEGWDKAVFKALPYSLRKELVENKANQSLAN-AEGGAPEKPEHGEAAVTGSDPGDEKKRPSIHKRNKHVAKLSKRPRKRQKAQVTMTQFADIRELRNKGNDVLNAEEFRSKPLMECIELLQDLNHGRRHSALAGRRRCNAGKKNDNTKAVTITEQDKSDRG--RDKLDIPSPPSMSSDSDSNGGDKILKIVQREGVEHKQIYESEDIVLFSENLFAWMKCTAGEVKSAHVELLRGRLMEHIRLKELEQVSANVRLLRRFAESECMKGWRYSINTLLQEVQDETRRQHGLNLILPPLF 885
            N+F +DPRPSNRNPNF+RDYFQSSRLHFIGSFRARYE+MMVA+AKRL+V+PGSLI+ AP S+  ER+I+H+DMDCFFASVAVKRDPSLR KC+AVCHGGGEISSCSYEAR+FGVRAGMFAKDARKLCP LLSVPYHFP+YE+ISIQIY+LF+DYPGV VEAVSVDEAYLD T+      SQ  A++L ++IRSRI  ETGCTASAGIGPSKLIARLATKAAKPNGQLRVRPE VIEYIDTL+V DLPGVGW TSKKMT++GI+ IP LR KSLSFLQ+ FG+RQG T  +LARAID RPVEPLKPRKSIGAEASWGIRF+++ED+KL  FI+DMASEVASRV + GASGSK+ VKLYR+KPNSSM+GYKFLGHGPCTI+SR+YN+PR C    +  AL +SC RV+ ET++RNDEFRG+GLQV+DLKFG+L+FDHS     G+KRIDSFF  +N             R  +   DV   S          G ++ ++      DEI P                            P + D  EI   N   ++ A        LT +IP GWD AVFKALP SL+ EL++N  NQ+  + A      + E   AA T    G  KKR S   R ++VA+   RPR+RQ+AQ+TMTQFADIRELR+KGNDVL+AEEFR +PL EC+ELLQDLNHGRR+SA   R+R  +G   +  K+V+  E + +      + L+IPSPP MSSD DS+  +++L +V++ GVEH QIY +ED+  FS+ L++WM+ TA +VKS HVEL+RGRLME IRLK+L++V  NVRLL RFAE + ++GWR  +N LL+E+ +ETRRQHGL+L LPPLF
Sbjct:   23 NSFWNDPRPSNRNPNFVRDYFQSSRLHFIGSFRARYEAMMVAVAKRLKVNPGSLISAAPTSSCAERLIVHIDMDCFFASVAVKRDPSLRAKCIAVCHGGGEISSCSYEARKFGVRAGMFAKDARKLCPNLLSVPYHFPTYEQISIQIYALFHDYPGVFVEAVSVDEAYLDITDTAKDATSQAGADDLVQSIRSRIVRETGCTASAGIGPSKLIARLATKAAKPNGQLRVRPENVIEYIDTLKVSDLPGVGWSTSKKMTQIGIETIPQLRRKSLSFLQTNFGERQGQTLHDLARAIDSRPVEPLKPRKSIGAEASWGIRFEENEDDKLSNFISDMASEVASRVESVGASGSKVCVKLYRRKPNSSMLGYKFLGHGPCTILSRMYNIPRPCDWATLRKALCDSCLRVIKETRIRNDEFRGLGLQVVDLKFGELRFDHSGAPVKGVKRIDSFFNVSNRRAPASQATHGQLRKTSPPNDVDTASKA-------KGSSDRDEVLLEKEDEITPXXXXXXXXXXXXXXXXXXXXXXXXXXAQP-EEDGVEIVADNRIPNNGADKLPDNHGLTSKIPFGWDTAVFKALPESLQAELLQNNRNQTTTSRANTRRATRDETKSAAPTR---GASKKRASSRTRQRNVAR---RPRRRQRAQITMTQFADIRELRDKGNDVLDAEEFRCRPLKECVELLQDLNHGRRNSAFVNRQR-RSGVPTEKRKSVSFAEANSNRLAAVEETLEIPSPPCMSSDYDSDENNRMLHVVEKAGVEHTQIYATEDVTDFSDKLYSWMRRTAVDVKSGHVELVRGRLMECIRLKQLDEVCENVRLLHRFAEGDGLEGWRVGVNALLREIGEETRRQHGLDLKLPPLF 873          
BLAST of Gvermi5447.t1 vs. uniprot
Match: R7QH65_CHOCR (UmuC domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QH65_CHOCR)

HSP 1 Score: 726 bits (1873), Expect = 5.080e-248
Identity = 428/884 (48.42%), Postives = 573/884 (64.82%), Query Frame = 0
Query:   25 FSSDPRPSNRNPNFIRDYFQSSRLHFIGSFRARYESMMVAIAKRLEVSPGSLIAPAP-------RSTSRERVIIHVDMDCFFASVAVKRDPSLRGKCVAVCHGGGEISSCSYEAREFGVRAGMFAKDARKLCPQLLSVPYHFPSYEEISIQIYSLFYDYPGVHVEAVSVDEAYLDATEAVGADK--SQLNAENLAENIRSRIKMETGCTASAGIGPSKLIARLATKAAKPNGQLRVRPEKVIEYIDTLEVRDLPGVGWRTSKKMTELGIKGIPDLRSKSLSFLQSKFGDRQGHTFFELARAIDRRPVEPLKPRKSIGAEASWGIRFDQDEDEKLQKFITDMASEVASRVANAGASGSKMAVKLYRKKPNSSMMGYKFLGHGPCTIVSRIYNLPRNCGTQMVTNALRNSCNRVLSETKMRNDEFRGIGLQVLDLKFGDLKFDHSRTTTTG-IKRIDSFF-TAANNEISKGPDQTSNRRVKASAKDVKIRSSQTLL----RGDKNGENNHEDPFGACGDEIEPEPVKNKDIQRRNELNDRHTTP---RKESEVVPIDVDNDEIEMH--NVDDDHAALLRQA-GSSLTQR---IPEGWDKAVFKALPYSLRKELVENKANQSLANAEGGAPEKPEHGEAAVTGSDPGDEKKRPSIHKRN---KHVAKLSKRPRKRQKAQVTMTQFADIRELRNKGNDVLNAEEFRSKPLMECIELLQDLNHGRRHSALAGRRRCNAGKKNDNTKAVTITEQDKSDRGRDKLDIPSPPSMSSDSDSNGGDKILKIVQREGVEHKQIYESEDIVLFSENLFAWMKCTAGEVKSAHVELLRGRLMEHIRLKELEQVSANVRLLRRFAESECMKGWRYSINTLLQEVQDETRRQHGLNLIL 881
