Gvermi5173.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi5173.t1
Unique NameGvermi5173.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length286
Homology
BLAST of Gvermi5173.t1 vs. uniprot
Match: A0A2V3J6U3_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6U3_9FLOR)

HSP 1 Score: 421 bits (1083), Expect = 1.050e-146
Identity = 200/275 (72.73%), Postives = 231/275 (84.00%), Query Frame = 0
Query:   10 YYTTRLALTVTALVLFPLTLLISRTTPTRLNACYIRRELESPPPPLIPLRDGALHNYSVYIMWTAMFLLALMPHARAAALFSLTFASIWFHVTYIYLAAFKAPLADFNCAGRHQEYPNGISGHYCYFIFVAFTASRYARRRLKANPNASPLLKAVAAFLLILFGIGGVATLYRTFFHGYHSARQISFGASLGILSHCALDAVLFQDGKGFSTDVRLTILLANSITSLTMYYRLWPHMSAGPAISLNHLIFHLSLWTILLICAHFVISEERKSTKE 284
            Y TTR  L + A+ L PLT+ + R +P RLNACYIRREL+SPPPPLIPLRD  LHNYSVYIMWTAMFLLAL+PHAR  ALFSLT+AS+WFH TYIYLAAFKAPL DFNCAGRH+ YPNGISGHYCYFIFVAFTA+RYAR RLK+NPNASP +KA AA L+ LFG+GGVATLYRTFFHGYHSARQIS+GASLGI +HC LD +LFQ+  GF+T +RL  LLANS TSLT+Y+RLWPH +AGPAIS  +L+FH SLW ILL+C +++ + E    KE
Sbjct:    9 YNTTRNFLALAAVTLLPLTIFLERASPARLNACYIRRELQSPPPPLIPLRDSVLHNYSVYIMWTAMFLLALLPHARPKALFSLTYASLWFHATYIYLAAFKAPLQDFNCAGRHKSYPNGISGHYCYFIFVAFTAARYARSRLKSNPNASPGIKAAAAALMSLFGVGGVATLYRTFFHGYHSARQISYGASLGIFAHCVLDYILFQEDSGFTTYLRLLFLLANSTTSLTLYFRLWPHEAAGPAISFGNLVFHASLWVILLVCTYYLRAAEENPAKE 283          
BLAST of Gvermi5173.t1 vs. uniprot
Match: R7QBL7_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QBL7_CHOCR)

HSP 1 Score: 314 bits (804), Expect = 2.650e-104
Identity = 160/269 (59.48%), Postives = 190/269 (70.63%), Query Frame = 0
Query:   14 RLALTVTALVLFPLTLLISR--TTPTRLNACYIRRELESPPPPLIPLRDGALHNYSVYIMWTAMFLLALMPHARAAALFSLTFASIWFHVTYIYLAAFKAPLADFNCAGRHQEYPNGISGHYCYFIFVAFTASRYARRRLKANPNASPLLKAVAAFLLILFGIGGVATLYRTFFHGYHSARQISFGASLGILSHCALDAVLFQDGKGFSTDVRLTILLANSITSLTMYYRLWPHMSAGPAISLNHLIFHLSLWTILLICAHFVISEERK 280
            RLAL    L+L  LTL + R  T  T L+ CYIRRELE P P  IP+RDG LHNYSV +MW +MFLLAL+P+ R  A++ LT+ SIWFH+TYI LAA KAPL DF CAGRHQ +PNGISGHYCYFIFVA T  R+AR RL+ NPN S L  A  A LL LF +GG ATLYRTFFHGYHS RQI+ GA+LGI SH  LD   F+D       V L++L A+S+ +LT YY LWPH+ AG AI+  HL FH +LW +LL  A+   S +RK
Sbjct:   11 RLALATVPLLLVLLTLALDRHPTMGTNLDTCYIRRELEKPAPTFIPMRDGPLHNYSVLVMWISMFLLALLPNGRLKAVYLLTYTSIWFHITYILLAALKAPLYDFACAGRHQFFPNGISGHYCYFIFVALTTPRFARTRLRLNPNTSRLYLAPIALLLTLFTVGGTATLYRTFFHGYHSPRQIALGAALGIFSHSVLDFFQFEDDAEPPITVSLSVLFASSLNALTSYYFLWPHVIAGAAITAGHLRFHAALWLVLLAAAYLRQSADRK 279          
BLAST of Gvermi5173.t1 vs. uniprot
Match: A0A1X6PD70_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PD70_PORUM)

