Gvermi5165.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi5165.t1
Unique NameGvermi5165.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length535
Homology
BLAST of Gvermi5165.t1 vs. uniprot
Match: A0A2V3J6Y3_9FLOR (SART-1 family protein DOT2 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6Y3_9FLOR)

HSP 1 Score: 387 bits (994), Expect = 1.190e-125
Identity = 284/540 (52.59%), Postives = 363/540 (67.22%), Query Frame = 0
Query:    6 KPKPSKNVAGELVYSTEDTNRVRVALGLRPLSTADTEKPSLPAF-QTISKNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSASDAKRHQSTEDGHALKRRLQKARAARAARTVMAPLSISEELTKLEPKGTSLPAKEEVVPVTVKKRKRDDRDTVQLPTHLENELGLGQHAELTLRDKHVLD-DDGSQPFHRADQSRKHDGDSNKDSDQSEIDGMNYDGTDTVQFRQEPQQP---KNATSHNIERSDMIVDDDFDKRPAFSKR--KRNXXXXXXVAEEEQVTKGHLKALRLKEEQKNGDESENDDEYYQKMDAARRKAKREDRDRIAKQILERVNH--SDSEKEEDALVAFSEMEKISVDVPITDRDEKEKLFTSAPQSSAGASRETVVQSPIKTVNAVKTENLTNSSTKNF-----TEITSKPALAGSGSVPTAEEV-HPSETNGLTGLAATLKRLRQTGVLHRKPEQVGRARDERFNDSDEESAEHGKTRVKLSYTDEFGNKLTPKEAYRLLSHKFHGNAPKQNKREKRLQKVLEKK 530
            +PKPSKN AGEL +STEDTNR+R+ALGLRPL       PS PA  +TI+KN XXXXXXXXXXXXXXXXXXXXXX       S   A    ST D +AL+RRLQ+ARAARA R V+APLSI+E +   E K   L + +  +    KKRKR    +V+LP  +E+EL  G+   LTLRDK VL+  +G        Q R  D  S  D  Q +I+GM YDGTDT QFRQ+ QQP   K+A   +IER D+I++DDFDK+P FSKR  KR       VAEEE V+KGHLKALR K EQK  + S+ DDEYY++M  ARRK  R D++R A++IL  +N   SD++ + +A V ++ M++  VDVP   +   + +  S  +  AG S +    S +   +  K + + ++  K+      +E T   A+  +  VPTAEE+  PSETNG+TGLAATLKRLRQTGVL+R+P Q+GRARD+ ++DSD++SA  GK RVKL+Y DE+GNKLTPKEAYRLLSH+FHGNAP+QNKREKRLQK+LE K
Sbjct:    6 RPKPSKNSAGELTFSTEDTNRLRLALGLRPLRPTSAS-PSKPAHAKTITKNXXXXXXXXXXXXXXXXXXXXXXXTEQTPHTSEPAASHSVSTGDSNALQRRLQQARAARAVRNVIAPLSIAEAVRD-EEKQRELHSNQPSL--QTKKRKRQTSGSVELPERVEDELAPGEQMILTLRDKPVLEVKEGPDVLQHPAQERTEDISSQVDGAQRDINGMEYDGTDTAQFRQQ-QQPTDLKDAIKLSIERKDIIIEDDFDKKPTFSKRPRKREKKRRKRVAEEEPVSKGHLKALREKAEQKLKEHSDTDDEYYERMATARRKQNRADKERAAQRILHEINRFQSDNDDQNNAAVVYTAMDQFLVDVPA--QTHADDIDPSPQKDQAGKSGKK--PSDLNHGDEHKPDEVESTEDKDAPISKRSEETKISAVESA--VPTAEEIKQPSETNGMTGLAATLKRLRQTGVLNRRPTQMGRARDQWYDDSDDDSANDGKPRVKLAYVDEYGNKLTPKEAYRLLSHRFHGNAPRQNKREKRLQKILEAK 534          
BLAST of Gvermi5165.t1 vs. uniprot
Match: R7QQK6_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QQK6_CHOCR)

