Gvermi5211.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi5211.t1
Unique NameGvermi5211.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length153
Homology
BLAST of Gvermi5211.t1 vs. uniprot
Match: A0A2V3J758_9FLOR (Calmodulin, striated muscle n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J758_9FLOR)

HSP 1 Score: 209 bits (531), Expect = 6.200e-67
Identity = 105/152 (69.08%), Postives = 126/152 (82.89%), Query Frame = 0
Query:    1 MSSPFSTGKALTDDEENLRAIFDVFDPSGKGCVPVDRIGTIIRAAGEYPTEVTLNELINRYSMSSDTATFEQFVSAIAEVRRKHKKLSTSEVEAAFRIFDSSPYVTVDDLKKNLTQFGEKLSEEEIDQLVSLVGTTEDGRVDKKEMALRLTS 152
            MS+P    + ++ D ENLRAIF+VFDPS KGCVP DRIG IIRAAGEYPTE T NELI RY  + D   F+QF+SA+AEVR+KHKK S +E+EAAFR+F +SPY+TV +LKK LTQFGEKLS++EID+LV+LVGTTEDGR+DK EMA RLTS
Sbjct:    1 MSTP-KNAETVSHDGENLRAIFNVFDPSEKGCVPADRIGNIIRAAGEYPTEATANELIARYRAAGDEINFDQFLSAMAEVRQKHKKPSKTEIEAAFRVFGTSPYITVSELKKTLTQFGEKLSDDEIDRLVALVGTTEDGRIDKNEMANRLTS 151          
BLAST of Gvermi5211.t1 vs. uniprot
Match: A0A7L2GKX2_NYCGR (CALMS protein (Fragment) n=4 Tax=Neognathae TaxID=8825 RepID=A0A7L2GKX2_NYCGR)

HSP 1 Score: 85.9 bits (211), Expect = 1.770e-18
Identity = 44/133 (33.08%), Postives = 77/133 (57.89%), Query Frame = 0
Query:   22 FDVFDPSGKGCVPVDRIGTIIRAAGEYPTEVTLNELINRYSMS-SDTATFEQFVSAIAEVRRKHKKLSTSEVEAAFRIFDS--SPYVTVDDLKKNLTQFGEKLSEEEIDQLVSLVGTTEDGRVDKKEMALRLT 151
            F +FD  G GC+    +GT++R+ G+ PTE  L +++       S T  F +F+S +A  R+     S  E+  AFR+FD   + Y++V +L+  +T  GEKL++EE+D+++      +DG+V+ +E    +T
Sbjct:   17 FSLFDRDGDGCITTKELGTVMRSLGQNPTEAELQDMVGEVDADGSGTVDFPEFLSLMA--RKMRDTDSEEEIREAFRVFDKDGNGYISVAELRHVMTNLGEKLTDEEVDEMIKEADCNDDGQVNYEEFVRMMT 147          
BLAST of Gvermi5211.t1 vs. uniprot
Match: A0A087GRD5_ARAAL (Uncharacterized protein n=6 Tax=Pentapetalae TaxID=1437201 RepID=A0A087GRD5_ARAAL)

HSP 1 Score: 85.9 bits (211), Expect = 3.710e-18
Identity = 45/142 (31.69%), Postives = 81/142 (57.04%), Query Frame = 0
Query:    8 GKALTDDE-ENLRAIFDVFDPSGKGCVPVDRIGTIIRAAGEYPTEVTLNELINRYSMSSD-TATFEQFVSAIAEVRRKHKKLSTSEVEAAFRIFDSSP--YVTVDDLKKNLTQFGEKLSEEEIDQLVSLVGTTEDGRVDKKE 145
            G  LTDD+    +  F +FD  G GC+    +GT++R+ G+ PTE  L ++IN      + T  F +F++ +A  R+     S  E++ AFR+FD     +++  +L++ +T  GEKL++EE+D+++       DG+++  E
Sbjct:    2 GDQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNRTIDFPEFLTLMA--RKMQDTDSEEELKEAFRVFDKDQNGFISAAELRRVMTNIGEKLTDEEVDEMIREADVDGDGQINYPE 141          
BLAST of Gvermi5211.t1 vs. uniprot
Match: A0A8C3M4E1_CHRPC (Calmodulin like 3 n=4 Tax=Neognathae TaxID=8825 RepID=A0A8C3M4E1_CHRPC)