            F  DPRP+N NPNF+RDYF SSRLHFIGSFRARYESMMVA+A  L V+P  L+  +        ++T  ERVI+H+DMDCFFAS+AVK++P+L GK +AVCHGGGEISSCSYEAR+FGVRAG F +D RKLCP LLSVPY FP YEE S+ IY++FY  P V VEAVSVDEAYLD T A+G D+  SQ  A+ L  ++R +I   TGCTASAGIGPSKL+ARLATKAAKPNGQ+RVR E VI Y+DTL+V+DLPG+GWRT +++ E  I  +P LR+ SL+ LQS+FG RQG  F+ LARA+D RPVEPLKPRKSIGAEASWG+RF ++E++K +KFI DMA EVA+RV  AGA G+K+  K Y++K N+SM+GYK LGHGPC + +R   +      + +   LR +C R+ ++  + +DE RG+G+Q+ DL F DL FDH+  TT G  +RIDSFF TA  + I  G    S RR  A+     + SS+  L       K G  + E+PF       E E VK K  +R     +R  +P   + E+ +  I+ D D IE     V+   A  ++ A G +   R   IP+GWD+ VF  LP  L+ EL+++ ++   A A G  P +    EA     D    +  P   +RN   K  A  ++R ++R+  QVTMTQFADI  L+ +G++VL+AEEFR  PL +C+ELL DL  G+  +     R     ++N  T+     E ++ +   + L+IPSPPS+SSDSD  G   + ++V R+G E   +Y  E++  ++E L  WM+  AG+VKS HVEL+RGR++E +R K+LE+V + +RL+R F   E M  W    N +L +VQ+E R  +   L L
Sbjct:   17 FWRDPRPTNENPNFVRDYFASSRLHFIGSFRARYESMMVAVAANLAVNPRLLLQSSAEKGLLSAKTTRAERVIVHIDMDCFFASIAVKKNPALAGKPIAVCHGGGEISSCSYEARKFGVRAGTFFRDGRKLCPDLLSVPYEFPMYEEASLLIYAIFYSSPTVSVEAVSVDEAYLDITLAIGDDRHASQSGADALVRSLRDKIFASTGCTASAGIGPSKLVARLATKAAKPNGQMRVRQENVIAYLDTLQVKDLPGIGWRTGRRLREKSITTVPQLRALSLAELQSEFGGRQGQVFYNLARALDARPVEPLKPRKSIGAEASWGVRFTKEEEDKARKFIMDMADEVAARVEAAGAYGTKVVFKEYKRKKNASMVGYKHLGHGPCVVFTRSARIQTRSAGRPLKELLRQACIRLHNDLGLHSDELRGVGVQMTDLSFADLNFDHAEATTAGSTRRIDSFFETAVPSSIGNGLS-ISQRRKAANEAIKDLPSSRNGLGQVSNQSKGGAFDKEEPF-------EVEFVK-KHSERIEASKERMASPIDEQTETHLADIE-DEDRIEPAPAQVEFQRAPQVKDAVGKAHESRELDIPKGWDREVFHNLPKDLQDELLKSSSH---AIAAGHPPPR----EAEAVTDDTSAHRIAPPKRRRNPKPKPAAAQAERAKRRKAGQVTMTQFADISNLKKRGHNVLDAEEFREMPLRDCVELLGDLR-GKPLNV----RTLQTDRRNVETERTGRREGEEDEL--EDLEIPSPPSLSSDSD--GSCSMTEMVLRQGFEEGPVYAEEELSTYAEVLRVWMRTVAGDVKSGHVELIRGRVLELLRRKKLERVCSEMRLVRLFVGEEGMGAWVGHYNRILDDVQEECRVLYKFRLAL 874          
BLAST of Gvermi5447.t1 vs. uniprot
Match: A0A7S3A8F8_9RHOD (DNA polymerase kappa (Fragment) n=3 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A8F8_9RHOD)

HSP 1 Score: 384 bits (987), Expect = 2.240e-117
Identity = 212/438 (48.40%), Postives = 286/438 (65.30%), Query Frame = 0
Query:   30 RPSNRNPNFIRDYFQSSRLHFIGSFRARYESMMVAIAKRLEVSPGSLIAPAPRSTSRE----RVIIHVDMDCFFASVAVKRDPSLRGKCVAVCHG-GGEISSCSYEAREFGVRAGMFAKDARKLCPQLLSVPYHFPSYEEISIQIYSLFYDYPGVHVEAVSVDEAYLDATEA-----VGADKSQLN----AENLAENIRSRIKMETGCTASAGIGPSKLIARLATKAAKPNGQLRVRPEKVIEYIDTLEVRDLPGVGWRTSKKMTELGIKGIPDLRSKSLSFLQSKFGDRQGHTFFELARAIDRRPVEPLKPRKSIGAEASWGIRFDQDEDEKLQKFITDMASEVASRVANAGASGSKMAVKLYRKKPNSSMMGYKFLGHGPCTIVSRIYNLPRNCGTQMVTNALRNSCNRVLSETKMRNDEFRGIGLQVLDLKFGDL 453
