Gvermi5415.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi5415.t1
Unique NameGvermi5415.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length647
Homology
BLAST of Gvermi5415.t1 vs. uniprot
Match: A0A2V3IW49_9FLOR (Protein kinase domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IW49_9FLOR)

HSP 1 Score: 607 bits (1565), Expect = 8.850e-202
Identity = 338/568 (59.51%), Postives = 416/568 (73.24%), Query Frame = 0
Query:   90 LPAEHRITPSTVVDQLSFATSVTPSLLHAAPPEYASSSMSSAISLRHKSSQLLDTPADTQSAQSPQHSVSSSPRRPPSPKPTPDPLDSKPHH--------DADHSRQIEKDALGV-IAAAIADGHYSLVLSTLRTQHNSHAVAVVACTFLESVCRDKRLYFDFCEEGGIEQFISAVLLFGKIDAALCTIFFHAISALSSHHDDRVSHRLRGMGVPSVVIDMLAHYRTDTAIQSAGCECLALMARSSQQSQTAIATLGGPGIVYRAITQNNCSFRDVKLARASLRAVRYIAANNEKAAEYLVQVAALDPVSSAAELFTEAGLEQDILDAMEAFSFYANGRRSIIMSSGMNALATIMLRNREPRFLVQCCNFIRAIARWNDSECESAVLQSAISERVVALMEMSNNIVGMEGARLGWYACYACTFLASFGSRTRQRLLRIGAIEGAIDVLKRRKDDAKVVHIATDALAELMKNEPAAKNLAMDYKIVGCLKEALVLHRRMGRVAKALQWTLEYLAAPEGTAFAPAHGSHIFQDLSRENSSRTDSHRN--QHKSQSWKSRLSFIRSNWKKS 646
            LP +  I P+      SF+TS+T      AP EYA+S+MSS  SLR K ++  +   D            SSP+  P   P+ +P D   H          A   +++ +D   + + AA   G YS+VL+ L+       V   AC FLE++CRD  LYFDFCEEGG+E++ISAVLLFGKID  LC +FF  ++ALS+H D+RVSHRLRGMGVPSV+ID+L  YRTD AIQ+AGCECL+L+ARS + SQTAIATLGGP +VYRAITQNN SF+DVKLARASL A+RYIA NNE+AA+YLV VAALDPV+SAAELF + GLEQDIL+A+EAFSFY NGRRSIIMSSGM AL+ IMLRNREPRFLVQCCNF+RA+ARWND ECESA+LQS ISER+V+LM  S +IVG EGARL WYACYACTFLASFG+R+RQRL RIGAIE  +DV +RRKD+AKVVHIATDALAELMKNEP +K  A+ + IV CL+EA  LH+   RV KA++WTL YL  P+G +  PA+GSH  +D+    ++R DS+RN   H +Q  K+ + F+R + KKS
Sbjct:  609 LPGDEAIEPA------SFSTSMTGQAPDGAPHEYATSTMSST-SLRRKCAKQAEDILD------------SSPQGVPGDLPSTEPADGTEHRTVHTPKRKSASMKKEMSEDQAAIALKAATTAGEYSMVLAILKRNRKFQGVVKNACIFLETICRDANLYFDFCEEGGVEEYISAVLLFGKIDMTLCEVFFRGMTALSTHADERVSHRLRGMGVPSVIIDILNCYRTDIAIQTAGCECLSLVARSGKLSQTAIATLGGPSVVYRAITQNNSSFKDVKLARASLNAIRYIAENNERAADYLVDVAALDPVASAAELFPDDGLEQDILNALEAFSFYTNGRRSIIMSSGMRALSAIMLRNREPRFLVQCCNFVRAVARWNDPECESAMLQSGISERIVSLMHQSQDIVGEEGARLSWYACYACTFLASFGARSRQRLRRIGAIETVLDVFRRRKDNAKVVHIATDALAELMKNEPESKMHAIRHNIVECLREAHDLHKDSIRVKKAIEWTLVYLNIPKGGSLGPAYGSHTHEDVMNR-TNRFDSYRNGKSHPAQKTKT-IRFLRFSRKKS 1155          
BLAST of Gvermi5415.t1 vs. uniprot
Match: A0A2V3IWA4_9FLOR (Putative serine/threonine-protein kinase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IWA4_9FLOR)

HSP 1 Score: 528 bits (1361), Expect = 6.560e-169
Identity = 259/433 (59.82%), Postives = 347/433 (80.14%), Query Frame = 0