HSP 1 Score: 84.3 bits (207), Expect = 7.000e-18
Identity = 43/133 (32.33%), Postives = 76/133 (57.14%), Query Frame = 0
Query:   22 FDVFDPSGKGCVPVDRIGTIIRAAGEYPTEVTLNELINRYSMS-SDTATFEQFVSAIAEVRRKHKKLSTSEVEAAFRIFDS--SPYVTVDDLKKNLTQFGEKLSEEEIDQLVSLVGTTEDGRVDKKEMALRLT 151
            F +FD  G GC+    +GT++R+ G+ PTE  L +++    +  S T  F +F+S +A  R+     S  E+  AFR+FD   + Y++  +L+  +T  GEKL++EE+D+++       DG+V+ +E    +T
Sbjct:   17 FSLFDRDGDGCITTKELGTVMRSLGQNPTEAELQDMVGEVDVDGSGTIDFPEFLSLMA--RKMRDSDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIKEADCNNDGQVNYEEFVRMMT 147          
BLAST of Gvermi5211.t1 vs. uniprot
Match: A0A091SGZ9_PELCR (Calmodulin, striated muscle (Fragment) n=5 Tax=Neognathae TaxID=8825 RepID=A0A091SGZ9_PELCR)

HSP 1 Score: 83.2 bits (204), Expect = 1.310e-17
Identity = 43/133 (32.33%), Postives = 75/133 (56.39%), Query Frame = 0
Query:   22 FDVFDPSGKGCVPVDRIGTIIRAAGEYPTEVTLNELINRYSMS-SDTATFEQFVSAIAEVRRKHKKLSTSEVEAAFRIFDS--SPYVTVDDLKKNLTQFGEKLSEEEIDQLVSLVGTTEDGRVDKKEMALRLT 151
            F +FD  G GC+    +GT++R+ G+ PTE  L +++       S T  F +F+S +A  R+     S  E+  AFR+FD   + Y++  +L+  +T  GEKL++EE+D+++       DG+V+ +E    +T
Sbjct:    1 FSLFDRDGDGCITTKELGTVMRSLGQNPTEAELQDMVGEVDADGSGTIDFPEFLSLMA--RKMRDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIKEADCNNDGQVNYEEFVRMMT 131          
BLAST of Gvermi5211.t1 vs. uniprot
Match: Q6DN30_DAUCA (Calmodulin cam-206 n=1 Tax=Daucus carota TaxID=4039 RepID=Q6DN30_DAUCA)

HSP 1 Score: 83.2 bits (204), Expect = 1.960e-17
Identity = 44/139 (31.65%), Postives = 80/139 (57.55%), Query Frame = 0
Query:   11 LTDDE-ENLRAIFDVFDPSGKGCVPVDRIGTIIRAAGEYPTEVTLNELINRYSMSSD-TATFEQFVSAIAEVRRKHKKLSTSEVEAAFRIFDSSP--YVTVDDLKKNLTQFGEKLSEEEIDQLVSLVGTTEDGRVDKKE 145
            LTDD+    +  F +FD  G GC+    +GT++R+ G+ PTE  L ++IN      + T  F +F++ +A  R+     S  E++ AFR+FD     +++  +L+  +T  GEKL++EE+D+++       DG+++ +E
Sbjct:    5 LTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMA--RKMKDTDSGEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEE 141          
BLAST of Gvermi5211.t1 vs. uniprot
Match: A0A7I8VUE7_9ANNE (DgyrCDS6930 n=1 Tax=Dimorphilus gyrociliatus TaxID=2664684 RepID=A0A7I8VUE7_9ANNE)

