Gvermi5138.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi5138.t1
Unique NameGvermi5138.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length772
Homology
BLAST of Gvermi5138.t1 vs. uniprot
Match: A0A2V3J6Q1_9FLOR (Protein aardvark n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6Q1_9FLOR)

HSP 1 Score: 844 bits (2180), Expect = 9.730e-298
Identity = 465/740 (62.84%), Postives = 557/740 (75.27%), Query Frame = 0
Query:   37 LPDHQPTVRYVRGVVADARHTLRTAADRAAFLAAVLGDGSLAQLALDDAPLLLQLQTRAAVVVREVAARVAAAAAAHHLDVDALVAVLAVLAVEWPLLLDVMEREAVTTLVLDVLNRSSSRPSLVARCLTALRAFTVTDPMRRRVMFDGTVPLTLQLMQRHAHSPRVQERAIALMANISFGCAHRKRVITRQGAIKAILHAMNTFPTDHNIQLRSALAIRNLTHQTQVNQYIAGNEGAVEAIASAMLRFRGNTVNPELRFQCIMALESLCHEHQRNRQRLIDVDAAPLSFPNTLCTSSSAELLKRCDD-DQHEIVDEHGDVVVEEEQPLVSDVTPHFSLGAALCPGKVVSNLVASPSVSSCGYSDRAPTSPVSNRDQSPEKLKMQL---EHAEQPSINKPSIIRAIIHAMRRDPDDALLLETSLTVLTLIALHNVQVQHRIGQFGGIQVAVAAIKRHPKHAAVATKSCALIRCLCLQEANRRLVTSGLPVLISALNEHRNVPDVVREVAAALSNAVFESEKNSAWVVNKGGIKAIILAMNDCGAKDVMVLDAGICAMRNFVDSSYSGALSAVNDGAVQAAVNALDRTKSASTKGECIVQEQAVLFLVDVASLAPQSKKYMRDADASDWIENALAKLSAERYAELHSVADSLLTELSEQAEDVYEKTRNAGS-SQRTSAKPTGRSPRGLFGGFLLPRRAATSADTRKVFGGRSMPLGSGRNDVPRKGKRLSTRFRFGTALS 771
            L +   T+ +VR  +A+ +  L  +A RA+F+ +VLGD SLA  A  DAPLL QLQTRAA++VRE++  + +       D DALVA+LA+LAV+WPLLLD++E+   T LV   + R   R S+++RCLTALRAFTVTD MRRRVMFDG + LTLQLM ++ +S R+Q+RA+ LMANI+FGC HRK                                                        AS +LRFRG+TVNPELRFQCIMALESLCH+HQRNRQRLI+ DA PLSFPNT+ + ++A L    +  D+ +IVDEHGD+VV+EEQ L+SDVTPHFS GAALCPGK+VSNLVASPSVSS  YSDR+PTSP+  +    +  K      E  EQPSI KPS++RAIIHAMRRDP+DA+LLET+L+VLTLIALHNVQVQH IG FGGIQVAVAAIKRHPKH AVATK+ ALIRCLCLQEANRRL+TSGLPVLISAL +HRNVPDVVREVA+ALSNAVFESEKN AWVVNKGG+ A+I AM++CG+KDVMVLDAG+CA+RNFVDSSYSGALSAV DGAVQAA++ALDRTK AST GECIVQEQAVLFLVDVA+LAPQ+KK M D DA+DWIENALAKL  +RY +LH+ AD+LL+ELSEQ    + K++ A + +Q  S K + + PRG+FGGFLLP+R+AT+ D RK FGGRSMPLG  RN+  RKGKRLSTR RF T LS
Sbjct:   40 LSEESATITFVRATLANPKTALHNSAARASFIRSVLGDQSLAVEADTDAPLLRQLQTRAAIIVREISTPLQST---DDFDTDALVALLALLAVKWPLLLDIVEQHGATLLVKQTILRWQHRVSIISRCLTALRAFTVTDAMRRRVMFDGIIDLTLQLMDQYPNSRRIQDRALPLMANIAFGCPHRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASTILRFRGSTVNPELRFQCIMALESLCHQHQRNRQRLIEFDATPLSFPNTISSITTAPLSNSSNQQDEDDIVDEHGDLVVDEEQVLISDVTPHFSHGAALCPGKIVSNLVASPSVSSSTYSDRSPTSPLPAKGPPLDNEKQNAFIAEQEEQPSIKKPSVVRAIIHAMRRDPNDAMLLETALSVLTLIALHNVQVQHTIGHFGGIQVAVAAIKRHPKHPAVATKASALIRCLCLQEANRRLITSGLPVLISALKDHRNVPDVVREVASALSNAVFESEKNRAWVVNKGGVPALIQAMSECGSKDVMVLDAGVCALRNFVDSSYSGALSAVKDGAVQAALDALDRTKDASTAGECIVQEQAVLFLVDVAALAPQTKKRMCDLDAADWIENALAKLKPDRYPDLHAAADNLLSELSEQESCKFGKSKPAAAENQSGSTKLSTKPPRGIFGGFLLPKRSATTTDVRKRFGGRSMPLGGNRNEPGRKGKRLSTRLRFTTHLS 776          
BLAST of Gvermi5138.t1 vs. uniprot
