Gvermi5420.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male
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Overview
Homology
BLAST of Gvermi5420.t1 vs. uniprot
Match: A0A2V3IW98_9FLOR (Zinc finger protein CONSTANS-LIKE 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IW98_9FLOR) HSP 1 Score: 469 bits (1206), Expect = 1.040e-159 Identity = 283/451 (62.75%), Postives = 331/451 (73.39%), Query Frame = 0
Query: 1 MVDPSNLRFMRMTPNLRDIVSGLSHPTPDPTTHINDILASPDPAPFYNSLTFASPTFRDLYSSPNPVGSSAL-TPATTSPYESSHNRMQRIAGTRAQMNALFNPPNPFSLDAENHSDSNHDGVISLMSTPDLRHATPHLPLSDPS-PFLRTKPQAEMAHTQSHSQPRESQSSSVTPPPDTSVLSPTTSPEITSKVHLVKPLE------DANTPAPNASSSKESHSKPPSLKPKQSATTEQNKQKNEPQNTKTPVSSSTSLSSALPA--PAVHPLHANTIPFNPAMAGLIPYA--IPAHFSSQMLANAVSAQYSGRPVAFMPGASPNDFLQYNMLAHATAYHLGTAQAMQAAGRALQAGMSPTTPPAKRPEPMSGSRKKRRRQMLDRSGCSVEQARENRARALKRLRHKKSMRTQGTAVRYACRKRIAMVRPRVNGRFATKEEVEECRRAQQ 439
M+DPSNLR+MRMTPNLRD+VSGLS PTPDP H++DILASPDP+PFYNSLTFA+P RDLY S +P+ SSAL T + +++ RMQRIAG RA+MNALFN P + D EN SDSNHDGVISL+STPDLRH+ H+P D S P+LR+KP+A + S SQPR S+SSSVTPPPDTS+LSPTTSPE TS V L+ DA N SK+ ++ K T Q K +P + P +SST+LSSAL + P H AN + NPAMAGLIPYA +PA FSSQM+A + A + GRPVAF+PG D LQYNM+A A A+H GTAQAMQ AGR LQ+ MSPT KRP+ + GSRKKRRRQML+RSGC+VEQARENRARALKRLR KKSMRTQG +VRYACRKRIAMVRPRVNGRFATKEEVEE RRA+Q
Sbjct: 44 MIDPSNLRYMRMTPNLRDMVSGLSQPTPDPAAHMHDILASPDPSPFYNSLTFATPILRDLYPSHSPITSSALPTHPNNADSDNASRRMQRIAGARAEMNALFNALTPTNPDTENGSDSNHDGVISLISTPDLRHSASHVPSVDTSNPYLRSKPEATPVNHPSDSQPRGSESSSVTPPPDTSILSPTTSPETTSTAQPVTTLKQNCSLTDAVKADDNKHHSKQRDNQNSRTDIKSDPTATQQKSA-KPLSKAAPGTSSTALSSALSSSVPNSHTA-ANAVAMNPAMAGLIPYACSLPAAFSSQMMAGQIPAHFPGRPVAFVPGNPSADLLQYNMMAQAAAFHFGTAQAMQVAGRVLQSTMSPTAAQQKRPDAIGGSRKKRRRQMLERSGCTVEQARENRARALKRLRQKKSMRTQGNSVRYACRKRIAMVRPRVNGRFATKEEVEEVRRARQ 492
BLAST of Gvermi5420.t1 vs. uniprot
Match: R7Q4Q6_CHOCR (CCT domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q4Q6_CHOCR) HSP 1 Score: 157 bits (397), Expect = 2.090e-40 Identity = 98/177 (55.37%), Postives = 121/177 (68.36%), Query Frame = 0
Query: 266 ANTIPFNPAMAGLIPYA--IPAHFSSQMLANAVSAQYSGRPVAFMPGASPNDFLQYNMLAHATAYHLGTAQAMQAAGRALQ--AGMSPTTP-PAKRPEPMSGSRKKRRRQMLDRSGCSVEQARENRARALKRLRHKKSMRTQGTAVRYACRKRIAMVRPRVNGRFATKEEVEECRRA 437
AN NP MAGL+P+A +P+ ML + Y GRPVAF+ GA+ + + +M A ATA G A A A R + AG P P PA E + GSRK+RRRQ+L+RSGC+ EQAR+NRA AL RLR KK++R+Q + VRYACRKRIAMVRPRVNGRFATKEEVEEC+R+
Sbjct: 187 ANAAAMNPGMAGLLPFACAMPSPMG-HMLPPPGAMHYQGRPVAFVTGANGTEIIPMDMFAQATALQYGAA-AQAAMSRMMHPVAGQGPVPPRPAPHFEAIGGSRKRRRRQLLERSGCTEEQARQNRAHALTRLRQKKTLRSQQSKVRYACRKRIAMVRPRVNGRFATKEEVEECKRS 361 The following BLAST results are available for this feature:
BLAST of Gvermi5420.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 2
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gvermi5420.t1 ID=Gvermi5420.t1|Name=Gvermi5420.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=440bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
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