HSP 1 Score: 82.8 bits (203), Expect = 2.640e-17
Identity = 43/144 (29.86%), Postives = 85/144 (59.03%), Query Frame = 0
Query:   10 ALTDD-EENLRAIFDVFDPSGKGCVPVDRIGTIIRAAGEYPTEVTLNELINRYSMSSDTATFEQFVSAIAEVRRKHKKLSTSEVEAAFRIFD--SSPYVTVDDLKKNLTQFGEKLSEEEIDQLVSLVGTTEDGRVDKKEMALRL 150
            AL++D ++ ++  F +FD  G+G +P+D++G ++RA  + PT+  + ELI  +  +    +   F S + ++ ++ K+ +  EV  AF +FD   + YV+  +++  +T  GEKL  +EI++L+S V    DG+++ K +   L
Sbjct:    2 ALSEDTQQEIKECFQLFDREGRGSIPIDQLGEMVRALRQCPTQKEVGELIREFCGNKGEFSLSTFTSIVTKLSQR-KRDTEDEVREAFSVFDRDGNGYVSAAEIRHVMTSLGEKLGHDEIEELLSEVNIDSDGQIEYKAVVRTL 144          
BLAST of Gvermi5211.t1 vs. uniprot
Match: B1NDI4_ACTCH (Calmodulin n=4 Tax=root TaxID=1 RepID=B1NDI4_ACTCH)

HSP 1 Score: 82.8 bits (203), Expect = 2.700e-17
Identity = 46/140 (32.86%), Postives = 81/140 (57.86%), Query Frame = 0
Query:   11 LTDDE-ENLRAIFDVFDPSGKGCVPVDRIGTIIRAAGEYPTEVTLNELINRYSMSSD-TATFEQFVSAIAEVRRKHKKLSTSE-VEAAFRIFDSSP--YVTVDDLKKNLTQFGEKLSEEEIDQLVSLVGTTEDGRVDKKE 145
            LTDD+    +  F +FD  G GC+    +GT++R+ G+ PTE  L ++IN      + T  F +F++ +A   RK K   + E ++ AFRIFD     +++  +L+  +T  GEKL++EE+D+++       DG+++ +E
Sbjct:    5 LTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMA---RKMKDTDSEEKLKEAFRIFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEE 141          
BLAST of Gvermi5211.t1 vs. uniprot
Match: CALMS_CHICK (Calmodulin, striated muscle n=213 Tax=Neognathae TaxID=8825 RepID=CALMS_CHICK)

HSP 1 Score: 82.8 bits (203), Expect = 2.770e-17
Identity = 43/133 (32.33%), Postives = 75/133 (56.39%), Query Frame = 0
Query:   22 FDVFDPSGKGCVPVDRIGTIIRAAGEYPTEVTLNELINRYSMS-SDTATFEQFVSAIAEVRRKHKKLSTSEVEAAFRIFDS--SPYVTVDDLKKNLTQFGEKLSEEEIDQLVSLVGTTEDGRVDKKEMALRLT 151
            F +FD  G GC+    +GT++R+ G+ PTE  L +++       S T  F +F+S +A  R+     S  E+  AFR+FD   + Y++  +L+  +T  GEKL++EE+D+++       DG+V+ +E    +T
Sbjct:   17 FSLFDRDGDGCITTMELGTVMRSLGQNPTEAELQDMVGEVDADGSGTIDFPEFLSLMA--RKMRDSDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIKEADCNNDGQVNYEEFVRMMT 147          
BLAST of Gvermi5211.t1 vs. uniprot
Match: K9P1P8_VACCO (Calmodulin-1 n=3 Tax=Mesangiospermae TaxID=1437183 RepID=K9P1P8_VACCO)