Match: R7Q6L1_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q6L1_CHOCR)

HSP 1 Score: 566 bits (1458), Expect = 1.060e-188
Identity = 363/775 (46.84%), Postives = 481/775 (62.06%), Query Frame = 0
Query:   10 PPRQPPDPAAPDACDGPPSFAPSIPQHLPDHQPTVRYVRGVVADARHTLRTAADRAAFLAAVLGDGSLAQLALDDAPLLLQLQTRAAVVVREVAARVAAAAAAHHLDVDALVAVLAVLAVEWPLLLD-VMEREAVTTLVLDVLNRSSSRPSLVARCLTALRAFTVTDPMRRRVMFDGTVPLTLQLMQRHAHSPRVQERAIALMANISFGCAHRKRVITRQGAIKAILHAMNTFPTDHNIQLRSALAIRNLTHQTQVNQYIAGNEGAVEAIASAMLRFRGNTVNP---ELRFQCIMALESLCHEHQRNRQRLIDVDAAPLSFPNTLC--TSSSAELLKRCDDDQ-HEIVDEHGDVVVEEEQPLVSDVTPHFSLGAALCPGKVVSNLVASPSVSSCGYSDRAPTSPVSNRDQSPEKLKMQLEHA---EQPSINKPSIIRAIIHAMRRDPDDALLLETSLTVLTLIALHNVQVQHRIGQFGGIQVAVAAIKRHPKHAAVATKSCALIRCLCLQEANRRLVTSGLPVLISALNEHRNVPDVVREVAAALSNAVFESEKNSAWVVNKGGIKAIILAMNDCGAKDVMVLDAGICAMRNFVDSSYSGALSAVNDGAVQAAVNALDRTKSASTKGECIVQEQAVLFLVDVASLAPQSKKYMRDADASDWIENALAKLSAERYAELHSVADSLLTELSEQAEDVYEKTRNAGSSQRTSAKPTGRSPRGLFGGFLLPRRAATSADTRKVFGG----RSMPLGSGRNDVPRKGKRLSTRFRFGTAL 770
            PP   P+PA+    DGPPS  P     +     T+ YV  V A    TL  +  RA F+ A+LGD  LA  A DD  L  QL TRA  + R+ +  + A++       + +++   + A +WP+LLD ++  +AV ++VL +  R  + P++VAR LT LR F VTD MRR  MF G V L L+LM  HA   RVQ RA   +AN++FGC HRKR I RQ A+ A++  M+TFP +  IQ   AL +RNLT   QVNQYIAGNEGAVEA+A+A+LRFR ++ +P   ELR QC++ALESLC    RN QRL++VD   ++  ++    + S A   KR  +DQ  E+++E GDVVV+EE+ L    TPHFS GAALCPG+  S LVAS S SS G     P+  +  R     K +   E A   E     K SI+R++IH +RRDPDD LLLET L++LT ++L+  +VQ +IGQ GG+ VA+A+IKRHPK   V + + ALIRCLCLQE+NR LVTSGL VLI+ + E     DVVRE+ +ALSNAVF  EKN +WV+N GGI++++ A+N CG+KDVMVL+AG+CA+RNFVDSS +GALSAV +GA++AAV AL  TK AS+ G+ IVQEQAVLFLVD+A LAPQS   M   DA+DWIEN+LAKL   ++ ELH+  D L+  L+  A      T     S     +      R +F     PR + T A    +       ++ P  +G +    K KRLS R R    L
Sbjct:   19 PPGHEPEPAS----DGPPSTFPDQVDPV-----TLDYVTSVFASPSTTLFNSPARADFINALLGDTRLAHDAEDDRVLHCQLATRAVELARQASIVLQASSPDES---EHVLSTFTLFAAKWPILLDDIVRTDAVNSVVLCI-RRLRTHPTVVARGLTVLRTFAVTDSMRRDAMFHGAVDLALELMAEHAADHRVQYRAAVFIANVAFGCTHRKRRIARQSAVAAVVRGMDTFPDNDRIQSAGALMVRNLTADAQVNQYIAGNEGAVEAVAAALLRFRASS-SPRACELRLQCVLALESLCRHDDRNTQRLLNVDTLFMATGDSEVGLSLSPASRAKRSGEDQVQELLNEDGDVVVDEEELLTLSETPHFSHGAALCPGR--SPLVASVS-SSAGSDKTIPSLGIERRTSCNNKGREVDEPAQLNEGGHAEKKSIMRSLIHTIRRDPDDTLLLETCLSLLTRLSLNRGEVQSKIGQLGGVHVAIASIKRHPKSKPVVSSASALIRCLCLQESNRSLVTSGLQVLIACVKEFFKDGDVVRELVSALSNAVFRHEKNRSWVINHGGIESVVQAVNQCGSKDVMVLEAGLCALRNFVDSSCNGALSAVEEGAIKAAVTALSITKDASSTGQRIVQEQAVLFLVDMAKLAPQSTDAMEAVDAADWIENSLAKLPLTQHPELHTAGDELINTLAADAPPGSAATDTEKQSSHQRERVERPMSRRIFARLSFPRVSVTKAPFGSIKSESPDKKASPRDNGASKSGSKVKRLSQRLRLSARL 776          
The following BLAST results are available for this feature:
BLAST of Gvermi5138.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J6Q1_9FLOR9.730e-29862.84Protein aardvark n=1 Tax=Gracilariopsis chorda Tax... [more]
