Gvermi5115.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi5115.t1
Unique NameGvermi5115.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length86
Homology
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BLAST of Gvermi5115.t1 vs. uniprot
Match: A0A2V3J8Q2_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J8Q2_9FLOR)

HSP 1 Score: 129 bits (323), Expect = 2.640e-37
Identity = 63/85 (74.12%), Postives = 72/85 (84.71%), Query Frame = 0 
Query:    1 MSQSLCCFATCLAGALTMALFGMALRAHDPFLGFEGDFDEAAASCFRTALVFGGLSALSLLTFALGAVRSKMAPPAIPRAQYEAV 85
            MSQSLCC ATCLAG+LTM LFG++L+ H+PFLG+ GDFDEAAA+CF+TA VFGGLSALSL  F + AVRSKMAPP I R  YEAV
Sbjct:    1 MSQSLCCLATCLAGSLTMVLFGISLKGHNPFLGYTGDFDEAAAACFKTAFVFGGLSALSLGAFVMNAVRSKMAPPPIARLNYEAV 85
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BLAST of Gvermi5115.t1 vs. uniprot
Match: M2W0W9_GALSU (Uncharacterized protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2W0W9_GALSU)

HSP 1 Score: 68.2 bits (165), Expect = 3.080e-13
Identity = 31/68 (45.59%), Postives = 48/68 (70.59%), Query Frame = 0 
Query:    6 CCFATCLAGALTMALFGMALRAHDPFLGFEGDFDEAAASCFRTALVFGGLSALSLLTFALGAVRSKMA 73
            CCF T + G+LT+ +FG+ LR+H PFLGFEGD + AA+SCF  + +F   S LS++++ +G  + + A
Sbjct:   10 CCFLTSIMGSLTLLVFGLLLRSHYPFLGFEGDENAAASSCFWASFIFLITSILSIVSYGVGMFQERYA 77
The following BLAST results are available for this feature:
BLAST of Gvermi5115.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J8Q2_9FLOR2.640e-3774.12Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
M2W0W9_GALSU3.080e-1345.59Uncharacterized protein n=1 Tax=Galdieria sulphura... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..26
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..16
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 50..68
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..26
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 27..49
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 69..85
NoneNo IPR availableTMHMMTMhelixcoord: 47..69
NoneNo IPR availableTMHMMTMhelixcoord: 5..27

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24228contigScGOVlb_24228:320837..321192 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi5115.t1Gvermi5115.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24228 320837..321192 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi5115.t1 ID=Gvermi5115.t1|Name=Gvermi5115.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=86bp
MSQSLCCFATCLAGALTMALFGMALRAHDPFLGFEGDFDEAAASCFRTAL
VFGGLSALSLLTFALGAVRSKMAPPAIPRAQYEAV*
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