Gvermi5185.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male
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Overview
Homology
BLAST of Gvermi5185.t1 vs. uniprot
Match: A0A2V3J6V5_9FLOR (Transcription elongation factor TFIIS n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6V5_9FLOR) HSP 1 Score: 315 bits (806), Expect = 1.950e-106 Identity = 167/231 (72.29%), Postives = 189/231 (81.82%), Query Frame = 0
Query: 1 MADLNKKLSATKTIDKKARASTTPRKQIPAQGA-----DKPPS--SSPKSVDHAESSKEYNVKHPTGDKMRDKVRNLLSDALYIKDENFVKSKDEAQVVAHAIEQAMFLKFDGSGSAYKQKYRSLSFNFKDLKNGKLRSAVLSRHILPSELLDMSSTDLANDDLRKKRAQVREKMTRDAMPYTQQEASTDRFKCGKCRERKCTYYQMQTRSADEPLTTFVTCVNCNNRWRF 224
MAD+ KKLSATKTIDKK R TTP+ A D PS S P DH +Y+VKHPTGDKMRDKVR+LL+DAL+ KDE V SKD+AQ+VA+AIE AMF+KFDG+G +YKQKYRS+SFN KD KNGKLRS VL+R I P ELLDMSST+LAND+LRK+RA+V+EKMTRDAMPYTQQ ASTDRFKCGKC++RKCTYYQMQTRSADEPLTTFVTCVNCNNRWRF
Sbjct: 1 MADVKKKLSATKTIDKKTRPPTTPKILSSAXXXXXXPLDVSPSTVSVPPPPDH---DSQYDVKHPTGDKMRDKVRSLLADALFKKDEKHVSSKDDAQLVANAIEHAMFIKFDGNGQSYKQKYRSISFNLKDPKNGKLRSLVLTRQINPQELLDMSSTELANDELRKRRAEVQEKMTRDAMPYTQQAASTDRFKCGKCKQRKCTYYQMQTRSADEPLTTFVTCVNCNNRWRF 228
BLAST of Gvermi5185.t1 vs. uniprot
Match: R7QEZ4_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QEZ4_CHOCR) HSP 1 Score: 266 bits (680), Expect = 3.460e-87 Identity = 138/230 (60.00%), Postives = 178/230 (77.39%), Query Frame = 0
Query: 4 LNKKLSATKTIDKKARAS-TTPRKQIPAQGAD--------KPPSSSPKSVDHAESSKEYNVKHPTGDKMRDKVRNLLSDALYIKDENFVKSKDEAQVVAHAIEQAMFLKFDGSGSAYKQKYRSLSFNFKDLKNGKLRSAVLSRHILPSELLDMSSTDLANDDLRKKRAQVREKMTRDAMPYTQQEASTDRFKCGKCRERKCTYYQMQTRSADEPLTTFVTCVNCNNRWRF 224
L KKLSA+K I+KKAR+ +P A AD + S+ + +E EY+V HPT +K+RDK+R+LL+DAL+ KDE+FVK +++AQ+VA+AIE A++ K DG+G+ YK KYR++SFN KD KN KLR A+L RH+ PSELL+MS+ DLAND+LRK R +VR KMTRDAMP+++QEASTD FKCGKC++RKCTYYQMQTRSADEPLTTFV+CV+C NRWRF
Sbjct: 5 LEKKLSASKVINKKARSGDVSPHVSRDALKADAAAAATGERKDDSTQNETNSSEFDAEYDVPHPTNEKIRDKIRSLLTDALFKKDEDFVKDRNDAQIVANAIEAALYDKMDGNGAPYKNKYRNISFNIKDPKNAKLRMALLYRHLPPSELLNMSNHDLANDELRKNREEVRAKMTRDAMPFSKQEASTDMFKCGKCKQRKCTYYQMQTRSADEPLTTFVSCVHCGNRWRF 234
BLAST of Gvermi5185.t1 vs. uniprot
