Gvermi5116.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi5116.t1
Unique NameGvermi5116.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length373
Homology
BLAST of Gvermi5116.t1 vs. uniprot
Match: A0A2V3J6M5_9FLOR (Phosphatidylinositol transfer protein 3 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6M5_9FLOR)

HSP 1 Score: 308 bits (790), Expect = 1.460e-100
Identity = 156/277 (56.32%), Postives = 203/277 (73.29%), Query Frame = 0
Query:    1 MLIREYRIPFPATLAEYRIGMLYMISRATEEENRRCAGGQAVRVVTRRRFTDAQRGISGMYSEKHLQVRNLLPTFIKLLVPAHKCVLVERAWNAFPHYCLTTYESPFFGSAFQLSIQSRYIEGDAGGVHNALALSPRELAERHVVLLDLASEEHVKMTRDTDVVRFHSKRAARAPLDAHGRWMTRAVPVMCCYKLVRLRVSIASLPSRRVEEWCHRHAVVRAFVHYNRQVLCWMDHC-GIAISSK---C--TDAYAALNKREYGCLVLKIETDSVVL 271
            MLI+EYRIPFPATL EYRIGMLYM++RATEEENRR  G   V++VTRR F D +RGI G+Y+EK++  RN LP+F+K+ +   KC+LVE+AWNAFP YCLTTYE+   G +F LS++SRYI  D G V NAL LS  ELA R VV L++ASEEH+KMT +T+V +F S+ + R+ LDA G W+ +  PVMCCYK+VR  VS   +P+RR+E+W HR+A+  AFVHYNRQVLCWMD   G+ IS+    C       A+++R++G L  +IE  + VL
Sbjct:    1 MLIKEYRIPFPATLEEYRIGMLYMVARATEEENRRSNGQPTVQLVTRRSFEDKKRGIKGIYTEKYVHTRNFLPSFMKVFLAEQKCILVEKAWNAFPDYCLTTYENHLLGRSFHLSVESRYIGNDRGCVENALKLSEEELAHREVVDLNIASEEHLKMTAETNVAKFESRVSKRSRLDAQGEWIAQGSPVMCCYKVVRFDVSAKGMPARRIEQWGHRNAMQAAFVHYNRQVLCWMDQWYGLDISAVDGLCGKRGELGAISERKHG-LRPRIEAAATVL 276          
BLAST of Gvermi5116.t1 vs. uniprot
Match: UPI000644DA98 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644DA98)

HSP 1 Score: 161 bits (407), Expect = 1.090e-43
Identity = 90/237 (37.97%), Postives = 135/237 (56.96%), Query Frame = 0
Query:    1 MLIREYRIPFPATLAEYRIGMLYMISRATEEENRRCAGGQAVRVVTRRRFTDAQRGISGMYSEKHLQVRNLLPTFIKLLVPAHKCVLVERAWNAFPHYCLTTYESPFFGSAFQLSIQSRYIEGDAGGVHNALALSPRELAERHVVLLDLASE--EHVKMTRDTDVVRFHSKRAARAPLDAHGRWMTRAVPVMCCYKLVRLRVSIASLPSRRVEEWCHRHAVVRAFVHYNRQVLCWMD 235
            MLIREYRIP P TL EY+IG LYM+++ ++      + G+ V +V  + + D +    G Y+ K   + + LP +++++VP     + E+AWNAFP YC T Y  PF G  F LSI++RY++ DAG   N L L P +L+ R V ++D+A +  E  K   + D   F SK+  R  LD    W+    P+MC YK+ +    +  L +R VE++ H+ AV       +RQV CW+D
Sbjct:    1 MLIREYRIPMPLTLEEYKIGQLYMVAKVSKNHT---SNGEGVEIVDNKPYVDGE--FKGQYTHKIFHIGSRLPNWLRVIVPQTALQVEEKAWNAFP-YCKTQYACPFLGERFSLSIETRYVQ-DAGVQDNCLNLGPEDLSVREVDVVDIAFDPIEPTKYKVEEDPTLFESKKTGRGKLDKD--WIKTNSPMMCSYKVCKAEFKVWGLQTR-VEQFIHKTAVRDILFMGHRQVFCWID 227          
BLAST of Gvermi5116.t1 vs. uniprot
Match: D3B5V9_POLPP (Phosphatidylinositol transfer protein n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3B5V9_POLPP)