            + +  NPNF+RDYF +SRLHFIGSFRARYES++ A+A     S   L+    + T++E    R IIH+DMDCFF SVAV +DPSL G  + VCH  GGEISS SYEARE GVRAGMF ++A KLCP+L  V Y F  YE ++ QIY +FY+   V VEAVSVDEA+LD T+A     + A   +L+    AE +A  IR RI  ETGC +SAGIG +KL+ARLATK AKPNGQ  +  E+ ++Y+  L VRDLPGVGW T  K+ ELG++   DL+ +SLS LQ+  G++ G + +   R  D + V+P+K RKS+GAEASWG+RF +DE  K+  F+ D+A+ V+ ++  A A G ++ +K+Y K  N+S+  +K LGHGPC I +R     R    + +          +L+  K+   E RG+G+QV DL F D+
Sbjct:  210 KSTRENPNFVRDYFSASRLHFIGSFRARYESLIAAVAMHRGCSASDLLRT--KGTTKENGVMRSIIHIDMDCFFVSVAVAKDPSLAGIPLVVCHQHGGEISSASYEAREKGVRAGMFFREAVKLCPELKIVTYRFEDYERVTFQIYCIFYELSPV-VEAVSVDEAFLDVTDADLPQDILAAMPELSNMPPAERIALTIRRRIAEETGCPSSAGIGANKLLARLATKRAKPNGQFYLSDEEAVQYVADLPVRDLPGVGWSTGGKLQELGVERCDDLQRRSLSQLQALVGEKNGESLYRACRGQDDKQVQPMKVRKSLGAEASWGVRFYEDEGLKMHDFVRDLAAVVSEKLQEARAVGQRITIKVYWKMKNASLP-HKTLGHGPCDIYNRSVKTERTSDAKTIAE----KSIELLNAVKIPPQELRGLGIQVHDLVFLDI 639          
BLAST of Gvermi5447.t1 vs. uniprot
Match: A0A087ST14_AUXPR (DNA repair protein REV1 n=1 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A087ST14_AUXPR)

HSP 1 Score: 303 bits (776), Expect = 1.260e-90
Identity = 174/420 (41.43%), Postives = 251/420 (59.76%), Query Frame = 0
Query:   29 PRPSNRNPNFIRDYFQSSRLHFIGSFRARYESMMVAIAKRLEVSPGSLIAPAPRSTSRERVIIHVDMDCFFASVAVKRDPSLRGKCVAVCH-----GGGEISSCSYEAREFGVRAGMFAKDARKLCPQLLSVPYHFPSYEEISIQIYSLFYDYPGVHVEAVSVDEAYLDATEAVGADKSQLNAENLAENIRSRIKMETGCTASAGIGPSKLIARLATKAAKPNGQLRVRPEKVIEYIDTLEVRDLPGVGWRTSKKMTELGIKGIPDLRSKSLSFLQSKFGDRQGHTFFELARAIDRRPVEPLKPRKSIGAEASWGIRFDQDEDEKLQKFITDMASEVASRVANAGASGSKMAVKLYRKKPNSSMMGYKFLGHGPCTIVSRIYNLPRNCGTQMVTNALRNSCNRVLSETKMRNDEFRGIGL 443
            P+ S  +PNF+  +F +SRLHFIG ++ R ES+M++         G +  P P      +VI HVD+DCFFASVA    P   GK +AVCH     G  EISS +YEAR++G+RAGMF   A++LCP L+ VPY+F  Y+E+S Q Y +        V+ +S DEA+LD T     D  QL     A  +R+ I+  TGCTAS GIG + LIARLATK AKP+GQ  ++  +    + +LE+ DLPGVGW TSKK+  LG++ + DL++ S + LQ++ GD+ G   ++ +R ID R V P   RKS+GAE +WG+RFD  +D    +F+  +A EV +R+  AG  G  + +KL +K+        KF+GHG C  +SR +   R   +    +  R +C+ +L+   + + + RGIGL
Sbjct:   33 PKSSRDDPNFVESFFSASRLHFIGMWKTRLESLMLS---------GVIGGPTPNPGPGAQVIFHVDLDCFFASVAESEHPLFSGKPLAVCHSNNAKGTAEISSANYEARKYGIRAGMFMAGAKQLCPDLIVVPYNFERYQEVSEQAYKIMMACSAC-VQPLSCDEAFLDVTGL--GDPFQL-----ASRLRADIQAATGCTASVGIGHNLLIARLATKRAKPDGQCHIQEAEAASAMLSLELSDLPGVGWATSKKLASLGLQSVADLQAWSKARLQAELGDKTGAALWDASRGIDTRRVAPPAVRKSLGAEVNWGVRFDSPQD--ATRFLGKLAEEVWTRMGAAGVQGRSLTLKL-KKRKEGVYNPVKFMGHGICDNLSRTHTFHRPAHSAATIH--RAACD-MLTSLHVPHADIRGIGL 429          
BLAST of Gvermi5447.t1 vs. uniprot
Match: M2XRA8_GALSU (DNA repair protein REV1 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XRA8_GALSU)

HSP 1 Score: 315 bits (806), Expect = 5.150e-90
Identity = 240/731 (32.83%), Postives = 355/731 (48.56%), Query Frame = 0
