Gvermi5233.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gvermi5233.t1
Unique Name	Gvermi5233.t1
Type	polypeptide
Organism	Gracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length	274

Homology

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BLAST of Gvermi5233.t1 vs. uniprot
Match: A0A2V3J6K1_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6K1_9FLOR)

HSP 1 Score: 265 bits (677), Expect = 1.650e-85
Identity = 148/273 (54.21%), Postives = 193/273 (70.70%), Query Frame = 0

Query:    1 MTASAHAALDALHVALNSANTQVNHLSDRLQADLGPHSGALALLSSLRQLEKELPQLRQRMLDVYQRKAQVVALCNRQLQHCHEFASRIAPVVDPSLQLHRHTSQLVASFQATTDALSANIPPPCEDIDIGPDRIASWQPDPTEAPVAVQPPQNPTQKXXXXXXXXXXNVSPGTPSSQPGPDSAQSTSFKPIPKASYNRLPRNIKIRAGKLNDVNAFYQKVFTFLEAQDNVPVASKTLKAAMGEKTNDKFEVLRALAVLTATKKGWQLTYPKS 273
            MTASAHAALDALH+ALNSA+TQ+NHLS RLQ++LG H  AL+L++++R+LEK+LP LRQRML VY +KA +V+ C RQLQ C+ FASRIAPV+DP+L+   +T+ L+ +FQ  +D LS ++PP    +D+  DR  S Q D  ++ VA  P   P++                TP S P P++  S+ F PI KA+YNRLPRNIKIRAG+L  +NAFYQKVF F+ +Q N P + K L  A+ +++ DKFEVLRALAV T TKKGWQLT P S
Sbjct:    1 MTASAHAALDALHIALNSADTQLNHLSVRLQSELGHHDTALSLITAVRRLEKQLPALRQRMLTVYDQKAHLVSGCQRQLQECYSFASRIAPVIDPALKPTDYTADLITAFQNASDTLSHHLPPQPHHLDLNFDRHDSGQSD--QSNVATTPANQPSKPSSSSRAK--------TPPSVPKPNT--SSHFDPISKAAYNRLPRNIKIRAGRLPAINAFYQKVFDFMHSQKNSPQSDKKLMVALEQQSMDKFEVLRALAVFTCTKKGWQLTSPSS 261

The following BLAST results are available for this feature:

BLAST of Gvermi5233.t1 vs. uniprot

BLAST of Gvermi5233.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3J6K1_9FLOR	1.650e-85	54.21	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 40..67
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 121..196
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 169..193

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
ScGOVlb_24228	contig	ScGOVlb_24228:732164..732985 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gvermi5233.t1	Gvermi5233.t1	Gracilaria vermiculophylla HapMaleFtJ_2017 male	mRNA	ScGOVlb_24228 732164..732985 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gvermi5233.t1 ID=Gvermi5233.t1|Name=Gvermi5233.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=274bp
MTASAHAALDALHVALNSANTQVNHLSDRLQADLGPHSGALALLSSLRQL
EKELPQLRQRMLDVYQRKAQVVALCNRQLQHCHEFASRIAPVVDPSLQLH
RHTSQLVASFQATTDALSANIPPPCEDIDIGPDRIASWQPDPTEAPVAVQ
PPQNPTQKQNHKQKHNHKNVSPGTPSSQPGPDSAQSTSFKPIPKASYNRL
PRNIKIRAGKLNDVNAFYQKVFTFLEAQDNVPVASKTLKAAMGEKTNDKF
EVLRALAVLTATKKGWQLTYPKS*