HSP 1 Score: 147 bits (370), Expect = 4.200e-38
Identity = 85/237 (35.86%), Postives = 130/237 (54.85%), Query Frame = 0
Query:    1 MLIREYRIPFPATLAEYRIGMLYMISRATEEENRRCAGGQAVRVVTRRRFTDAQRGISGMYSEKHLQVRNLLPTFIKLLVPAHKCVLVERAWNAFPHYCLTTYESPFFGSAFQLSIQSRYIEGDAGGVHNALALSPRELAERHVVLLDLASE--EHVKMTRDTDVVRFHSKRAARAPLDAHGRWMTRAVPVMCCYKLVRLRVSIASLPSRRVEEWCHRHAVVRAFVHYNRQVLCWMD 235
            +LIREYRIP P T+ EY+I  LYM+++ +       + G+ V ++  + FT+    ++G ++ K   + + LPT++K + P    V  E+AWNA+P YC T Y  PF G  F +SI++RY + DAG   N L L P ELA R V  +D+A +  + +K   + D   F S++  R  L     WM    PVMC YK+ ++        ++ VE++  R A+       +RQV CWMD
Sbjct:    2 VLIREYRIPLPITVDEYKIAQLYMVAKVSRNHT---SNGEGVEIIENKPFTEG--ALTGQFTHKIFHLASRLPTWLKAIAPTSLQV-EEKAWNAYP-YCKTQYACPFLGDRFSISIETRYTQ-DAGTQENCLNLQPEELAVREVDFVDIAYDPIDPIKYKPEEDPALFVSQKTGRGKLSRD--WMKNTSPVMCSYKVCKVEFKYWGFQTK-VEQFIQRAAIRDILFMGHRQVFCWMD 227          
BLAST of Gvermi5116.t1 vs. uniprot
Match: F0ZHI4_DICPU (Uncharacterized protein n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F0ZHI4_DICPU)

HSP 1 Score: 140 bits (354), Expect = 1.120e-35
Identity = 79/237 (33.33%), Postives = 130/237 (54.85%), Query Frame = 0
Query:    1 MLIREYRIPFPATLAEYRIGMLYMISRATEEENRRCAGGQAVRVVTRRRFTDAQRGISGMYSEKHLQVRNLLPTFIKLLVPAHKCVLVERAWNAFPHYCLTTYESPFFGSAFQLSIQSRYIEGDAGGVHNALALSPRELAERHVVLLDLASE--EHVKMTRDTDVVRFHSKRAARAPLDAHGRWMTRAVPVMCCYKLVRLRVSIASLPSRRVEEWCHRHAVVRAFVHYNRQVLCWMD 235
            +LIREYRIP P T+ EY+I  LYM+++ ++      A G+ V ++  + ++D    ++G ++ K   + N LPT+++   P     + E+AWNA+P YC TTY+ P  G  F +SI++RY   D+G   N L L+  EL++R V  +D+A +  +  +   + D V F S +  R  L     W+    P+MC YK+ ++      + ++ VE +  R A+       +RQV CWMD
Sbjct:    2 VLIREYRIPLPITVDEYKIAQLYMVAKVSKNHT---ANGEGVEIIDNKPYSDG--ALNGQFTHKIFHLGNKLPTWLRSFAPT-SLQIEEKAWNAYP-YCKTTYQCPLLGDRFSISIETRYAP-DSGTQDNCLNLNSEELSQREVDFIDIAYDPIDEARYKTEEDPVVFKSSKTGRGRLQRD--WIGSTKPIMCSYKVCKVEFRYWGIQNK-VENFIQRSAIRDILFMGHRQVFCWMD 227          
BLAST of Gvermi5116.t1 vs. uniprot
Match: R7QST3_CHOCR (ADF-H domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QST3_CHOCR)