Query:   32 SNRNPNFIRDYFQSSRLHFIGSFRARYESMMVAIAKRLEVSPGSLIA-PAPRSTSRERVIIHVDMDCFFASVAVKRDPSLRGKCVAVCHG---------GGEISSCSYEAREFGVRAGMFAKDARKLCPQLLSVPYHFPSYEEISIQIYSLFYDYPGVHVEAVSVDEAYLDATEAV----GADKSQLNAENLAENIRSRIKMETGCTASAGIGPSKLIARLATKAAKPNGQLRVRPEKVIEYIDTLEVRDLPGVGWRTSKKMTELGIKGIPDLRSKSLSFLQSKFGDRQGHTFFELARAIDRRPVEPLKPRKSIGAEASWGIRFDQD--EDEKLQK------FI-------------TDMASEVASRVANAGASGSKMAVKLYRKKPNSSMMGYKFLGHGPCTIVSRIYNLPRN-----CGTQMVTNALRNSCNRVLSETKMRNDEFRGIGLQVLDLKFGDLKFDHSRTTTTGIKRIDSFFTAANNEISKGPDQTSNRRVKASAKDVKIRSSQTLLRGDKNGENNHEDPFGACGDEIEPEPVKNKDIQRRNELNDRHTTPRKESEVVPIDVDNDEIEMHNVDDDHAALLRQAGSSLTQRIPE-GWDKAVFKALPYSLRKELVEN--KANQSLANAEGGAPEKPEHGEAAVTGSDPGDEKKRPSIHKRNKHVAKLSKRPRKRQKAQVTMTQFADIRELRNKG-NDVLNAEEFRSKPLMECIELLQDLNHGRR 718
            +N NPNF+RD+F  SRLHFIGSFRARYE ++     R+    G+L   P  RS + ERVI HVDMDCFFA+V++ + PSLR + +AVCH            EISS +YEAR FG+ AGMF  +ARKL P L++VPY F +YE+ S  IY  F +Y    VEAVSVDEAYL+ T  V      DK   N E+LA  +R  I+  +GCTAS GIG +K +ARLATK AKPNGQ  +   + +E +  L V +LPGVGW T +++  + I     LR  SL  L+ +FG +   + FE  R  D RP+E  +P KSIGAE +WG+RF+ +     ++QK      F+             T     V  R+  A A  +K+  K+ RK+ N+     K+LG G     S+  + P +      G + +T  L  S N  L       DE RG+G+    L+F      H +   +GI  +  +F     ++ + P Q    R+    K  ++ S Q ++                                   + ND   +P                             +++  SL + I + GW + VF  LP  +++EL+++    NQ +             G ++   S    ++ R   +K N                Q T+TQ  DI + +++G + ++ AEEF+++ + EC+E+LQD+ H ++
Sbjct:  187 TNENPNFVRDFFAQSRLHFIGSFRARYEKILA----RMVAEEGTLCKLPYDRSKTSERVIFHVDMDCFFAAVSLAKTPSLRNQPIAVCHARQNSEIVDSSCEISSANYEARAFGIHAGMFVGEARKLAPSLITVPYDFEAYEKTSELIYRKFLEY-AERVEAVSVDEAYLEMTGIVLPVRMKDKEIRNIEDLAMELRLEIERISGCTASIGIGSNKTLARLATKKAKPNGQFAIWSHQAMEKLSLLPVEELPGVGWMTRRRLHSMNIFICQQLRELSLERLEKEFGKQTALSIFETCRGKDERPLELYRPPKSIGAEVNWGVRFENNLQRSREMQKIHIGYRFVIMLCCFYDGISVNTMPVDVVCERLKAADAKATKLTYKVLRKQRNAPPPR-KYLGCGLVDEFSKSTSFPISDSALEIGPRCLT--LHESLNIPL-------DELRGVGIHCFGLEFSS---HHHKRHNSGIT-LSKYF-----QLDRNPQQL---RIDGCLKMSRMPSKQNIMGK----------------------------TMYHEKSNDIRVSPNN---------------------------KRSNHSLDELITKNGWSREVFVELPNEIQQELLKDAQSCNQRVF-----------WGNSSAMSSFGVSKRARSKCNKTNPSFL------------QPTLTQLDDIYQAKDQGLSQLVVAEEFQTRSIRECLEILQDVEHAKK 812          
BLAST of Gvermi5447.t1 vs. uniprot
Match: A0A2P6TQ91_CHLSO (DNA polymerase kappa n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TQ91_CHLSO)

HSP 1 Score: 318 bits (814), Expect = 2.120e-89
Identity = 176/422 (41.71%), Postives = 254/422 (60.19%), Query Frame = 0
Query:   29 PRPSNRNPNFIRDYFQSSRLHFIGSFRARYESMMVAIAKRLEVSPGSLIAPAPRSTSRERVIIHVDMDCFFASVAVKRDPSLRGKCVAVCH-----GGGEISSCSYEAREFGVRAGMFAKDARKLCPQLLSVPYHFPSYEEISIQIYSLFYDYPGVHVEAVSVDEAYLDATEAVGADKSQLNAENLAENIRSRIKMETGCTASAGIGPSKLIARLATKAAKPNGQLRVRPEKVIEYIDTLEVRDLPGVGWRTSKKMTELGIKGIPDLRSKSLSFLQSKFGDRQGHTFFELARAIDRRPVEPLKPRKSIGAEASWGIRFDQDEDEKLQKFITDMASEVASRVANAGASGSKMAVKLYRKKPNSSMMGYKFLGHGPCTIVSRIYNLPRNCGTQMVTNALRNSCNRVLSETKMRNDEFRGIGLQV 445