Match: A0A7S2ZFF0_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZFF0_9RHOD) HSP 1 Score: 162 bits (411), Expect = 7.440e-47 Identity = 80/165 (48.48%), Postives = 117/165 (70.91%), Query Frame = 0
Query: 61 DKMRDKVRNLLSDALYIKDENFVKSKDEAQVVAHAIEQAMFLKFDGSGSAYKQKYRSLSFNFKDLKNGKLRSAVLSRHILPSELLDMSSTDLANDDLRKKRAQVREKMTRDAMPY--TQQEASTDRFKCGKCRERKCTYYQMQTRSADEPLTTFVTCVNCNNRWR 223
D +R +V+ +L++ALY + E V+S ++A +A +E M+ F G+ AYK K+R+L+FN KD KN +LRS V+S + P L+ MSS +LAN + R+ ++ + R+A Y ++ A+TD FKCGKC++RKCTYYQ+QTRSADEPLT+FVTC+ CNNRW+
Sbjct: 39 DPVRKRVKEMLANALYKESEGHVESLEKAMEIAVKLELEMYTVFHGTNQAYKDKFRTLNFNLKDEKNERLRSLVVSGAVGPERLITMSSQELANPERRESNTKIEKNNMREAQLYNPSKHAATTDLFKCGKCKQRKCTYYQLQTRSADEPLTSFVTCMVCNNRWK 203
BLAST of Gvermi5185.t1 vs. uniprot
Match: C1NA42_MICPC (Transcription elongation factor n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1NA42_MICPC) HSP 1 Score: 166 bits (420), Expect = 9.490e-47 Identity = 85/167 (50.90%), Postives = 115/167 (68.86%), Query Frame = 0
Query: 60 GDKMRDKVRNLLSDALY--IKDENFVKSKDEAQVVAHAIEQAMFLKFDGSGSAYKQKYRSLSFNFKDLKNGKLRSAVLSRHILPSELLDMSSTDLANDDLRKKRAQVREKMTRDAMPYTQQEASTDRFKCGKCRERKCTYYQMQTRSADEPLTTFVTCVNCNNRWRF 224
GD +RD+ R LL++A+ I + S ++ A AIE AM ++ +G YK K+R LSFN KD KN LR +V I P+ LLD+S +L +D+ R A++RE T +A+ ++EASTD FKCGKC++RKCTYYQ+QTRSADEP+TTFVTCVNC+NRW+F
Sbjct: 158 GDPLRDRTRELLAEAIAQAIGAPDVYASVEDVAQTAIAIENAMHAQWSDTGKEYKAKFRQLSFNLKDPKNPDLRRSVADGLISPAVLLDLSPEELGSDERRNSNAKIREHATNEAVRGQKKEASTDAFKCGKCKQRKCTYYQLQTRSADEPMTTFVTCVNCDNRWKF 324
BLAST of Gvermi5185.t1 vs. uniprot
Match: A0A1X6P3X2_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P3X2_PORUM) HSP 1 Score: 157 bits (397), Expect = 2.770e-45 Identity = 82/162 (50.62%), Postives = 107/162 (66.05%), Query Frame = 0
Query: 63 MRDKVRNLLSDALYIKDENFVKSKDEAQVVAHAIEQAMFLKFDGS-GSAYKQKYRSLSFNFKDLKNGKLRSAVLSRHILPSELLDMSSTDLANDDLRKKRAQVREKMTRDAMPYTQQEASTDRFKCGKCRERKCTYYQMQTRSADEPLTTFVTCVNCNNRWR 223
MRDKVR+L++ ALY + V A+ A A+E AMF G AYK KYR LSFN KD KN LRS VL + P+ L+ MS+ +LAN++ + R +V E M R+A P A+TD F+CGKC++R+ TY+QMQTRSADEP+TTFV C+ C NRW+
Sbjct: 1 MRDKVRSLIASALYKDTDGLVADLAGAEPAAAAVEAAMFTATGTDVGGAYKSKYRQLSFNLKDAKNVALRSRVLRGDLTPAVLVGMSNEELANEETKAYRKEVAETMLREAQPGGNARATTDMFRCGKCKQRRTTYHQMQTRSADEPMTTFVCCLECGNRWK 162