HSP 1 Score: 135 bits (340), Expect = 2.720e-35
Identity = 67/137 (48.91%), Postives = 96/137 (70.07%), Query Frame = 0
Query:  238 GIAISSKCTDAYAALNKREYGCLVLKIETD--SVVLEKTVPPFGDDPESAWKDFVKTLPESDARYLVTDFAWKETPTVTKSKVVMITWTPESSSVRSKMMYASSLEHVTSTLKVQKTIQTSEPEEVEYKELKNQIAK 372
            GIAI+ KC +AY AL+KREYG ++LKI  D   V ++K +PP   D E+ WK+ V  LPE+  RY+++DF+WKETPTVTKSK++MI W+ E + VR + +YA+S E V + + VQK+IQ  E E++ Y  +K  + K
Sbjct:    4 GIAIADKCVEAYKALSKREYGSIILKINDDMSEVGVDKCMPPSAGDLETEWKNLVSGLPENGCRYIISDFSWKETPTVTKSKIIMILWSAEYAPVRHRTVYAASKESVATKMAVQKSIQAVELEDIAYLAIKRDVTK 140          
BLAST of Gvermi5116.t1 vs. uniprot
Match: A0A8J4PQT1_9MYCE (Uncharacterized protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4PQT1_9MYCE)

HSP 1 Score: 138 bits (348), Expect = 7.220e-35
Identity = 79/237 (33.33%), Postives = 128/237 (54.01%), Query Frame = 0
Query:    1 MLIREYRIPFPATLAEYRIGMLYMISRATEEENRRCAGGQAVRVVTRRRFTDAQRGISGMYSEKHLQVRNLLPTFIKLLVPAHKCVLVERAWNAFPHYCLTTYESPFFGSAFQLSIQSRYIEGDAGGVHNALALSPRELAERHVVLLDLASE--EHVKMTRDTDVVRFHSKRAARAPLDAHGRWMTRAVPVMCCYKLVRLRVSIASLPSRRVEEWCHRHAVVRAFVHYNRQVLCWMD 235
            +L+REYRIP P ++ EYR+  LYM+++ ++      + G+ V ++  + + D    I+G ++ K   + + LPT+++ L PA    + E++WNA+P YC TTY+ P  G  F +SI++RY   D G   N L L P EL+ R V ++D+A +  +  +   + D   F S +  R  L       T   P+MC YK+ ++      + SR VE +  R A+       +RQV CWMD
Sbjct:    2 VLVREYRIPLPISVEEYRVAQLYMVAKVSKNHT---SNGEGVEIIENKPYIDG--AINGQFTHKIFHLSSRLPTWLRSLAPA-SLQIEEKSWNAYP-YCKTTYQCPLLGDRFSISIETRYAP-DGGVQDNCLKLQPEELSVREVDVVDIAYDPIDPTRYKIEEDPTIFKSVKTGRGQLQKDWFKNTTTSPIMCSYKVCKVEFRYWGVQSR-VENYIQRSAIRDILFMGHRQVFCWMD 229          
BLAST of Gvermi5116.t1 vs. uniprot
Match: A0A151ZGN7_9MYCE (Phosphatidylinositol transfer protein n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A151ZGN7_9MYCE)

HSP 1 Score: 138 bits (348), Expect = 7.590e-35
Identity = 81/237 (34.18%), Postives = 130/237 (54.85%), Query Frame = 0
Query:    1 MLIREYRIPFPATLAEYRIGMLYMISRATEEENRRCAGGQAVRVVTRRRFTDAQRGISGMYSEKHLQVRNLLPTFIKLLVPAHKCVLVERAWNAFPHYCLTTYESPFFGSAFQLSIQSRYIEGDAGGVHNALALSPRELAERHVVLLDLASE--EHVKMTRDTDVVRFHSKRAARAPLDAHGRWMTRAVPVMCCYKLVRLRVSIASLPSRRVEEWCHRHAVVRAFVHYNRQVLCWMD 235
            +LI+EYRIP P T+ EY+I  LYM+++ ++  +   + G+ V ++  + +TD     SG Y+ K   + N LP++++ + P+    + E+AWNA+P YC TTY  P  G  F +SI++RY + DAG   N L L+  +L  R V  +D+A +  +  K  ++ D   F S++  R  L     W     PVMC YK+ ++      L ++ VE +  R A+       +RQV CWMD
Sbjct:    2 VLIKEYRIPLPMTVEEYKIAQLYMVAKVSKNHS---SNGEGVEILENKPYTDG--ASSGQYTHKIFHILNKLPSWVRAICPS-SLQIDEKAWNAYP-YCKTTYSCPLLGEKFSISIETRYAQ-DAGTQDNCLGLTGDDLKLREVDFVDIAYDPIDPSKYKKEEDPTLFKSEKTGRGLLPKD--WFKSTSPVMCSYKVCKVEFRYWGLQTK-VENFIQRAAIRDILFMGHRQVFCWMD 227          
BLAST of Gvermi5116.t1 vs. uniprot
Match: A0A2V3J6Q4_9FLOR (Actin-depolymerizing factor 8 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6Q4_9FLOR)