            P+ +  +PNF++ +++SSRLHFIG+++AR E++M + A R    P      AP    R RV++H+DMDCFFASVA    P  +GK +AVCH     G GE+S+C+YEAR FGVR+GM    A+ LCP L+ VPY F  YEE S ++Y +   +    V+A+S DEAYLD T  +G      + E LA  IR+ I   TGCTASAGIGP+ L+AR+AT  AKPNGQL V      +Y+  L V+DLPGVGW T +K+   GI  + D+ ++S   LQS+ G + G   ++ A   D R VEP K RKS+GAE +WG+RF  D+D +  + +  +A++V  R+      G ++ +KL R+K  ++    KF+GHG C  +SR   L R   +      +   C  +L  +++   + RG+G+ V
Sbjct:  310 PKSTRDDPNFVQSFYKSSRLHFIGTWKARIETLMESDAARRGPQP------APHLPGRPRVVMHIDMDCFFASVAEAAHPVFKGKPLAVCHSASAHGTGEVSTCNYEARAFGVRSGMMISRAKDLCPDLIVVPYMFDKYEETSEKVYGILLRHSAC-VQALSCDEAYLDVT-GLG------DPEQLAATIRAEIAAATGCTASAGIGPNPLLARIATDHAKPNGQLAVTQAAAAQYLQALPVKDLPGVGWSTEQKLESRGITTVADVLARSKELLQSELGPKLGAQLWDYAHGRDDRRVEPPKKRKSVGAEVNWGVRFQSDDDAR--RLLDSIAADVQQRLQQGSLKGRRLTLKLKRRKQGAAEP-LKFMGHGECDNLSRSVTLARFTDS---AEDIGRECWELLRASRVPFADIRGMGITV 711          
BLAST of Gvermi5447.t1 vs. uniprot
Match: A0A1D1ZNW1_AUXPR (Uncharacterized protein n=1 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A1D1ZNW1_AUXPR)

HSP 1 Score: 306 bits (784), Expect = 5.770e-89
Identity = 177/443 (39.95%), Postives = 261/443 (58.92%), Query Frame = 0
Query:   29 PRPSNRNPNFIRDYFQSSRLHFIGSFRARYESMMVAIAKRLEVSPGSLIAPAPRSTSRERVIIHVDMDCFFASVAVKRDPSLRGKCVAVCH-----GGGEISSCSYEAREFGVRAGMFAKDARKLCPQLLSVPYHFPSYEEISIQIYSLFYDYPGVHVEAVSVDEAYLDATEAVGADKSQLNAENLAENIRSRIKMETGCTASAGIGPSKLIARLATKAAKPNGQLRVRPEKVIEYIDTLEVRDLPGVGWRTSKKMTELGIKGIPDLRSKSLSFLQSKFGDRQGHTFFELARAIDRRPVEPLKPRKSIGAEASWGIRFDQDEDEKLQKFITDMASEVASRVANAGASGSKMAVKLYRKKPNSSMMGYKFLGHGPCTIVSRIYNLPRNCGTQMVTNALRNSCNRVLSETKMRNDEFRGIGLQVLDLKFGDLKFDHSRTTTTGIK 466
            P+ S  +PNF+  +F +SRLHFIG ++ R ES+M++         G +  P P      +VI HVD+DCFFASVA    P   GK +AVCH     G  EISS +YEAR++G+RAGMF   A++LCP L+ VPY+F  Y+E+S Q Y +        V+ +S DEA+LD T     D  QL     A  +R+ I+  TGCTAS GIG + LIARLATK AKP+GQ  ++  +    + +LE+ DLPGVGW TSKK+  LG++ + DL++ S + LQ++ GD+ G   ++ +R ID R V P   RKS+GAE +WG+RFD  +D    +F+  +A EV +R+  AG  G  + +KL +K+        KF+GHG C  +SR +   R   +    +  R +C+ +L+   + + + RGIGL V +L   + + D  +   + ++
Sbjct:  233 PKSSRDDPNFVESFFSASRLHFIGMWKTRLESLMLS---------GVIGGPTPNPGPGAQVIFHVDLDCFFASVAESEHPLFSGKPLAVCHSNNAKGTAEISSANYEARKYGIRAGMFMAGAKQLCPDLIVVPYNFERYQEVSEQAYKIMMACSAC-VQPLSCDEAFLDVTGL--GDPFQL-----ASRLRADIQAATGCTASVGIGHNLLIARLATKRAKPDGQCHIQEAEAASAMLSLELSDLPGVGWATSKKLASLGLQSVADLQAWSKARLQAELGDKTGAALWDASRGIDTRRVAPPAVRKSLGAEVNWGVRFDSPQD--ATRFLGKLAEEVWTRMGAAGVQGRSLTLKL-KKRKEGVYNPVKFMGHGICDNLSRTHTFHRPAHSAATIH--RAACD-MLTSLHVPHADIRGIGLGVRELCHWEERIDWGQAVASMVQ 652          
BLAST of Gvermi5447.t1 vs. uniprot
Match: A0A7S0ZB95_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZB95_9RHOD)

HSP 1 Score: 303 bits (776), Expect = 6.670e-88
Identity = 173/427 (40.52%), Postives = 247/427 (57.85%), Query Frame = 0