BLAST of Gvermi5185.t1 vs. uniprot
Match: A0A7J7PD88_9CHLO (Transcription elongation factor n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7PD88_9CHLO) HSP 1 Score: 156 bits (394), Expect = 1.100e-43 Identity = 79/167 (47.31%), Postives = 113/167 (67.66%), Query Frame = 0
Query: 59 TGDKMRDKVRNLLSDALYIKDENFVKSKDEAQVVAHAIEQAMFLKFDG-SGSAYKQKYRSLSFNFKDLKNGKLRSAVLSRHILPSELLDMSSTDLANDDLRKKRAQVREKMTRDAMPYTQQEASTDRFKCGKCRERKCTYYQMQTRSADEPLTTFVTCVNCNNRWRF 224
TGD RD++R LL D L + ++ +D +V A +E A++ +F+ +G Y K RSLSFN KD N LR+ VL + P EL+DM +LA+D R++ ++R++ +A+ Q+ASTD FKCG+C+++KCTYYQMQTRSADEP+TTFVTCVNC +W+F
Sbjct: 87 TGDGKRDRIRQLLCDGLCLVPDDQRSGQDPGEVAAE-VEAAIYARFNQHTGPEYGAKVRSLSFNLKDPANPDLRARVLQGQVDPQELVDMPPEELASDSKRRENHKIRQEAAAEAVRGQTQQASTDMFKCGRCKQKKCTYYQMQTRSADEPMTTFVTCVNCGQKWKF 252
BLAST of Gvermi5185.t1 vs. uniprot
Match: A0A7S0RUH1_9CHLO (Transcription elongation factor n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0RUH1_9CHLO) HSP 1 Score: 157 bits (396), Expect = 1.830e-43 Identity = 87/173 (50.29%), Postives = 108/173 (62.43%), Query Frame = 0
Query: 55 VKHPTGDKMRDKVRNLLSDALYIKDENFVKSKD---EAQVVAHAIEQAMFLKFDGSGSAYKQKYRSLSFNFKDLKNGKLRSAVLSRHILPSELLDMSSTDLANDDLRKKRAQVREKMTRDAMPYTQQEASTDRFKCGKCRERKCTYYQMQTRSADEPLTTFVTCVNCNNRWRF 224
K TGD RDK+ L +AL + + D E +V +IE AMF KF G YK KYRS+SFN KD +N LR VLS I P LL +SS +L +D R+ +R+ M R+ ++STD+FKCGKC +RK YYQMQTRSADEP+TTFVTCVNCNNRW+F
Sbjct: 125 AKPNTGDPQRDKLAVSLCEALAVVLGEVGEDADGLAEPSLVGISIEAAMFRKFGGMTKEYKAKYRSISFNLKDSRNPDLRRKVLSGDISPYTLLTLSSEELGSDSKREANEAIRQHMMRECERGQTTQSSTDQFKCGKCGQRKTIYYQMQTRSADEPMTTFVTCVNCNNRWKF 297
BLAST of Gvermi5185.t1 vs. uniprot
Match: A0A834Z4H7_9MAGN (Transcription elongation factor n=1 Tax=Tetracentron sinense TaxID=13715 RepID=A0A834Z4H7_9MAGN) HSP 1 Score: 158 bits (399), Expect = 5.070e-43 Identity = 85/170 (50.00%), Postives = 110/170 (64.71%), Query Frame = 0
Query: 61 DKMRDKVRNLLSDALY-IKDENFVKSKDEAQV-----VAHAIEQAMFLKFDGSGSAYKQKYRSLSFNFKDLKNGKLRSAVLSRHILPSELLDMSSTDLANDDLRKKRAQVREKMTRDAMPYTQQEASTDRFKCGKCRERKCTYYQMQTRSADEPLTTFVTCVNCNNRWRF 224