HSP 1 Score: 131 bits (329), Expect = 1.130e-33
Identity = 64/137 (46.72%), Postives = 97/137 (70.80%), Query Frame = 0
Query:  238 GIAISSKCTDAYAALNKREYGCLVLKIE--TDSVVLEKTVPPFGDDPESAWKDFVKTLPESDARYLVTDFAWKETPTVTKSKVVMITWTPESSSVRSKMMYASSLEHVTSTLKVQKTIQTSEPEEVEYKELKNQIAK 372
            GIA+S KC DAY AL K EY  ++LKI    D + LE T      +PE  WKDFVK+LPE  ARY+++DF  KETPTV+K+K++++ W P+ + +RSK++YA+S+E +T+ ++ QK IQ ++ +++EY  +KN + K
Sbjct:    4 GIAVSDKCIDAYTALRKSEYSRVILKITDAADLIELESTHLRSAKEPEEDWKDFVKSLPEDSARYIISDFTVKETPTVSKAKILVLLWNPDGAPIRSKLLYAASVEALTAKVQPQKYIQATDTDDIEYSVVKNALFK 140          
BLAST of Gvermi5116.t1 vs. uniprot
Match: A0A1X6P6I6_PORUM (ADF-H domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P6I6_PORUM)

HSP 1 Score: 130 bits (328), Expect = 1.680e-33
Identity = 72/139 (51.80%), Postives = 96/139 (69.06%), Query Frame = 0
Query:  238 GIAISSKCTDAYAALNK-REYGCLVLKIETD--SVVLEKTVPPFGDDPESAWKDFVKTLPESDARYLVTDFAWKETPTVTKSKVVMITWTPESSSVRSKMMYASSLEHVTSTLK-VQKTIQTSEPEEVEYKELKNQIAK 372
            GIA++ KC   Y AL++ R +  ++LKI  D   VV++  +P    D E  WKDFVK LPESD RY+V DF WK+ PTVTKSK+ +I W+PE S VRSKM+YA+S E V S +  VQ+ +Q +E EE+EY  +KNQ+AK
Sbjct:    4 GIAVNDKCIQEYQALSRARTHRAVILKINDDMSEVVVDSILPKSQGDHEGDWKDFVKLLPESDCRYVVVDFEWKDQPTVTKSKICLILWSPEYSRVRSKMIYAASQEAVASKMADVQRQLQATELEELEYGVIKNQVAK 142          
BLAST of Gvermi5116.t1 vs. uniprot
Match: UPI0006D4FC67 (phosphatidylinositol transfer protein alpha isoform-like n=1 Tax=Halyomorpha halys TaxID=286706 RepID=UPI0006D4FC67)