Query:   32 SNRNPNFIRDYFQSSRLHFIGSFRARYESMMVAIAKRLEVSPGSLIAPAPRSTSR-------ERVIIHVDMDCFFASVAVKRDPSLRGKCVAVCHGG----------GEISSCSYEAREFGVRAGMFAKDARKLCPQLLSVPYHFPSYEEISIQIYSLFYDYPGVHVEAVSVDEAYLDAT------------EAVGADKSQLNAENLAENIRSRIKMETGCTASAGIGPSKLIARLATKAAKPNGQLRVRPEKVIEYIDTLEVRDLPGVGWRTSKKM-TELGIKGIPDLRSKSLSFLQSKFGDRQGHTFFELARAIDRRPVEPLKPRKSIGAEASWGIRFDQDEDE--KLQKFITDMASEVASRVANAGASGSKMAVKLYRKKPNSSMMGYKFLGHGPCTIVSRIYNLPRNCGTQMVTNALRNSCNR 426
            ++ N NF++D+F  SRLHFIGSFRARYE +M  +A+RL +  G+ +     +          ER+++H+DMD FFAS A+  DPSLRG  V VCH            GEIS+ +YEAR +G+RAGMF K A ++CP + SVPY F  YE+++ ++ +L + +  + VE  SVDEAY+D T            + V   K++ + +     +R+RI+ ETGCTAS GIG +KL ARLATK AKPNG  R+ P++   ++  L++RDLPG+G+RT +K+ TEL +K    LR  S + LQ+ FG   G   +E  R      V PL  RKSI A   WG+RF   + E  K  +F+  +A EVA R   A A GS+++V+L + K N+    YK LG G C  +    ++      + + N L   C R
Sbjct:  242 TSENVNFVKDFFAQSRLHFIGSFRARYEQLMENVAERLGMKSGNALLQDSVTCQEQGEHMFVERIVLHIDMDAFFASCAISVDPSLRGHPVVVCHSSSTSSHAVTSRGEISAANYEARSYGIRAGMFLKTALQMCPHVKSVPYDFELYEKVATKVITLLHAFARL-VEVRSVDEAYIDLTGQDTWPVRGKEMKEVKPLKTKSDVDEFCRELRNRIEAETGCTASIGIGSNKLAARLATKKAKPNGIYRILPDETESFVAQLKIRDLPGIGYRTCEKLETELRVKTTEQLRKLSKTALQNVFGANAGVLIYECVRGRSNEKVIPLAARKSISATVGWGVRFGAGDTEYNKAVRFVVSLAEEVADRARQADAVGSRVSVELLKAKSNAGEP-YKLLGQGSCDRIRSSASILFAHNQESLRNELTKVCER 666          
BLAST of Gvermi5447.t1 vs. uniprot
Match: A0A8J4AXY4_9CHLO (Uncharacterized protein n=1 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4AXY4_9CHLO)

HSP 1 Score: 313 bits (803), Expect = 3.240e-87
Identity = 186/454 (40.97%), Postives = 265/454 (58.37%), Query Frame = 0
Query:    3 PQDNVGTEGVSATPARVKDNNAFSSDPRPSNRN-PNFIRDYFQSSRLHFIGSFRARYESMMVAIAKRLEVSPGSLIAPAPRSTSRERVIIHVDMDCFFASVAVKRDPSLRGKCVAVCH-----GGGEISSCSYEAREFGVRAGMFAKDARKLCPQLLSVPYHFPSYEEISIQIYSLFYDYPGVHVEAVSVDEAYLDATEAVGADKSQLNAENLAENIRSRIKMETGCTASAGIGPSKLIARLATKAAKPNGQLRVRPEKVIEYIDTLEVRDLPGVGWRTSKKMTELGIKGIPDLRSKSLSFLQSKFGDRQGHTFFELARAIDRRPVEPLKPRKSIGAEASWGIRFDQDED--EKLQKFITDMASEVASRVANAGASGSKMAVKLYRKKPNSSMMGYKFLGHGPCTIVSRIYNLPRNCGTQMVTNALRNSCNRVLSETKMRNDEFRGIGLQVLDL 448
            P+DN   +   A  + ++  +  +  P  S RN P F+  +F++SRLHFIG+++ R E++M  +        G+   PAP +   ERV+IHVDMDCFFAS A    P L GK VAVCH     G GE+SS +Y AR FGVRA MF  +A++ CP L+ VPY F  Y+ IS Q+Y +   Y  + V+ VS DEA+LD T  +G      + E LA  +R+ I   T CTASAGIGP+ L+A+LAT+ AKPNGQ RV    V+ ++  L+V DLPGVGW  + K+  LGI  +  + S S + LQ + G + G   +  A  +D R VEP K RKS+GAE ++GIRF+ D     + ++F+ ++A EVA+R+  AG  G  + +K+ R++  +     KF+GHG C  +SR   L R   T   T+ LR     +L    +  +E RG+G+ V  L
Sbjct:  424 PRDNSSPQAAQALASELRAASDLARGPPRSTRNDPRFMETFFKASRLHFIGTWKTRIEALMAEVE-------GAAPNPAPYTKGTERVVIHVDMDCFFASAAAVGRPELAGKPVAVCHSNSARGTGEVSSANYLARSFGVRADMFIAEAKRRCPDLIVVPYEFERYQTISEQVYRILMSYTSI-VQPVSCDEAFLDVT-GLG------DPEQLAARLRAEIAAATECTASAGIGPNILVAKLATRRAKPNGQFRVTQGTVLNFLGDLKVEDLPGVGWSMASKLEGLGISTVRQVWSTSRTLLQKQLGAKVGADLWAHAHGLDDRRVEPPKARKSVGAEINYGIRFEADAAGLAEAERFLGELAGEVAARLKTAGVRGRSLVLKVKRRQAGAPQPA-KFMGHGACDNISRSVTLSRF--TDDPTD-LRREAVGLLRALNIPPEELRGLGITVAKL 858          
BLAST of Gvermi5447.t1 vs. uniprot