Query:  184 DHSRQI-EKDALGVIAAAIADGHYSLVLSTLRTQHNSHAVAVVACTFLESVCRDKRLYFDFCEEGGIEQFISAVLLFGKIDAALCTIFFHAISALSSHHDDRVSHRLRGMGVPSVVIDMLAHYRTDTAIQSAGCECLALMARSSQQSQTAIATLGGPGIVYRAITQNNCSFRDVKLARASLRAVRYIAANNEKAAEYLVQVAALDPVSSAAELFTEAGLEQDILDAMEAFSFYANGRRSIIMSSGMNALATIMLRNREPRFLVQCCNFIRAIARWNDSECESAVLQSAISERVVALMEMSNNIVGMEGARLGWYACYACTFLASFGSRTRQRLLRIGAIEGAIDVLKRRKDDAKVVHIATDALAELMKNEPAAKNLAMDYKIVGCLKEALVLHRRMGRVAKALQWTLEYLAAPEGTAFAPAHGSHIFQDLSRE 615
            + +RQ+ E + L VI  A + G+YSL+L TL+    SH +A  AC++LE  CR + LY+D CEEGG+E+FISAV LFGK DAALCT+F ++++ALS+H DD+V H +RG+GVP +VI++L  ++TD  +Q+AGC CLA +A SS+ S++A+ATLGGPG VYRAIT+NN SF+DV+LA+ASL+AVR+IA +N KAAEYLV+VAALDPVS AA++FT+ GLEQDILDA++AFSFY  GRR+IIMSSG+ AL  IMLRN++PRFLVQCC FIRAIARW D ECE A+LQS+ISER+ +LM MSN+I G EGAR+ WYAC+ACTFLASFG+R+RQRL R+GAIE  ++V+ +RK++ +VVH ATDA+AEL+KNEP +  LA ++ ++  L+  L LH  + +V  AL WTL+Y+A+P+G    PA GSH +Q++ R+
Sbjct:  954 EEARQLSEHETLRVIDRAQSLGNYSLILETLKGHRTSHVIAKTACSYLEPFCRAEALYYDVCEEGGVEEFISAVSLFGKQDAALCTVFCNSMTALSTHFDDKVGHLIRGVGVPYMVIEVLELHKTDIPLQTAGCSCLAAIAGSSELSRSAVATLGGPGAVYRAITKNNSSFKDVELAKASLKAVRHIAHDNRKAAEYLVEVAALDPVSKAADVFTDHGLEQDILDALQAFSFYNCGRRNIIMSSGLKALTAIMLRNKDPRFLVQCCTFIRAIARWRDHECEDAMLQSSISERITSLMHMSNDIPGEEGARVAWYACHACTFLASFGARSRQRLRRVGAIETVLEVMAKRKENYRVVHNATDAIAELIKNEPESIALAEEHDVITLLQIMLELHHSVSQVRNALLWTLDYIASPKGRPIGPAEGSHAYQEMMRK 1386          
BLAST of Gvermi5415.t1 vs. uniprot
Match: R7QML1_CHOCR (Serine/threonine pseudokinase n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QML1_CHOCR)

HSP 1 Score: 420 bits (1080), Expect = 3.190e-132
Identity = 214/423 (50.59%), Postives = 293/423 (69.27%), Query Frame = 0
Query:  190 EKDALGVIAAAIADGHYSLVLSTLRTQHNSHAVAVVACTFLESVCRDKRLYFDFCEEGGIEQFISAVLLFGKIDAALCTIFFHAISALSSHHDDRVSHRLRGMGVPSVVIDMLAHYRTDTAIQSAGCECLALMARSSQQSQTAIATLGGPGIVYRAITQNNCSFRDVKLARASLRAVRYIAANNEKAAEYLVQVAALDPVSSAAELFTEAGLEQDILDAMEAFSFYANGRRSIIMSSGMNALATIMLRNREPRFLVQCCNFIRAIARWNDSECESAVLQSAISERVVALMEMSNNIVGMEGARLGWYACYACTFLASFGSRTRQRLLRIGAIEGAIDVLKRRKDDAKVVHIATDALAELMKNEPAAKNLAMDYKIVGCLKEALVLHRRMGRVAKALQWTLEYLAAPEGTAFAPAHGSHIFQDL 612
            E++A+  I  A   G  S +L T+R  + S  V  V    +   C+D+  YFD CEEGGIE  +S  + FG+ D  LC IF  +++ LS H++D+V HR+R  GVPS V++++  ++ D  +Q++GC+CLA +A +S+ S++A+ATLGGP  VYRA+T+NN SF++++LARASL AVR IA  NE+A+E+LVQV+ALD VS +A +FT+  LE DIL A+ AFSFY  GRR+I+MSSG+ ALA IMLRN +P FLV CC FIRAIA+W + ECE A+LQS I+ERV  LM+ SN   G  GA++ WYAC AC FLASFGS +R+RL ++GAIE  I +L +R+D+A+V   ATDALAEL+K EP  K  A     V  LK  L LH    +V  A+QWTL+ L++ +G   APA  S + ++L