HSP 1 Score: 135 bits (339), Expect = 2.320e-33
Identity = 87/243 (35.80%), Postives = 132/243 (54.32%), Query Frame = 0
Query:    1 MLIREYRIPFPATLAEYRIGMLYMISRATEEENRRCAGGQAVRVVTRRRFTDA----QRGISGMYSEKHLQVRNLLPTFIKLLVPAHKCVLVERAWNAFPHYCLTTYESP-FFGSAFQLSIQSRYIEGDAGGVHNALALSPRELAERHVVLLDLASEEHVK--MTRDTDVVRFHSKRAARAPLDAHGRWMTRAVPVMCCYKLVRLRVSIASLPSRRVEEWCHRHAVVRAFVHYNRQVLCWMDH 236
            MLI+EYRIP P TL EYR+G ++  +  ++ E +    G+ V  +T   FT       R  SG+YS K  ++ + LPTFI+LL  ++   + E +WNA+P YC T   +P +    F + I+S + E   G   NA  L P  L  R VV +D+ ++   K    +DTD  RF S +  R PL     W++ A P+M CYKLVR       L +R +E +  + +  + F+ ++RQV CW+D+
Sbjct:    1 MLIKEYRIPLPFTLEEYRVGQMFSTAELSKMETK---DGEGVEFITNEDFTGTPLFDNRFSSGVYSYKIYRIASRLPTFIRLLFDSNSMDIHEESWNAYP-YCRTIVTNPGYMKDNFSIIIESIH-ENGRGINENAHLLPPEVLERRSVVTIDIGNDPFTKGDYKKDTDPSRFVSVKTKRGPLK--DDWISNANPIMTCYKLVRAEFKWFGLQAR-IENFI-QESEQKLFLRFHRQVFCWIDN 234          
The following BLAST results are available for this feature:
BLAST of Gvermi5116.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J6M5_9FLOR1.460e-10056.32Phosphatidylinositol transfer protein 3 n=1 Tax=Gr... [more]
UPI000644DA981.090e-4337.97hypothetical protein n=1 Tax=Acytostelium subglobo... [more]
D3B5V9_POLPP4.200e-3835.86Phosphatidylinositol transfer protein n=1 Tax=Poly... [more]
F0ZHI4_DICPU1.120e-3533.33Uncharacterized protein n=1 Tax=Dictyostelium purp... [more]
R7QST3_CHOCR2.720e-3548.91ADF-H domain-containing protein n=1 Tax=Chondrus c... [more]
A0A8J4PQT1_9MYCE7.220e-3533.33Uncharacterized protein n=1 Tax=Polysphondylium vi... [more]
A0A151ZGN7_9MYCE7.590e-3534.18Phosphatidylinositol transfer protein n=1 Tax=Tieg... [more]
A0A2V3J6Q4_9FLOR1.130e-3346.72Actin-depolymerizing factor 8 n=1 Tax=Gracilariops... [more]
A0A1X6P6I6_PORUM1.680e-3351.80ADF-H domain-containing protein n=1 Tax=Porphyra u... [more]
UPI0006D4FC672.320e-3335.80phosphatidylinositol transfer protein alpha isofor... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002108Actin-depolymerising factor homology domainSMARTSM00102adf_2coord: 243..371
e-value: 5.9E-22
score: 88.9
IPR002108Actin-depolymerising factor homology domainPFAMPF00241Cofilin_ADFcoord: 245..368
e-value: 1.2E-23
score: 83.3
IPR002108Actin-depolymerising factor homology domainPROSITEPS51263ADF_Hcoord: 238..371
score: 25.222105
IPR029006ADF-H/Gelsolin-like domain superfamilyGENE3D3.40.20.10Severincoord: 237..372
e-value: 9.7E-31
score: 108.6
IPR023393START-like domain superfamilyGENE3D3.30.530.20coord: 1..236
e-value: 5.8E-60
score: 205.0
IPR001666Phosphatidylinositol transfer proteinPFAMPF02121IP_transcoord: 1..236
e-value: 5.8E-54
score: 183.3
IPR001666Phosphatidylinositol transfer proteinPANTHERPTHR10658PHOSPHATIDYLINOSITOL TRANSFER PROTEINcoord: 1..236
IPR017904ADF/CofilinCDDcd11286ADF_cofilin_likecoord: 238..367
e-value: 2.42659E-31
score: 113.806
NoneNo IPR availableSUPERFAMILY55961Bet v1-likecoord: 1..235
NoneNo IPR availableSUPERFAMILY55753Actin depolymerizing proteinscoord: 232..370

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24228contigScGOVlb_24228:321584..323480 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi5116.t1Gvermi5116.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24228 321584..323480 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi5116.t1 ID=Gvermi5116.t1|Name=Gvermi5116.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=373bp
MLIREYRIPFPATLAEYRIGMLYMISRATEEENRRCAGGQAVRVVTRRRF
TDAQRGISGMYSEKHLQVRNLLPTFIKLLVPAHKCVLVERAWNAFPHYCL
TTYESPFFGSAFQLSIQSRYIEGDAGGVHNALALSPRELAERHVVLLDLA
SEEHVKMTRDTDVVRFHSKRAARAPLDAHGRWMTRAVPVMCCYKLVRLRV
SIASLPSRRVEEWCHRHAVVRAFVHYNRQVLCWMDHCGIAISSKCTDAYA
ALNKREYGCLVLKIETDSVVLEKTVPPFGDDPESAWKDFVKTLPESDARY
LVTDFAWKETPTVTKSKVVMITWTPESSSVRSKMMYASSLEHVTSTLKVQ
KTIQTSEPEEVEYKELKNQIAK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002108ADF-H
IPR029006ADF-H/Gelsolin-like_dom_sf
IPR023393START-like_dom_sf
IPR001666PI_transfer
IPR017904ADF/Cofilin