HSP 1 Score: 122 bits (306), Expect = 9.890e-26
Identity = 179/591 (30.29%), Postives = 257/591 (43.49%), Query Frame = 0
Query:   10 SKNVAGELVYSTEDTNRVRVALGLRPLSTADTEKPSLPAFQTISKNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSASDAKRHQSTEDGHALKRRLQKARAARAARTVMAPLSISEEL-TKLEPKGTSLPAKEEVVPVTVKKRKRDDRDTVQLPTHLENELGLGQHAE---LTLRDKHVLDDDGSQPFHRADQSRKHDGDSNKDSD--------------QSEIDGMNYDGTDTVQFRQEPQQPKNATSHNIE-RSDMIVDDDF------DKRPAFSKRKRNXXXXXX-----VAEEEQVTKGHLKALRLKEEQKNG----------------DESENDDEYYQKMDAARRKAKREDRDRIAKQILERVNHSDS----EKEEDALVA-------FSEMEKISVDVPITDRDEKEKL-------FTSAPQ----SSAG---ASRETVVQSPIKTVNAVKTENLTNSSTKNFTEITSKPALAGSGSVPTAEEVHPSETNGLTGLAATLKRLRQTGVLHRKPEQVGRARDERFNDSD-EESAEHGKTRVKLSYTDEFGNKLTPKEAYRLLSHKFHGNAPKQNKREKRLQKVLE 528
            SKN  GE+  S E+TNRVR ALGLRPL T  +     P      K                XXXXXXXXX       A +A   + ++D                A  +MA ++ S +    +E KG S  +  E      +K  R       + +H       G  A+   LTL D  +L ++            K DGDS+   D                EI G  YDGTDT +F        N  + +IE  +  +V+ D+      D   A  K +++           V+E EQ   G  + +    + K G                D+S++DD +Y  +  A R+AK ++       ILE ++ +++    E  E A  A       ++EME+    +P        K+       +++ P+    + AG    +RET  + P K +     EN  + S +   E             P      PS  NGL   AATL+RLR  G L  KP Q+GRARD+RF++S   E+ E+G+  +KLSYTDE+GN+LT KEA+R+L HKFHG  P QNKREKRL+K+LE
Sbjct:   71 SKN--GEITCSVEETNRVRAALGLRPLRTEISAAKEEPVED---KQSSRKAQALKERLERAXXXXXXXXXAVGVRSIAEEALLEEDSDD-------------VDEASGLMAWVARSRQKEASVESKGKSKASPRE------RKAARAVNKASAI-SHSAKPAIQGSPAQGEILTLADAPILPEN------------KTDGDSDPAEDALVNPLKVVKKRPRSPEICGATYDGTDTKEFS--AGMKINPGTISIEPTASPVVESDYKGGRKADNDTAVRKHRKHEQSKRGKKRRRVSEVEQDGHGEPQRMSADPQVKKGRMEEIRKAANSAANMYDDSDDDDPFYTNLAKATRRAKNKEIKSSVDTILEAIDRANAAVVIEGNEAAAAAHDAERSVYNEMEQFLQKIPTAQGSSDGKVNGKGDGEYSTPPEGKKENGAGLQKTARETE-EPPGKVIKQAANENSASGSVREAEEAQDVELSLQPIVEPVGLAASPSADNGL---AATLRRLRAMGELKHKPNQMGRARDKRFDESTGTETRENGRREIKLSYTDEYGNELTRKEAFRMLCHKFHGKGPGQNKREKRLRKMLE 618          
BLAST of Gvermi5165.t1 vs. uniprot
Match: K3X7K3_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X7K3_GLOUD)

HSP 1 Score: 74.7 bits (182), Expect = 8.880e-12
Identity = 48/92 (52.17%), Postives = 61/92 (66.30%), Query Frame = 0
Query:  439 TGLAATLKRLRQTGVLH--RKPEQVGRARDERFNDSDEESAEHGKTRVKLSYTDEFGNKLTPKEAYRLLSHKFHGNAPKQNKREKRLQKVLE 528
            +G+AATL  LR+TG L   R   Q GRA D R  + DEE     K  VKL Y DEFG  LT KEA+R+LS+KFHG+ P + K+EKRL+++ E
Sbjct:   72 SGMAATLALLRKTGDLRETRVERQAGRANDARDRNVDEEL--RIKDGVKLDYRDEFGRLLTKKEAFRMLSYKFHGHEPGKKKKEKRLKQLKE 161          
BLAST of Gvermi5165.t1 vs. uniprot
Match: A0A7S1EUI3_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1EUI3_9RHOD)

HSP 1 Score: 79.0 bits (193), Expect = 9.500e-12
Identity = 48/94 (51.06%), Postives = 61/94 (64.89%), Query Frame = 0
Query:  439 TGLAATLKRLRQTGVLHRKPE---QVGRARDERFNDSDEESAEH-GKTRVKLSYTDEFGNKLTPKEAYRLLSHKFHGNAPKQNKREKRLQKVLE 528
            +GLAA L   R+ G L  K +   Q GRA D+ F+ +D    E   K  ++L Y DEFG KLTPKEA+R LS+KFHG  P +NK+EKRLQ+ LE
Sbjct:  478 SGLAAALNHFREQGELVSKGKGVKQYGRATDKSFSFADAGDGEEVKKDSIRLEYVDEFGRKLTPKEAFRHLSYKFHGKPPSKNKQEKRLQRYLE 571          
BLAST of Gvermi5165.t1 vs. uniprot
Match: UPI0010A48F3F (SART-1 family protein DOT2-like n=1 Tax=Prosopis alba TaxID=207710 RepID=UPI0010A48F3F)