Sbjct:  477 EQNAMHSIVRAHTVGDISSILQTMREHNCSPLVTRVGMAHILGHCKDELTYFDICEEGGIEVLLSGAVRFGEFDTELCVIFCDSMTILSEHYNDKVGHRIRATGVPSEVVELMNRHKIDVPVQTSGCKCLAAIAGASELSRSAVATLGGPAAVYRAMTKNNVSFKNIELARASLNAVRQIAQGNERASEFLVQVSALDAVSRSAAVFTDHSLEGDILSALRAFSFYTGGRRNIVMSSGLKALAEIMLRNDDPEFLVLCCQFIRAIAQWRNVECEEAMLQSCIAERVTTLMQNSNYWPGEPGAKVSWYACQACLFLASFGSLSRKRLRQVGAIETTISILNQRRDNARVARCATDALAELLKGEPEGKTYAERSHAVEALKATLDLHGNDVKVRSAVQWTLDCLSSTQGPISAPAQDSQMHEEL 899          
The following BLAST results are available for this feature:
BLAST of Gvermi5415.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3IW49_9FLOR8.850e-20259.51Protein kinase domain-containing protein n=1 Tax=G... [more]
A0A2V3IWA4_9FLOR6.560e-16959.82Putative serine/threonine-protein kinase n=1 Tax=G... [more]
R7QML1_CHOCR3.190e-13250.59Serine/threonine pseudokinase n=1 Tax=Chondrus cri... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 350..624
e-value: 2.5E-14
score: 54.9
coord: 183..349
e-value: 6.1E-7
score: 30.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 44..60
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 129..160
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 611..631
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 129..188
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..91
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 174..188
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 614..628
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 216..573

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24228contigScGOVlb_24228:1763363..1765303 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi5415.t1Gvermi5415.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24228 1763363..1765303 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi5415.t1 ID=Gvermi5415.t1|Name=Gvermi5415.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=647bp
MLDVPRAPLHPRVSPLTSPEQRSPSLRDASAALHHGLRAPPRVDAHADPP
PRPASPPLTFPDKTAAPAALARVPSASSSASASDHGVATLPAEHRITPST
VVDQLSFATSVTPSLLHAAPPEYASSSMSSAISLRHKSSQLLDTPADTQS
AQSPQHSVSSSPRRPPSPKPTPDPLDSKPHHDADHSRQIEKDALGVIAAA
IADGHYSLVLSTLRTQHNSHAVAVVACTFLESVCRDKRLYFDFCEEGGIE
QFISAVLLFGKIDAALCTIFFHAISALSSHHDDRVSHRLRGMGVPSVVID
MLAHYRTDTAIQSAGCECLALMARSSQQSQTAIATLGGPGIVYRAITQNN
CSFRDVKLARASLRAVRYIAANNEKAAEYLVQVAALDPVSSAAELFTEAG
LEQDILDAMEAFSFYANGRRSIIMSSGMNALATIMLRNREPRFLVQCCNF
IRAIARWNDSECESAVLQSAISERVVALMEMSNNIVGMEGARLGWYACYA
CTFLASFGSRTRQRLLRIGAIEGAIDVLKRRKDDAKVVHIATDALAELMK
NEPAAKNLAMDYKIVGCLKEALVLHRRMGRVAKALQWTLEYLAAPEGTAF
APAHGSHIFQDLSRENSSRTDSHRNQHKSQSWKSRLSFIRSNWKKS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like
IPR016024ARM-type_fold