Gvermi5133.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi5133.t1
Unique NameGvermi5133.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length162
Homology
BLAST of Gvermi5133.t1 vs. uniprot
Match: A0A2V3J6N8_9FLOR (MRP-S23 domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6N8_9FLOR)

HSP 1 Score: 212 bits (539), Expect = 1.030e-67
Identity = 110/159 (69.18%), Postives = 132/159 (83.02%), Query Frame = 0
Query:    1 MKRLVEAGVASKPIWMDIVEATRPPFTPVAATKVPEIIYPEDRLRSIYLKRNPQARRMPLNLKAKSIPERHIADRFVTLQMQYMQEQGLSEERAYEEADRVLVEYKKEMDQNLKDQDVDGSLLNPDITDAASRAYMASVLDSKRDQKLHQALLEQAETE 159
            MKRLV AGV  KP WMDIVEATRP F+PV  TK PEI+YPEDRLRSI+L+RNP A RMP+NLKAKS  ERHI+DRFV LQM++M EQGLSE +AYEEADRVL E K++M++ L + D  GSL+NP I D A+RA+MAS+ DSKRDQKLH+AL+E+ +TE
Sbjct:   11 MKRLVSAGVIRKPAWMDIVEATRPVFSPVTVTKAPEIMYPEDRLRSIFLQRNPDAHRMPINLKAKSKEERHISDRFVALQMKFMDEQGLSENKAYEEADRVLAEQKEQMNRILDEYDTTGSLVNPFIEDEAARAFMASLADSKRDQKLHEALIERKQTE 169          
BLAST of Gvermi5133.t1 vs. uniprot
Match: A0A2P6NKG1_9EUKA (MRP-S23 domain-containing protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NKG1_9EUKA)

HSP 1 Score: 67.4 bits (163), Expect = 3.170e-10
Identity = 40/99 (40.40%), Postives = 60/99 (60.61%), Query Frame = 0
Query:    5 VEAGVASKPIWMDIVEATRPPFTPVAATK----VPEIIYPEDRLRSIYLKRNPQARRMPLNL-KAKSIPERHI---ADRFVTLQMQYMQEQGLSEERAY 95
            ++AGV  KP+W D+     P   P+   K    + EI++PEDRLR+IYL+RNP+    PL     +S  E  I   AD FV+ Q++++QE+G +E +AY
Sbjct:   17 LKAGVICKPLWFDVAATLAPKMPPILTRKQRPKLKEIVFPEDRLRNIYLQRNPEGHLYPLRFFPHESTAEYMITSPADVFVSKQIEFIQEKGHTENQAY 115          
BLAST of Gvermi5133.t1 vs. uniprot
Match: A0A7S0N2B8_9CHLO (Hypothetical protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0N2B8_9CHLO)

HSP 1 Score: 63.5 bits (153), Expect = 1.480e-9
Identity = 38/108 (35.19%), Postives = 60/108 (55.56%), Query Frame = 0
Query:    1 MKRLVEAGVASKPIWMDIVEATRPPFTPVAATKVPEIIYPEDRLRSIYLKRNPQARRMPLNLKAKSIPERHIADRFVTLQMQYMQEQGLSEERAYEEADRVLVEYKKE 108
            M+ L+++    +P+W   V  T P   P+ A++ P+I+Y ED L   Y+KRNP+A  +PLN+ +    E H    F   Q++ M+  G S E AY+  +R L   K+E
Sbjct:   14 MRHLLKSNAVKEPLWYQAVARTPPAEMPLKASRPPKIVYEEDTLIRSYMKRNPEAAFLPLNMTST---EPHFVRTFAWRQLELMKA-GYSREEAYQLTERELESEKRE 117          
BLAST of Gvermi5133.t1 vs. uniprot
Match: A0A7S3AD82_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3AD82_9EUKA)

HSP 1 Score: 58.2 bits (139), Expect = 1.320e-7
Identity = 40/96 (41.67%), Postives = 52/96 (54.17%), Query Frame = 0
Query:    4 LVEAGVASKPIWMDIVEATRPPFTPVAATKVPEIIYPEDRLRSIYLKRNPQARRMPLNLKAK-SIPE---RHIADRFVTLQMQYMQEQGLSEERAY 95
            LV+ GV  KP+W D + A  PP       K   + + EDRLR ++LKRNP     P  L    S PE    H AD FV  Q++YM++ G +EE AY
Sbjct:   62 LVKGGVIPKPLWYDAMRAHMPPLKLQKDAKPMRLEWEEDRLRKVWLKRNPSGTMEPKALFIDPSHPEANHEHPADTFVNQQIKYMRK-GYTEEEAY 156          
The following BLAST results are available for this feature:
BLAST of Gvermi5133.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3J6N8_9FLOR1.030e-6769.18MRP-S23 domain-containing protein n=1 Tax=Gracilar... [more]
A0A2P6NKG1_9EUKA3.170e-1040.40MRP-S23 domain-containing protein n=1 Tax=Planopro... [more]
A0A7S0N2B8_9CHLO1.480e-935.19Hypothetical protein n=1 Tax=Pyramimonas obovata T... [more]
A0A7S3AD82_9EUKA1.320e-741.67Hypothetical protein (Fragment) n=1 Tax=Haptolina ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 95..115
IPR023611Ribosomal protein S23/S25, mitochondrialPFAMPF10484MRP-S23coord: 2..104
e-value: 6.4E-11
score: 42.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24228contigScGOVlb_24228:357427..357912 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi5133.t1Gvermi5133.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24228 357427..357912 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi5133.t1 ID=Gvermi5133.t1|Name=Gvermi5133.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=162bp
MKRLVEAGVASKPIWMDIVEATRPPFTPVAATKVPEIIYPEDRLRSIYLK
RNPQARRMPLNLKAKSIPERHIADRFVTLQMQYMQEQGLSEERAYEEADR
VLVEYKKEMDQNLKDQDVDGSLLNPDITDAASRAYMASVLDSKRDQKLHQ
ALLEQAETERN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023611Ribosomal_S23/S25_mit