Gvermi5369.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi5369.t1
Unique NameGvermi5369.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length149
Homology
BLAST of Gvermi5369.t1 vs. uniprot
Match: A0A2V3ITK4_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ITK4_9FLOR)

HSP 1 Score: 147 bits (371), Expect = 2.530e-41
Identity = 75/147 (51.02%), Postives = 96/147 (65.31%), Query Frame = 0
Query:    2 SLVSWVMKPLVSTAGMKEDTFNEAQVLKVLPQFLDCSNVKIWNSTTVNQGERKLVVDYIRTVGLVSSRFHAIVSDSPDGLLVYIDDEQCHTVCALEVKTMTALRTIESARNILLRYGAANFIREFGRSADAANVFHDLVPSTEYRLQ 148
            SL SWVMKPLVST GMKE + NE QVL  L  F D  NV+ W ST +     K   DYIRT+GL+SSR + ++SDSPD L+VY+D ++   VCA E+KTM  +RT E  R++   +G++  I   GRS DA  V   LV ST+YRL+
Sbjct:   88 SLNSWVMKPLVSTVGMKEGSLNEKQVLIELSTFFDSHNVQEWLSTKMKGDTFKYRADYIRTIGLISSRSYLMISDSPDALMVYLDKQEARHVCAFEIKTMNTVRTTEDTRDVSRTFGSSILISGVGRSVDAGLVLQQLVSSTDYRLE 234          
BLAST of Gvermi5369.t1 vs. uniprot
Match: R7QKF5_CHOCR (Uncharacterized protein n=2 Tax=Chondrus crispus TaxID=2769 RepID=R7QKF5_CHOCR)

HSP 1 Score: 116 bits (291), Expect = 1.940e-27
Identity = 63/154 (40.91%), Postives = 95/154 (61.69%), Query Frame = 0
Query:    2 SLVSWVMKPLVSTAGMKEDTFNEAQVLKVLPQFLDCSNVK------IWNSTTVNQGE-RKLVVDYIRTVGLVSSRFHAIVSDSPDGLLVYIDDEQCHTVCALEVKTMTALRTIESARNILLRYGAANFIREFGRSADAANVFHDLVPSTEYRLQ 148
            SL +WVMKPLVSTAGMKE + NE +VLK +P FL  +         ++N+      + RK+V+ +I +VGLV S+   +++DSPDG+L   ++ +   VCA E+KTMTAL T+  A ++  ++G    + + G    A  +F  L+PST+YR Q
Sbjct:  816 SLHAWVMKPLVSTAGMKEGSRNEIEVLKAIPSFLSKTRGAYARTRGVFNAVEYAHSDIRKIVIRHIPSVGLVESKSSTMIADSPDGILACKNEIEESFVCAAEIKTMTALTTVSEATHLREQFGPLTILSDVGSCGAADELFRTLIPSTQYRAQ 969          
BLAST of Gvermi5369.t1 vs. uniprot
Match: A0A2V3IP41_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IP41_9FLOR)

HSP 1 Score: 61.2 bits (147), Expect = 4.980e-9
Identity = 35/66 (53.03%), Postives = 39/66 (59.09%), Query Frame = 0
Query:    2 SLVSWVMKPLVSTAGMKEDTFNEAQVLKVLPQFLDCSNVKIWNSTTVNQGERKLVVDYIRTVGLVS 67
            SL SWVMKPLVST GMKE  FNE QVL+ LP   D  NV+ W ST +     K    Y  T  +VS
Sbjct:   88 SLDSWVMKPLVSTVGMKEGLFNEKQVLRELPTLFDSHNVQEWLSTKMKGDTHK----YRATTSVVS 149          
The following BLAST results are available for this feature:
BLAST of Gvermi5369.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3ITK4_9FLOR2.530e-4151.02Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QKF5_CHOCR1.940e-2740.91Uncharacterized protein n=2 Tax=Chondrus crispus T... [more]
A0A2V3IP41_9FLOR4.980e-953.03Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24228contigScGOVlb_24228:1453451..1453897 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi5369.t1Gvermi5369.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24228 1453451..1453897 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi5369.t1 ID=Gvermi5369.t1|Name=Gvermi5369.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=149bp
MSLVSWVMKPLVSTAGMKEDTFNEAQVLKVLPQFLDCSNVKIWNSTTVNQ
GERKLVVDYIRTVGLVSSRFHAIVSDSPDGLLVYIDDEQCHTVCALEVKT
MTALRTIESARNILLRYGAANFIREFGRSADAANVFHDLVPSTEYRLQ*
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