Match: A0A6U9RMQ7_9CHLO (DNA repair protein REV1 n=1 Tax=Picocystis salinarum TaxID=88271 RepID=A0A6U9RMQ7_9CHLO)

HSP 1 Score: 305 bits (782), Expect = 1.890e-86
Identity = 175/429 (40.79%), Postives = 258/429 (60.14%), Query Frame = 0
Query:   29 PRPSNRNPNFIRDYFQSSRLHFIGSFRARYESMMVAIAKRLEVSPGSLIAPAPRSTSRERVIIHVDMDCFFASVAVKRDPSLRGKCVAVCH-----GGGEISSCSYEAREFGVRAGMFAKDARKLCPQLLSVPYHFPSYEEISIQIYSLFYD-YPGVHVEAVSVDEAYLDATEAVGADKSQLNAENLAENIRSRIKMETGCTASAGIGPSKLIARLATKAAKPNGQLRVRPEKVIEYIDTLEVRDLPGVGWRTSKKMTELGIKGIPDLRSKSLSFLQSKFGDRQGHTFFELARAIDRRPVEPLKPRKSIGAEASWGIRFDQDEDEKLQKFITDMASEVASRVANAGASGSKMAVKLYRKKPNSSMMGYKFLGHGPCTIVSRIYNLPRNCGTQMVTNALRNSCNRVLSETKMRNDEFRGIGLQVLDLKFG 451
            PR ++ +PNF+  YF++SRLHFIG+++ R E++M+      +VS   ++ P  +     R I+HVDMDCFFASVA+ ++P  RGK + VCH     G  E+SS +YEAR+FGVRA MF  +A++LCPQL+ +PY F  Y+++S  +Y + ++ +PG  V+ VS DEAY+DAT          +  + A  +RS I   TGCTASAGI  + L++++AT  AKPNGQL V  E+ + ++ +++V +LPGVGW T +K+T + I    DL     S LQ +FG + G   F   R ID R VE    RKSIGAE +WG+RF+ + +    KF+ D+  E+  R+ +A   G  + +KL RK+  ++   YKFLGHG C  +S+   L  +C        L NSC  +    +   +E RG+G+ V  L  G
Sbjct:  198 PRSASHDPNFMDTYFKASRLHFIGTWKERIENLMI------KVSQEQVVPPIRQDGHFTRAIMHVDMDCFFASVAMLKNPHARGKPLVVCHSNSNQGRAEVSSANYEARKFGVRANMFIGEAKRLCPQLIVMPYQFDLYQDVSEAVYLIMFEMFPG-RVQPVSCDEAYIDATNLD-------DPISWASKVRSEIFSRTGCTASAGISCNMLLSKIATGRAKPNGQLFVSFEEGVAFLKSMKVAELPGVGWSTRQKLTAMNIDICADLVEVPKSVLQQEFGQKTGELLFNHCRGIDGRKVETQPVRKSIGAEVNWGVRFNHEAE--AIKFMEDLCGEIQKRLRHAKLKGRCVTLKLKRKQQGANEP-YKFLGHGKCDNLSKSLTLA-SCIDD--AKELMNSCLSLWQSMRFPANELRGVGISVTRLDNG 606          
The following BLAST results are available for this feature:
BLAST of Gvermi5447.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IYY6_9FLOR0.000e+061.09DNA polymerase kappa n=1 Tax=Gracilariopsis chorda... [more]
R7QH65_CHOCR5.080e-24848.42UmuC domain-containing protein n=1 Tax=Chondrus cr... [more]
A0A7S3A8F8_9RHOD2.240e-11748.40DNA polymerase kappa (Fragment) n=3 Tax=Rhodosorus... [more]
A0A087ST14_AUXPR1.260e-9041.43DNA repair protein REV1 n=1 Tax=Auxenochlorella pr... [more]
M2XRA8_GALSU5.150e-9032.83DNA repair protein REV1 n=1 Tax=Galdieria sulphura... [more]
A0A2P6TQ91_CHLSO2.120e-8941.71DNA polymerase kappa n=1 Tax=Chlorella sorokiniana... [more]
A0A1D1ZNW1_AUXPR5.770e-8939.95Uncharacterized protein n=1 Tax=Auxenochlorella pr... [more]
A0A7S0ZB95_9RHOD6.670e-8840.52Hypothetical protein (Fragment) n=1 Tax=Timspurcki... [more]
A0A8J4AXY4_9CHLO3.240e-8740.97Uncharacterized protein n=1 Tax=Volvox africanus T... [more]
A0A6U9RMQ7_9CHLO1.890e-8640.79DNA repair protein REV1 n=1 Tax=Picocystis salinar... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR043128Reverse transcriptase/Diguanylate cyclase domainGENE3D3.30.70.270coord: 90..252
e-value: 2.5E-60
score: 204.9
NoneNo IPR availableGENE3D1.10.150.20coord: 253..316
e-value: 1.1E-14
score: 56.2
