Gvermi5200.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi5200.t1
Unique NameGvermi5200.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length388
Homology
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BLAST of Gvermi5200.t1 vs. uniprot
Match: A0A2V3J7G5_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J7G5_9FLOR)

HSP 1 Score: 312 bits (799), Expect = 1.920e-100
Identity = 165/289 (57.09%), Postives = 213/289 (73.70%), Query Frame = 0 
Query:    1 MVRYLKNWIEIISDQQALNRFVAVEILLARLHFPVSVCFAVGVLAQTGLVPYVAPYEWRLVFIASVFLTFTNGRDLNHCIRHFYHPQPTEQGALESVAIVARNDVPDAGAQMQMLGAFALTLGSVSLLNASIIALIRDNPISQVIGRRQYAASFALFLIGSGANGVLSNGAAPGLESFRIVICFQNLLAAATLCTASVLLLPEIGEEEKMNPFQTSLMTALSCIGSVMLVMSSLVNYFHTVGYCT--LHYEGYYNLLVEQQRAKVGTKNNRIAAWEKVKGLFWSRRDAW 287
            MVR+L++  EII ++++L+ FVA EI+LARLHFP++VCF++G+LAQTGLVPY AP+EW+ V IAS+FLT  NGRDLNHCIR  +  +P E+ A+ S+ +   ND   AG  MQ+L AFALTLGSVSLLNASII + RD+  S  I RRQ+A+SFALFLIGSGAN +  N  A  LE  RI++ FQN+LA+ATL  ASVL+LP IG E+  + FQ SL +ALS IGS++L+MSS+VNYF+TV YCT    Y   + L    ++A+VG K  R+  WE+VK LFWS R  W
Sbjct:    1 MVRFLRSCFEIIDNKKSLDWFVASEIMLARLHFPIAVCFSIGILAQTGLVPYAAPHEWKFVLIASLFLTLANGRDLNHCIRALFQTEPREEDAVTSLGLTTWNDSGSAGGHMQLLSAFALTLGSVSLLNASIIGIARDSEGSSNICRRQFASSFALFLIGSGANNIPVNKKAQRLECTRILVGFQNILASATLSVASVLMLPGIGGEKTTSSFQLSLTSALSGIGSILLIMSSIVNYFYTVAYCTRQCEYLESFCLAHAHEKAEVGAKRRRLMTWERVKSLFWSGRSNW 289
The following BLAST results are available for this feature:
BLAST of Gvermi5200.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J7G5_9FLOR1.920e-10057.09Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 298..387
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 354..387
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 325..353
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 307..324
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 114..136
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 168..178
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..20
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 239..387
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 179..201
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 137..147
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 213..238
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 202..212
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 148..167
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 46..113
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 21..45
NoneNo IPR availableTMHMMTMhelixcoord: 48..70
NoneNo IPR availableTMHMMTMhelixcoord: 217..239
NoneNo IPR availableTMHMMTMhelixcoord: 114..136
NoneNo IPR availableTMHMMTMhelixcoord: 151..173
NoneNo IPR availableTMHMMTMhelixcoord: 21..43
NoneNo IPR availableTMHMMTMhelixcoord: 180..202

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24228contigScGOVlb_24228:585183..586346 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi5200.t1Gvermi5200.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24228 585183..586346 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi5200.t1 ID=Gvermi5200.t1|Name=Gvermi5200.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=388bp
MVRYLKNWIEIISDQQALNRFVAVEILLARLHFPVSVCFAVGVLAQTGLV
PYVAPYEWRLVFIASVFLTFTNGRDLNHCIRHFYHPQPTEQGALESVAIV
ARNDVPDAGAQMQMLGAFALTLGSVSLLNASIIALIRDNPISQVIGRRQY
AASFALFLIGSGANGVLSNGAAPGLESFRIVICFQNLLAAATLCTASVLL
LPEIGEEEKMNPFQTSLMTALSCIGSVMLVMSSLVNYFHTVGYCTLHYEG
YYNLLVEQQRAKVGTKNNRIAAWEKVKGLFWSRRDAWWKRRKSRRRRLQH
AVRSSSPEPSTDEERQKNTESSEPESGDDSSPMTSDLSSSASFSTVYDEE
TGSRSSFVSDESEEEQAMKDRHRKRNRDRYSPREAES*
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