HSP 1 Score: 73.6 bits (179), Expect = 5.500e-10
Identity = 47/111 (42.34%), Postives = 62/111 (55.86%), Query Frame = 0
Query:  428 EEVHPSETNGLT----GLAATLKRLRQTGVLHRKPEQVGRARDERFN------DSDEESAEHGKTRVKLSYTDEFGNKLTPKEAYRLLSHKFHGNAPKQNKREKRLQKVLE 528
            EE+ P ET        GL+  LK L+  G L    E  GR  D++ +      D DE    H K  +++  TDEFG  LTPKEA+RLLSHKFHG  P + K+EKR+++  E
Sbjct:  714 EEIVPDETIHEVAVGKGLSGALKLLKDRGTLKETVEWGGRNMDKKKSKLVGIVDDDESKDAHNKKEIRIERTDEFGRILTPKEAFRLLSHKFHGKGPGKMKQEKRMKQYYE 824          
BLAST of Gvermi5165.t1 vs. uniprot
Match: F0WG00_9STRA (U4/U6.U5 trisnRNPassociated protein putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WG00_9STRA)

HSP 1 Score: 73.2 bits (178), Expect = 6.630e-10
Identity = 46/91 (50.55%), Postives = 61/91 (67.03%), Query Frame = 0
Query:  440 GLAATLKRLRQTGVLH--RKPEQVGRARDERFNDSDEESAEHGKTRVKLSYTDEFGNKLTPKEAYRLLSHKFHGNAPKQNKREKRLQKVLE 528
            G+AATL+ LR+TG L   R   Q GRA D R  D D++     K  VKL Y DEFG  LT KEA+RLLS+KFHG+ P + ++EKR++++ E
Sbjct:  639 GVAATLELLRKTGNLKDTRVERQAGRANDARDRDFDDQL--RIKNGVKLDYRDEFGRLLTKKEAFRLLSYKFHGHEPGKKRKEKRIKQLKE 727          
BLAST of Gvermi5165.t1 vs. uniprot
Match: A0A024FSV4_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024FSV4_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 8.800e-10
Identity = 46/91 (50.55%), Postives = 61/91 (67.03%), Query Frame = 0
Query:  440 GLAATLKRLRQTGVLH--RKPEQVGRARDERFNDSDEESAEHGKTRVKLSYTDEFGNKLTPKEAYRLLSHKFHGNAPKQNKREKRLQKVLE 528
            G+AATL+ LR+TG L   R   Q GRA D R  D D++     K  VKL Y DEFG  LT KEA+RLLS+KFHG+ P + ++EKR++++ E
Sbjct:  646 GVAATLELLRKTGNLKDTRIERQAGRANDARDRDFDDQL--RIKNGVKLDYRDEFGRLLTKKEAFRLLSYKFHGHEPGKKRKEKRIKQLKE 734          
BLAST of Gvermi5165.t1 vs. uniprot
Match: A0A5D6XYL6_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XYL6_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 9.110e-10
Identity = 46/91 (50.55%), Postives = 61/91 (67.03%), Query Frame = 0
Query:  440 GLAATLKRLRQTGVLH--RKPEQVGRARDERFNDSDEESAEHGKTRVKLSYTDEFGNKLTPKEAYRLLSHKFHGNAPKQNKREKRLQKVLE 528
            G+AATL  LR+TG L   R   Q GRA D+R  D ++  A   K  VKL Y DEFG  LT KEA+R+LS+KFHG+ P + K+EKR++++ E
Sbjct:  696 GMAATLALLRKTGDLRETRVERQTGRANDQRERDVND--ALRVKDGVKLDYRDEFGRLLTKKEAFRVLSYKFHGHEPGKKKKEKRIKQLKE 784          
BLAST of Gvermi5165.t1 vs. uniprot
Match: A0A0P1ATF7_PLAHL (U4/U6.U5 snRNP associated protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1ATF7_PLAHL)

HSP 1 Score: 72.0 bits (175), Expect = 1.530e-9
Identity = 48/95 (50.53%), Postives = 60/95 (63.16%), Query Frame = 0
Query:  440 GLAATLKRLRQTGVLH--RKPEQVGRARDERFNDSDEESAEHGKTRVKLSYTDEFGNKLTPKEAYRLLSHKFHGNAPKQNKREKRLQKVLEKKRN 532
            G+AATL  LRQTG L   R   Q GRA D R    D +     K  VKL Y DEFG  LT KEA+R+LS+KFHG+ P + K+EKRL++ L++  N
Sbjct:  602 GMAATLALLRQTGDLKQTRIERQAGRANDVRDRTFDADL--RIKNGVKLDYRDEFGRLLTKKEAFRMLSYKFHGHEPGKRKKEKRLRQYLKRNNN 694          
BLAST of Gvermi5165.t1 vs. uniprot
Match: A0A0W8DEV4_PHYNI (ATP-dependent helicase rhp16 n=3 Tax=Phytophthora TaxID=4783 RepID=A0A0W8DEV4_PHYNI)