HSP 1 Score: 144 bits (362), Expect = 1.970e-37
Identity = 97/267 (36.33%), Postives = 133/267 (49.81%), Query Frame = 0
Query:   37 TRLNACYIRRELESP---PPPL-IPLRDGALHNYSVYIMWTAMFLLAL-MPHARAAALFSLTFASIWFHVTYIYLAAFKAPLADFNC-AGRHQEYPNGISGHYCYFIFVAFTASRYARRRLKANPNASPLLKA-----------------------------VAAFLLILFGIGGVATLYRTFFHGYHSARQISFGASLGILSHCALDAVLFQDGKGFSTDVRLTILLANSITSLTMYYRLWPHMSAGP-AISLNHLIFHLSLWTIL 267
            T L+AC I R+ E P   P PL +PL D ALH+ SV  +W    L A+ +P  R  A+  +   ++WF  TY    A K  L D  C + R   YPNG+SGH+CYF FVA   + Y   RL A+  A+P L                                AA LL LF IGGVATL RT+ HGYHS +Q+  GA+ GI S+ A+DA+ F         V+L ++ A    +L+ Y   WP   AG  A++   L+ + + W ++
Sbjct:   21 TTLHACVINRQAEGPRRPPSPLSLPLGDSALHDASVTTVWAYGLLTAVGLPVERPKAVLDIALTTLWFQATYWAADAAKGALGDDRCTSARRATYPNGVSGHFCYFTFVALAVAVYTADRL-ADVAATPALSTRRPVTTGAAPGSDAAVMAGVPQALLGVVTAAAGLLGLFTIGGVATLVRTYAHGYHSGQQVLLGAAAGIASYLAVDALHFCGATAPHLGVQLAVVAAAGGGALSAYAAAWPSAVAGEEAVTGRQLVGYAAAWLVV 286          
BLAST of Gvermi5173.t1 vs. uniprot
Match: M2WV89_GALSU (Uncharacterized protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2WV89_GALSU)

HSP 1 Score: 140 bits (353), Expect = 4.760e-36
Identity = 85/249 (34.14%), Postives = 128/249 (51.41%), Query Frame = 0
Query:   39 LNACYIRRELESPPPP---LIPLRDGALHNYSVYIMWTAMFLLALMPHARAAALFSLTFASIWFHVTYIYLAAFKAPLADFNCA-GRHQEYPNGISGHYCYFIF--VAFTASRYARRRLKANPNASPLLKA---------VAAFLLILFGIGGVATLYRTFFHGYHSARQISFGASLGILSHCALDAVLFQ---DGKGFSTDVRLTILLANSITSLTMYYRLWPHMSAGPAISLNHLIFHLSLWTILLI 269
            L+ C + R +E  PP    +IP+RD  LHN++V  +W  + L       + AA+F ++F S+WFH+TY +L   K  L D  C+ GR    PN ISGHYCYF F  ++ T+    ++    +      LKA         ++   L  F IG + T+YRTFFHGYHS RQI +G  LG LSH  ++ VL++    G+     + +  LL+ ++      +  WP    G  +    ++ H+  W IL I
Sbjct:   35 LDLCVVDRAVEKLPPVNSFVIPIRDSLLHNFTVATLWMLLVLFIFTSPKKGAAIFLVSFVSLWFHLTYWFLLLVKGWLDDATCSFGRFIGQPNSISGHYCYFTFCFLSLTSLFQVKQLYWRDSRRGKQLKATLLWILENYISKLFLYTFIIGSIVTVYRTFFHGYHSLRQILYGLGLGCLSHALMETVLWEYFIAGRHVLLILGILALLSPNLLFFCTLF--WPFPVYGYPVGSKQVMGHIINWLILFI 281          
BLAST of Gvermi5173.t1 vs. uniprot
Match: A0A5J4YPC0_PORPP (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YPC0_PORPP)