HSP 1 Score: 82.8 bits (203), Expect = 2.770e-17
Identity = 44/139 (31.65%), Postives = 80/139 (57.55%), Query Frame = 0
Query:   11 LTDDE-ENLRAIFDVFDPSGKGCVPVDRIGTIIRAAGEYPTEVTLNELINRYSMSSD-TATFEQFVSAIAEVRRKHKKLSTSEVEAAFRIFDSSP--YVTVDDLKKNLTQFGEKLSEEEIDQLVSLVGTTEDGRVDKKE 145
            LTDD+    +  F +FD  G GC+    +GT++R+ G+ PTE  L ++IN      + T  F +F++ +A  R+     S  E++ AFR+FD +   +++  +L+  +T  GEKL++EE+D+++       DG+++  E
Sbjct:    5 LTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMA--RKMKDTDSEEELKEAFRVFDKNQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYVE 141          
The following BLAST results are available for this feature:
BLAST of Gvermi5211.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J758_9FLOR6.200e-6769.08Calmodulin, striated muscle n=1 Tax=Gracilariopsis... [more]
A0A7L2GKX2_NYCGR1.770e-1833.08CALMS protein (Fragment) n=4 Tax=Neognathae TaxID=... [more]
A0A087GRD5_ARAAL3.710e-1831.69Uncharacterized protein n=6 Tax=Pentapetalae TaxID... [more]
A0A8C3M4E1_CHRPC7.000e-1832.33Calmodulin like 3 n=4 Tax=Neognathae TaxID=8825 Re... [more]
A0A091SGZ9_PELCR1.310e-1732.33Calmodulin, striated muscle (Fragment) n=5 Tax=Neo... [more]
Q6DN30_DAUCA1.960e-1731.65Calmodulin cam-206 n=1 Tax=Daucus carota TaxID=403... [more]
A0A7I8VUE7_9ANNE2.640e-1729.86DgyrCDS6930 n=1 Tax=Dimorphilus gyrociliatus TaxID... [more]
B1NDI4_ACTCH2.700e-1732.86Calmodulin n=4 Tax=root TaxID=1 RepID=B1NDI4_ACTCH[more]
CALMS_CHICK2.770e-1732.33Calmodulin, striated muscle n=213 Tax=Neognathae T... [more]
K9P1P8_VACCO2.770e-1731.65Calmodulin-1 n=3 Tax=Mesangiospermae TaxID=1437183... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 107..127
NoneNo IPR availableGENE3D1.10.238.10coord: 11..83
e-value: 1.7E-11
score: 46.2
NoneNo IPR availableGENE3D1.10.238.10coord: 84..152
e-value: 7.1E-10
score: 40.7
NoneNo IPR availablePANTHERPTHR23048:SF0FI08416P-RELATEDcoord: 14..148
NoneNo IPR availablePANTHERPTHR23048MYOSIN LIGHT CHAIN 1, 3coord: 14..148
IPR002048EF-hand domainPFAMPF13833EF-hand_8coord: 104..145
e-value: 6.4E-5
score: 22.7
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 13..48
score: 8.906429
IPR002048EF-hand domainCDDcd00051EFhcoord: 91..147
e-value: 6.78576E-9
score: 47.5425
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 14..147

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24228contigScGOVlb_24228:616497..617036 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi5211.t1Gvermi5211.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24228 616497..617036 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi5211.t1 ID=Gvermi5211.t1|Name=Gvermi5211.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=153bp
MSSPFSTGKALTDDEENLRAIFDVFDPSGKGCVPVDRIGTIIRAAGEYPT
EVTLNELINRYSMSSDTATFEQFVSAIAEVRRKHKKLSTSEVEAAFRIFD
SSPYVTVDDLKKNLTQFGEKLSEEEIDQLVSLVGTTEDGRVDKKEMALRL
TS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR011992EF-hand-dom_pair