D MRDKVR LLS+A + E +DEA VA +E AMF K+ S A K KYRS+ FN KD N LR VL H+ P LL M+ ++A+D +++ Q++EK D Q +A+TD+F+CG+C +RKCTYYQMQTRSADEP+TT+VTCVNCNN W+F
Sbjct: 215 DAMRDKVRELLSEAFSKVSSEADEDIRDEANACDPIRVAVTVESAMFEKWGRSNGAQKFKYRSIMFNIKDPNNPDLRRKVLLGHVKPERLLSMTPDEMASDQRQRENNQIKEKALFDCERGGQAKATTDQFRCGRCGQRKCTYYQMQTRSADEPMTTYVTCVNCNNHWKF 384
BLAST of Gvermi5185.t1 vs. uniprot
Match: A0A2P6TNC7_CHLSO (Transcription elongation factor n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TNC7_CHLSO) HSP 1 Score: 153 bits (386), Expect = 1.240e-41 Identity = 80/166 (48.19%), Postives = 109/166 (65.66%), Query Frame = 0
Query: 59 TGDKMRDKVRNLLSDALYIKDENFVKSKDEAQVVAHAIEQAMFLKFDGSGSAYKQKYRSLSFNFKDLKNGKLRSAVLSRHILPSELLDMSSTDLANDDLRKKRAQVREKMTRDAMPYTQQEASTDRFKCGKCRERKCTYYQMQTRSADEPLTTFVTCVNCNNRWRF 224
TGD +RDK R L+ A + V + V A+E ++ + G AYK K+R L FN KD N LR VLS I P L ++ +LA+D R++ A++REK DA P + ++A+TD+F+CGKC++RKCTYYQMQTRSADEP+TTFV+C+NCNNRW+F
Sbjct: 166 TGDSIRDKCRQNLAQAFHQAVLEGVAG--DPLVCGVAVENEIYNQNGGVSQAYKAKFRQLHFNLKDAANPDLRRKVLSGEIAPDVLHNLPPEELASDAKREENARIREKKLFDAAPSSAKQATTDQFQCGKCKQRKCTYYQMQTRSADEPMTTFVSCMNCNNRWKF 329
BLAST of Gvermi5185.t1 vs. uniprot
Match: A0A087SIQ6_AUXPR (Transcription elongation factor A protein 2 n=1 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A087SIQ6_AUXPR) HSP 1 Score: 151 bits (381), Expect = 1.850e-41 Identity = 83/173 (47.98%), Postives = 111/173 (64.16%), Query Frame = 0
Query: 59 TGDKMRDKVRNLLSDALYIKDENF--VKSKDEAQ-----VVAHAIEQAMFLKFDGSGSAYKQKYRSLSFNFKDLKNGKLRSAVLSRHILPSELLDMSSTDLANDDLRKKRAQVREKMTRDAMPYTQQEASTDRFKCGKCRERKCTYYQMQTRSADEPLTTFVTCVNCNNRWRF 224
TGDK+RD R + AL + E S DE +A A+E+ + + G YK K+RSLSFN KD KN LR VL+ I P L+ ++ LA+D R++ A++REK D+ P ++ +TD+F+CGKCR+RK TYYQMQTRSADEP+TTFVTC+NCNNRW+F
Sbjct: 104 TGDKVRDLCRTTFAAALCLAVEELRAAPSPDEEACATPGALAVAMEEELRRQHGGVTEGYKAKFRSLSFNLKDRKNPDLRRKVLTGRIAPDLLVTLAPEALASDAQREENARIREKKLFDSAPSAAKQPTTDQFQCGKCRQRKTTYYQMQTRSADEPMTTFVTCLNCNNRWKF 276 The following BLAST results are available for this feature:
BLAST of Gvermi5185.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gvermi5185.t1 ID=Gvermi5185.t1|Name=Gvermi5185.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=225bpback to top |