R7Q6L1_CHOCR1.060e-18846.84Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000225ArmadilloSMARTSM00185arm_5coord: 551..594
e-value: 170.0
score: 3.8
coord: 262..307
e-value: 38.0
score: 8.8
coord: 218..260
e-value: 0.98
score: 18.4
coord: 509..549
e-value: 8.2
score: 13.9
coord: 175..216
e-value: 10.0
score: 13.2
IPR000225ArmadilloPROSITEPS50176ARM_REPEATcoord: 185..229
score: 9.0824
IPR000225ArmadilloPROSITEPS50176ARM_REPEATcoord: 518..562
score: 10.0624
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 422..707
e-value: 7.8E-21
score: 76.1
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 59..358
e-value: 7.6E-21
score: 76.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..36
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 694..715
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 8..24
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 697..712
NoneNo IPR availablePANTHERPTHR22895:SF7PROTEIN AARDVARKcoord: 221..308
NoneNo IPR availablePANTHERPTHR22895:SF7PROTEIN AARDVARKcoord: 140..285
NoneNo IPR availablePANTHERPTHR22895UNCHARACTERIZEDcoord: 221..308
NoneNo IPR availablePANTHERPTHR22895:SF7PROTEIN AARDVARKcoord: 428..618
NoneNo IPR availablePANTHERPTHR22895UNCHARACTERIZEDcoord: 140..285
coord: 428..618
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 429..684
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 143..324

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24228contigScGOVlb_24228:363390..365705 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi5138.t1Gvermi5138.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24228 363390..365705 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi5138.t1 ID=Gvermi5138.t1|Name=Gvermi5138.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=772bp
MSSASPVAAPPRQPPDPAAPDACDGPPSFAPSIPQHLPDHQPTVRYVRGV
VADARHTLRTAADRAAFLAAVLGDGSLAQLALDDAPLLLQLQTRAAVVVR
EVAARVAAAAAAHHLDVDALVAVLAVLAVEWPLLLDVMEREAVTTLVLDV
LNRSSSRPSLVARCLTALRAFTVTDPMRRRVMFDGTVPLTLQLMQRHAHS
PRVQERAIALMANISFGCAHRKRVITRQGAIKAILHAMNTFPTDHNIQLR
SALAIRNLTHQTQVNQYIAGNEGAVEAIASAMLRFRGNTVNPELRFQCIM
ALESLCHEHQRNRQRLIDVDAAPLSFPNTLCTSSSAELLKRCDDDQHEIV
DEHGDVVVEEEQPLVSDVTPHFSLGAALCPGKVVSNLVASPSVSSCGYSD
RAPTSPVSNRDQSPEKLKMQLEHAEQPSINKPSIIRAIIHAMRRDPDDAL
LLETSLTVLTLIALHNVQVQHRIGQFGGIQVAVAAIKRHPKHAAVATKSC
ALIRCLCLQEANRRLVTSGLPVLISALNEHRNVPDVVREVAAALSNAVFE
SEKNSAWVVNKGGIKAIILAMNDCGAKDVMVLDAGICAMRNFVDSSYSGA
LSAVNDGAVQAAVNALDRTKSASTKGECIVQEQAVLFLVDVASLAPQSKK
YMRDADASDWIENALAKLSAERYAELHSVADSLLTELSEQAEDVYEKTRN
AGSSQRTSAKPTGRSPRGLFGGFLLPRRAATSADTRKVFGGRSMPLGSGR
NDVPRKGKRLSTRFRFGTALS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000225Armadillo
IPR011989ARM-like
IPR016024ARM-type_fold