NoneNo IPR availableGENE3D3.40.1170.60coord: 107..156
e-value: 2.5E-60
score: 204.9
NoneNo IPR availableGENE3D6.10.250.1490coord: 36..70
e-value: 9.8E-7
score: 30.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 504..527
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 724..774
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 651..671
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 728..756
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 511..527
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 618..677
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 628..650
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..31
NoneNo IPR availablePANTHERPTHR45990DNA REPAIR PROTEIN REV1coord: 18..868
IPR038401Rev1, C-terminal domain superfamilyGENE3D1.20.58.1280coord: 788..881
e-value: 1.4E-5
score: 27.5
IPR001126UmuC domainPFAMPF00817IMScoord: 93..241
e-value: 6.5E-44
score: 149.5
IPR001126UmuC domainPROSITEPS50173UMUCcoord: 90..272
score: 52.922009
IPR017961DNA polymerase, Y-family, little finger domainPFAMPF11799IMS_Ccoord: 328..448
e-value: 1.1E-5
score: 25.9
IPR036775DNA polymerase, Y-family, little finger domain superfamilyGENE3D3.30.1490.100coord: 327..454
e-value: 8.8E-27
score: 95.7
IPR022880DNA polymerase IVHAMAPMF_01113DNApol_IVcoord: 87..470
score: 28.335047
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 73..322

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24228contigScGOVlb_24228:2091745..2094414 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi5447.t1Gvermi5447.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24228 2091745..2094414 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi5447.t1 ID=Gvermi5447.t1|Name=Gvermi5447.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=890bp
MPPQDNVGTEGVSATPARVKDNNAFSSDPRPSNRNPNFIRDYFQSSRLHF
IGSFRARYESMMVAIAKRLEVSPGSLIAPAPRSTSRERVIIHVDMDCFFA
SVAVKRDPSLRGKCVAVCHGGGEISSCSYEAREFGVRAGMFAKDARKLCP
QLLSVPYHFPSYEEISIQIYSLFYDYPGVHVEAVSVDEAYLDATEAVGAD
KSQLNAENLAENIRSRIKMETGCTASAGIGPSKLIARLATKAAKPNGQLR
VRPEKVIEYIDTLEVRDLPGVGWRTSKKMTELGIKGIPDLRSKSLSFLQS
KFGDRQGHTFFELARAIDRRPVEPLKPRKSIGAEASWGIRFDQDEDEKLQ
KFITDMASEVASRVANAGASGSKMAVKLYRKKPNSSMMGYKFLGHGPCTI
VSRIYNLPRNCGTQMVTNALRNSCNRVLSETKMRNDEFRGIGLQVLDLKF
GDLKFDHSRTTTTGIKRIDSFFTAANNEISKGPDQTSNRRVKASAKDVKI
RSSQTLLRGDKNGENNHEDPFGACGDEIEPEPVKNKDIQRRNELNDRHTT
PRKESEVVPIDVDNDEIEMHNVDDDHAALLRQAGSSLTQRIPEGWDKAVF
KALPYSLRKELVENKANQSLANAEGGAPEKPEHGEAAVTGSDPGDEKKRP
SIHKRNKHVAKLSKRPRKRQKAQVTMTQFADIRELRNKGNDVLNAEEFRS
KPLMECIELLQDLNHGRRHSALAGRRRCNAGKKNDNTKAVTITEQDKSDR
GRDKLDIPSPPSMSSDSDSNGGDKILKIVQREGVEHKQIYESEDIVLFSE
NLFAWMKCTAGEVKSAHVELLRGRLMEHIRLKELEQVSANVRLLRRFAES
ECMKGWRYSINTLLQEVQDETRRQHGLNLILPPLFSNLN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR043128Rev_trsase/Diguanyl_cyclase
IPR038401Rev1_C_sf
IPR001126UmuC
IPR017961DNA_pol_Y-fam_little_finger
IPR036775DNA_pol_Y-fam_lit_finger_sf
IPR022880DNApol_IV
IPR043502DNA/RNA_pol_sf