Gvermi5130.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gvermi5130.t1
Unique Name	Gvermi5130.t1
Type	polypeptide
Organism	Gracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length	613

Homology

[Close]

BLAST of Gvermi5130.t1 vs. uniprot
Match: A0A2V3J727_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J727_9FLOR)

HSP 1 Score: 931 bits (2406), Expect = 0.000e+0
Identity = 454/591 (76.82%), Postives = 523/591 (88.49%), Query Frame = 0

Query:   23 LVSGGTSYKSTLRYQSGTDVTDLSKSLFSPHDDPLAEEDRWSALSDTQREAWTASNEVIRFSEGMRDVLRAIAHLRQSSIRLYIDVQIVAPEHFITSEQQRKISHYAKAMTAGSNGTSLIFTVSMAPKHLFRRVAMHSPTDDPNLFMGLLQQTAATAGSPHVMYVIVNHGDDPINHYEARTPFLGTGRTSWVLYTVEKKKSLNVAHLLSAVERIAQRVYAPEPLYFPVPFIRELTVQVTAYTPGFEHRARWLDTFDWNGFENVVRNVAVHGQHLRFSSSQVNSDCPVCEKAFRDADKPSREYVRRAALALNGNAPLNHTWASGVPASPTHQRLSPNTFRMYVLDLHKTRISESVQRLENKPLSFFPGMGILTFRSTEKDSMAALDTLFVQAFVAAVHGISEPNLYHTLQRGQRPSKQGKPSTVMADVACRYLVRSIVETRIAQLEEIMEGILYFDIDPAKSLGDLQYAYFSQRVNLMLFKLQHAQQSLSDAHDAETAVYLAASTLHDIRAIRAAFDIDDEKDSFERFRDPTLRCHFSRLKREALRASYFLESD-SMLLHALGCVLAFLGSAGVSNFILWKYTAWRRQGKRE 612
            +V  GTSYKST RYQS TDV DLS+SLFSPH+DPLAEEDRWSALSDTQREAWTASNEVIRFSEGMRDVLRA + LRQS + ++++VQI+APEHFI+ E + +I HYA AMTAGSNGT ++F VS+APKHLF+RVAMHSP+DDP  FMGLLQQTAAT GS HVMYVIVNHGDDPINHYEARTPFLGTGRT WVLYT+E+KKSLNVA LL++VERIAQRVYAP+PLYFPVPFI+ELTVQV+AYTPG EHRA WLD FDW+GFE+ ++NVAV  +HLRFSSSQVNS+CP+C KAFR++DKPSR++V+RAAL LN   P N+TWA+GV ++   +R+ PNTFR+YVLDLHKTR SE VQRLENKPLSFFPGMGI+ FRST++D++AAL+TLFVQAF AAV+GISEPNLYHTL+RG++ SKQG+PSTVM DV  RYLVRSIVETRIA+LEEIMEGI+YFDIDPAKSLGDLQYAYF+QRVNLMLFKLQHAQ  LSD+HDA TA+YLAAST HDIRAIR AFD+ +EK +FERFRDPTLRCHFSRLKREALRASYFLES  S     + C L FLG   +SNF+L K+TAW+R+GKRE
Sbjct:    1 MVIAGTSYKSTFRYQSSTDVNDLSRSLFSPHEDPLAEEDRWSALSDTQREAWTASNEVIRFSEGMRDVLRATSTLRQSPMLMHVNVQIIAPEHFISVEDENRIIHYASAMTAGSNGTKIMFNVSLAPKHLFKRVAMHSPSDDPTHFMGLLQQTAATLGSTHVMYVIVNHGDDPINHYEARTPFLGTGRTCWVLYTIERKKSLNVADLLTSVERIAQRVYAPKPLYFPVPFIKELTVQVSAYTPGVEHRAHWLDHFDWDGFEDAIKNVAVPSEHLRFSSSQVNSECPMCAKAFRESDKPSRDFVQRAALTLNEMVPFNNTWANGVFSTALRRRVPPNTFRLYVLDLHKTRQSEPVQRLENKPLSFFPGMGIVIFRSTDEDAVAALNTLFVQAFAAAVYGISEPNLYHTLKRGKKSSKQGRPSTVMTDVVSRYLVRSIVETRIAELEEIMEGIIYFDIDPAKSLGDLQYAYFAQRVNLMLFKLQHAQMLLSDSHDAATAIYLAASTSHDIRAIRLAFDLSEEKATFERFRDPTLRCHFSRLKREALRASYFLESTYSRFREMIMCTLTFLGFTALSNFLLRKHTAWKRRGKRE 591

The following BLAST results are available for this feature:

BLAST of Gvermi5130.t1 vs. uniprot

BLAST of Gvermi5130.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3J727_9FLOR	0.000e+0	76.82	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 22..26
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..26
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 601..612
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 27..576
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 577..600
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..10
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 11..21
None	No IPR available	TMHMM	TMhelix		coord: 578..600

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
ScGOVlb_24228	contig	ScGOVlb_24228:350407..352245 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gvermi5130.t1	Gvermi5130.t1	Gracilaria vermiculophylla HapMaleFtJ_2017 male	mRNA	ScGOVlb_24228 350407..352245 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gvermi5130.t1 ID=Gvermi5130.t1|Name=Gvermi5130.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=613bp
MGRRFICMSKLSQLFVFLQLAALVSGGTSYKSTLRYQSGTDVTDLSKSLF
SPHDDPLAEEDRWSALSDTQREAWTASNEVIRFSEGMRDVLRAIAHLRQS
SIRLYIDVQIVAPEHFITSEQQRKISHYAKAMTAGSNGTSLIFTVSMAPK
HLFRRVAMHSPTDDPNLFMGLLQQTAATAGSPHVMYVIVNHGDDPINHYE
ARTPFLGTGRTSWVLYTVEKKKSLNVAHLLSAVERIAQRVYAPEPLYFPV
PFIRELTVQVTAYTPGFEHRARWLDTFDWNGFENVVRNVAVHGQHLRFSS
SQVNSDCPVCEKAFRDADKPSREYVRRAALALNGNAPLNHTWASGVPASP
THQRLSPNTFRMYVLDLHKTRISESVQRLENKPLSFFPGMGILTFRSTEK
DSMAALDTLFVQAFVAAVHGISEPNLYHTLQRGQRPSKQGKPSTVMADVA
CRYLVRSIVETRIAQLEEIMEGILYFDIDPAKSLGDLQYAYFSQRVNLML
FKLQHAQQSLSDAHDAETAVYLAASTLHDIRAIRAAFDIDDEKDSFERFR
DPTLRCHFSRLKREALRASYFLESDSMLLHALGCVLAFLGSAGVSNFILW
KYTAWRRQGKRE*