HSP 1 Score: 116 bits (291), Expect = 6.840e-27
Identity = 84/246 (34.15%), Postives = 119/246 (48.37%), Query Frame = 0
Query:   46 RELESPPPPLIPLRDGALHNYSVYIMWTAMFLLALMP-------HARAAALFSLTFASIWFHVTYIYLAAFKAPLADFNC-AGRHQEYPNGISGHYCYFIFVAF-----------TASRYARRRLKANPNASPLLKAVAAFLLILFGIGGVATLYRTFFHGYHSARQISFGASLGILSHCALDAVLFQDGKGFSTDVRLTILLANSITSLTMYYRLWPHMSA-GPAISLNHLIFHLSLWTILLICA 271
            R LES P       D  L++ +V  MW     +A M        H R A  F L FA +WFH +Y +L   KA L D NC + R   YPNG+SGHY YF F +            T+ R+ RR+   N   +    A+    ++ + +    TLYRT+ HGYHSARQ+  G +  ILSH +L  +L  D    +   +  IL   +          WP  +A GPAI    L+  +S+W+I+++CA
Sbjct:   94 RALESVP-------DNVLNHVAVACMWLTALGIACMASVRSRPAHRRWAPWFELAFAVLWFHASYWFLYVAKAWLGDVNCNSARAPFYPNGVSGHYAYFGFCSLGLPVFFAAHLQTSQRHERRQ---NEKTNAFFSALYLVAMV-YALTSSITLYRTYAHGYHSARQVLLGVATAILSHVSLLEMLGSDTV--APLHKCAILALFTACGFMGTRSTWPVEAARGPAIGNVQLLVQVSMWSIVILCA 326          
BLAST of Gvermi5173.t1 vs. uniprot
Match: A0A7S4LDF1_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4LDF1_9EUGL)

HSP 1 Score: 60.8 bits (146), Expect = 4.120e-7
Identity = 49/180 (27.22%), Postives = 83/180 (46.11%), Query Frame = 0
Query:   42 CYIRRELESPPPPLIPLRDGALHNYSVYI-------MWTAMF-------LLALMPHARAAALFSLTFASIWFHVTYIYLAAFKAPLADFNCAGRHQEYPNGISGHYCYFIFVAFTAS--RYARRRLKANPNASPLLKAVAAFLLILFGIGGVATLYRTFFHGYHSARQISFGASLGILSH 205
            CY  R  E  PP   P     LH   V++       +W A+F       +  L+     A +  ++   +W+  +   +   K  + D +C+     +PN ISGH  +F+FV  +    RY   RL ++       K     L+++     +  L+RT+F+GYHS RQI +GA+ G+++H
Sbjct:   46 CYHDRFAE--PPTHQPSATLLLHITEVFVIICLGASLWDAIFESLKAWSIRPLLSAVDFAEMLDISSTILWYFGSLAIVKTVKYLVKDHSCS----THPNSISGHNNFFMFVILSLPILRYGPPRLTSSRQQDWKWKISYISLVVV----ALWQLHRTYFYGYHSLRQIVYGAAFGVVNH 215          
The following BLAST results are available for this feature:
BLAST of Gvermi5173.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A2V3J6U3_9FLOR1.050e-14672.73Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QBL7_CHOCR2.650e-10459.48Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A1X6PD70_PORUM1.970e-3736.33Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
M2WV89_GALSU4.760e-3634.14Uncharacterized protein n=1 Tax=Galdieria sulphura... [more]
A0A5J4YPC0_PORPP6.840e-2734.15Uncharacterized protein n=1 Tax=Porphyridium purpu... [more]
A0A7S4LDF1_9EUGL4.120e-727.22Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..31
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 87..109
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 148..158
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 63..80
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 129..147
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 159..181
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 276..285
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 225..242
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 214..224
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 110..128
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 254..275
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 243..253
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 81..86
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 32..62
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 193..213
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 182..192
NoneNo IPR availableTMHMMTMhelixcoord: 257..276
NoneNo IPR availableTMHMMTMhelixcoord: 61..80
NoneNo IPR availableTMHMMTMhelixcoord: 159..181
NoneNo IPR availableTMHMMTMhelixcoord: 191..213
NoneNo IPR availableTMHMMTMhelixcoord: 129..147
NoneNo IPR availableTMHMMTMhelixcoord: 225..242
NoneNo IPR availableTMHMMTMhelixcoord: 87..109
NoneNo IPR availableTMHMMTMhelixcoord: 13..35

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24228contigScGOVlb_24228:509712..510569 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi5173.t1Gvermi5173.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24228 509712..510569 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi5173.t1 ID=Gvermi5173.t1|Name=Gvermi5173.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=286bp
MPNTATTYPYYTTRLALTVTALVLFPLTLLISRTTPTRLNACYIRRELES
PPPPLIPLRDGALHNYSVYIMWTAMFLLALMPHARAAALFSLTFASIWFH
VTYIYLAAFKAPLADFNCAGRHQEYPNGISGHYCYFIFVAFTASRYARRR
LKANPNASPLLKAVAAFLLILFGIGGVATLYRTFFHGYHSARQISFGASL
GILSHCALDAVLFQDGKGFSTDVRLTILLANSITSLTMYYRLWPHMSAGP
AISLNHLIFHLSLWTILLICAHFVISEERKSTKEE*
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