Gvermi5161.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi5161.t1
Unique NameGvermi5161.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length318
Homology
BLAST of Gvermi5161.t1 vs. uniprot
Match: A0A2V3J6V4_9FLOR (DUF3598 domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6V4_9FLOR)

HSP 1 Score: 550 bits (1416), Expect = 2.400e-196
Identity = 259/317 (81.70%), Postives = 289/317 (91.17%), Query Frame = 0
Query:    1 MESESTNPKILPESGRLSTRQLNEESWQGYLKNLGTWVGKRALSNPRGKVLIDLPTRTTAERFRTPDGEDFVLWRFAVRTADGVDEAEEEWSRSELADLGALAVDGSFSVGGDFFCGEPMTVDQCLVDDACRIRTTHAFDWEGCVSGIIASRERIVPKNEPLEKALKLSFVEPAAWRSPKVLFDYILGLWEGKGISVHTRTGQVYKLTSRLKINQTIEGRVTESSVLRIGKDGPSRVYDASGRIDGNFIIYAMSNVQVFLLPGGVSIASPIRIRKGRPFTIESAFLMRPDCRKRVLRVYNNQCEWVNTVFINERRVG 317
            ME+    PK LP   +   RQL E SW+GYL+NLGTW+GKRALSN RGKVLIDLPTRTTAERFRTP  E+FVLWRFAVRTADG+DE EEEWSRSELAD GALA DG FSVG + F GEP+T+DQCL+D + R+RTTHAFDWEGCVSGI+A+RER+VPK EPLEK+LKLSFVEPAAWRSP++LFDYILG+WEGKGI+VH RTGQVY+LTSRLKI+Q+IEG+VTESS+LRIG++GPSRVYDASGRIDGNFIIYAMSNVQVFLLPGGVSI SPIRIRKGRPFTIESAFLMRPDCRKRV+R+YNNQCEWVNTVFINERRVG
Sbjct:    1 MEAGYEKPKYLPGDAKTGGRQLTEHSWEGYLRNLGTWIGKRALSNARGKVLIDLPTRTTAERFRTPQSEEFVLWRFAVRTADGIDEQEEEWSRSELADFGALAGDGCFSVGAEIFSGEPITIDQCLMDSSFRVRTTHAFDWEGCVSGIVATRERLVPKGEPLEKSLKLSFVEPAAWRSPRILFDYILGVWEGKGIAVHARTGQVYQLTSRLKISQSIEGKVTESSILRIGEEGPSRVYDASGRIDGNFIIYAMSNVQVFLLPGGVSIGSPIRIRKGRPFTIESAFLMRPDCRKRVIRLYNNQCEWVNTVFINERRVG 317          
BLAST of Gvermi5161.t1 vs. uniprot
Match: A0A7S2ZBA5_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZBA5_9RHOD)

HSP 1 Score: 226 bits (577), Expect = 5.200e-69
Identity = 121/293 (41.30%), Postives = 174/293 (59.39%), Query Frame = 0
Query:   26 SWQGYLKNLGTWVGKRALSNPRGKVLIDLPTRTTAERFRTPDGEDFVLWRF-AVRTADGVDEAEEEWSRSELADLGALAVDGSFSVGGDFFCGEPMTVDQCLVDDACRIRTTHAFDWEGCVSGIIASRERIVPKNEPLEKALKLSFVEPAAWRSPKVLFDYILGLWEGKGISVHTRTGQVYKLTSRLKINQTIEGRVTESSVLRIGKDGPSRVYDASGRIDGNFIIYAMSNVQVFLLPGGVSIASPIRIRKGRPFTIESAFLMRPDCRKRVLRVYNNQCEWVNTVFINERRVG 317
            SW G++ N+G W G+R L N  G  L+D+ T    ER   P+G   V WR  A R    VD  + EW+R ++   GA    GS+S+G     GE   +DQ  V    R+  ++A+DWEG +SG+I +RER   +   +++A     +EP+AW S   LFDY LG WEG GI  H ++G+   ++SR+++N  + G + + S L +   G  R   ++   DG+ +++A + VQ+FLLPGGVSIASPI I +G PF +E AFL+RPD R R+ R YN    W+NTVF+ ERRV 
Sbjct:   34 SWSGFVNNVGEWEGRRVLYNGNGVELLDVSTSARVERVDDPEG---VRWRTEAYREGGEVDIEDVEWTRRDVDLYGAAVESGSYSLGPSAIFGENFKIDQGAVASDVRVCASYAYDWEGKLSGLIVARER---RTNVVQRA-----IEPSAWNSSAALFDYYLGTWEGSGIITHRQSGRSIDVSSRIRLNFNLNGNLHQVSSLSV-IGGQHREVQSTAARDGSILLFANAGVQMFLLPGGVSIASPIIITRGEPFVVELAFLVRPDERIRIARCYNADGAWMNTVFLQERRVA 314          
BLAST of Gvermi5161.t1 vs. uniprot
Match: A0A2H2X6E5_9CYAN (DUF3598 domain-containing protein n=2 Tax=unclassified Calothrix TaxID=2619626 RepID=A0A2H2X6E5_9CYAN)