HSP 1 Score: 72.0 bits (175), Expect = 1.750e-9
Identity = 47/92 (51.09%), Postives = 60/92 (65.22%), Query Frame = 0
Query:  439 TGLAATLKRLRQTGVLHRK--PEQVGRARDERFNDSDEESAEHGKTRVKLSYTDEFGNKLTPKEAYRLLSHKFHGNAPKQNKREKRLQKVLE 528
            TG+AATL  LR+TG L +     Q GRA D R  D + E     K  VKL Y DEFG  LT KEA+R+LS+KFHG+ P + K+EKRL+++ E
Sbjct:  908 TGMAATLALLRKTGDLRQTHVERQAGRANDAR--DRNFEDDLRIKNGVKLDYRDEFGRLLTKKEAFRMLSYKFHGHEPGKKKKEKRLRQLKE 997          
The following BLAST results are available for this feature:
BLAST of Gvermi5165.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J6Y3_9FLOR1.190e-12552.59SART-1 family protein DOT2 n=1 Tax=Gracilariopsis ... [more]
R7QQK6_CHOCR9.890e-2630.29Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
K3X7K3_GLOUD8.880e-1252.17Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A7S1EUI3_9RHOD9.500e-1251.06Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
UPI0010A48F3F5.500e-1042.34SART-1 family protein DOT2-like n=1 Tax=Prosopis a... [more]
F0WG00_9STRA6.630e-1050.55U4/U6.U5 trisnRNPassociated protein putative n=1 T... [more]
A0A024FSV4_9STRA8.800e-1050.55Uncharacterized protein n=1 Tax=Albugo candida Tax... [more]
A0A5D6XYL6_9STRA9.110e-1050.55Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A0P1ATF7_PLAHL1.530e-950.53U4/U6.U5 snRNP associated protein n=1 Tax=Plasmopa... [more]
A0A0W8DEV4_PHYNI1.750e-951.09ATP-dependent helicase rhp16 n=3 Tax=Phytophthora ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005011SNU66/SART1 familyPFAMPF03343SART-1coord: 476..527
e-value: 1.2E-16
score: 60.5
IPR005011SNU66/SART1 familyPANTHERPTHR14152SQUAMOUS CELL CARCINOMA ANTIGEN RECOGNISED BY CYTOTOXIC T LYMPHOCYTEScoord: 254..531
IPR045347HIND motifPFAMPF19252HINDcoord: 57..79
e-value: 1.4E-9
score: 37.1
coord: 22..38
e-value: 7.2E-5
score: 22.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 516..534
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 272..321
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 420..439
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 246..261
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 371..385
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 365..385
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 181..321
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 453..488
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 453..534
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 181..216
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 217..245
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 133..168
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 76..103
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 145..163

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24228contigScGOVlb_24228:490161..491765 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi5165.t1Gvermi5165.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24228 490161..491765 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi5165.t1 ID=Gvermi5165.t1|Name=Gvermi5165.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=535bp
MDASSKPKPSKNVAGELVYSTEDTNRVRVALGLRPLSTADTEKPSLPAFQ
TISKNGEISCSVAETNKLRVALGLRPLQTSHASQPSASDAKRHQSTEDGH
ALKRRLQKARAARAARTVMAPLSISEELTKLEPKGTSLPAKEEVVPVTVK
KRKRDDRDTVQLPTHLENELGLGQHAELTLRDKHVLDDDGSQPFHRADQS
RKHDGDSNKDSDQSEIDGMNYDGTDTVQFRQEPQQPKNATSHNIERSDMI
VDDDFDKRPAFSKRKRNKRRRKRVAEEEQVTKGHLKALRLKEEQKNGDES
ENDDEYYQKMDAARRKAKREDRDRIAKQILERVNHSDSEKEEDALVAFSE
MEKISVDVPITDRDEKEKLFTSAPQSSAGASRETVVQSPIKTVNAVKTEN
LTNSSTKNFTEITSKPALAGSGSVPTAEEVHPSETNGLTGLAATLKRLRQ
TGVLHRKPEQVGRARDERFNDSDEESAEHGKTRVKLSYTDEFGNKLTPKE
AYRLLSHKFHGNAPKQNKREKRLQKVLEKKRNAS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005011SNU66/SART1
IPR045347HIND