HSP 1 Score: 102 bits (255), Expect = 6.020e-22
Identity = 73/295 (24.75%), Postives = 140/295 (47.46%), Query Frame = 0
Query:   27 WQGYLKNLGTWVGKRALSNPRGKVLIDLPTRTTAERFRTPDGEDFVLWRFAVRTADGVDEAEEEWSRSELADLGALAVDGSFSVGG-DFFCGEPMTVDQCLVDDACRIRTTHAFDWEGCVSGIIASRERIVPKNEPLEKALKLSFVEPAAWRSPKVLFDYILGLWEGKGISVHTRTGQVYKLTSRLKINQTIEGRVTESSVLRIGKD---GPSRVYDASGRIDGNFIIYAMSNVQVFLLPGGVSIASPIRIRKGRPFTIESAFLMRPDCRKRVLRVYNNQCEWVNTVFINERRVG 317
            W+ +LKNL  WVG     +P+G+ + D P+R T E           L R      +G+ +   E+S    + L     +G+FS G   F  G     +  L+    R+R    F+ +G +  +   RE     +E  +K  +           P +  + +LG WEG+  +++T        T+++K++   +G + ++  L  G       +++ D+    DGN      + +Q+ +LP G S   P++ +  +P  +E+A+L+ P+ R+R++R Y+++ EWV+   ++ER+V 
Sbjct:    5 WESFLKNLNVWVGSFTQFSPQGEQIEDRPSRLTLEGLNDNQSARLTLQR------EGLQDLVLEFSTMSRSTL--FFENGAFSQGTIQFAPGTEFGAEFGLIHQNRRLRLVQLFNNDGNLKSLTLIREH----SEGSDKDER-----------PPLTVEALLGEWEGETTTIYTDLRNPVTSTTKMKLHLDSQGHLVQN--LSFGDHTITSTAKINDSILEFDGN----PSNAIQILMLPDGASATFPVKAQPRQPLFLETAWLIEPNWRQRMIRSYDDRGEWVSLTLVSERKVS 270          
The following BLAST results are available for this feature:
BLAST of Gvermi5161.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3J6V4_9FLOR2.400e-19681.70DUF3598 domain-containing protein n=1 Tax=Gracilar... [more]
A0A7S2ZBA5_9RHOD5.200e-6941.30Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
A0A2H2X6E5_9CYAN6.020e-2224.75DUF3598 domain-containing protein n=2 Tax=unclassi... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012674CalycinGENE3D2.40.128.20coord: 23..158
e-value: 2.8E-10
score: 42.6
IPR012674CalycinGENE3D2.40.128.20coord: 177..316
e-value: 6.5E-25
score: 89.7
IPR012674CalycinSUPERFAMILY50814Lipocalinscoord: 182..315
IPR022017Domain of unknown function DUF3598PFAMPF12204DUF3598coord: 26..312
e-value: 5.9E-21
score: 75.1
NoneNo IPR availablePANTHERPTHR33404:SF1SLL0497 PROTEINcoord: 26..315
IPR005527Cell division topological specificity factor MinEPANTHERPTHR33404CELL DIVISION TOPOLOGICAL SPECIFICITY FACTOR HOMOLOG, CHLOROPLASTICcoord: 26..315

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24228contigScGOVlb_24228:482758..483711 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi5161.t1Gvermi5161.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24228 482758..483711 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi5161.t1 ID=Gvermi5161.t1|Name=Gvermi5161.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=318bp
MESESTNPKILPESGRLSTRQLNEESWQGYLKNLGTWVGKRALSNPRGKV
LIDLPTRTTAERFRTPDGEDFVLWRFAVRTADGVDEAEEEWSRSELADLG
ALAVDGSFSVGGDFFCGEPMTVDQCLVDDACRIRTTHAFDWEGCVSGIIA
SRERIVPKNEPLEKALKLSFVEPAAWRSPKVLFDYILGLWEGKGISVHTR
TGQVYKLTSRLKINQTIEGRVTESSVLRIGKDGPSRVYDASGRIDGNFII
YAMSNVQVFLLPGGVSIASPIRIRKGRPFTIESAFLMRPDCRKRVLRVYN
NQCEWVNTVFINERRVG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012674Calycin
IPR022017DUF3598
IPR005527MinE