Gvermi5086.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gvermi5086.t1
Unique Name	Gvermi5086.t1
Type	polypeptide
Organism	Gracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length	214

Homology

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BLAST of Gvermi5086.t1 vs. uniprot
Match: A0A2V3ISA1_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ISA1_9FLOR)

HSP 1 Score: 169 bits (428), Expect = 1.720e-49
Identity = 106/215 (49.30%), Postives = 128/215 (59.53%), Query Frame = 0

Query:    1 MGSSLSTASRSVARQSSKRISASKPAAPSSPTQAQSLSESHQNITARVQKQQPIKDPVLYQRPTTDDWATALKQMSNVITSSSWD-ENQTSAQNSAS-GRHPAQRSSATAEKLPQQRSKMDADVDDAQLGRHGTTMKPKGRLSQVDVLELFRLRRQGSELWNEKSLSNKYKVDERDLADLLKFTRTYAGRLDNDGKVRAYYNPDPSNTIKRFEKD 213
            MGSSLST  +S +R   K +    PA   +P   +S    +  +TARV      + P LYQRPT  +WA ALK MSNVI SS+W  E Q    NS    RH AQRSS T  KLPQ+ + +   +    L          GRL+QV+VLELF LRR     W   +LS KY VDE D+ +LLK+TRTY GR+D+DGKVRAYYNPDP NTI RFE D
Sbjct:    1 MGSSLSTIPKSASRSVVKAV---PPAIKQAPKTNRSQVP-NSPVTARVSTPASTQQPELYQRPTAQEWAAALKNMSNVIQSSAWQGEVQPVHPNSPRLERHAAQRSSTTTRKLPQRSAPLHPGIRPVGLEVEHVRRSNAGRLTQVNVLELFNLRRDDPARWTAAALSAKYAVDESDVVNLLKYTRTYTGRIDSDGKVRAYYNPDPKNTISRFEND 211

The following BLAST results are available for this feature:

BLAST of Gvermi5086.t1 vs. uniprot

BLAST of Gvermi5086.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3ISA1_9FLOR	1.720e-49	49.30	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009622	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 4	PFAM	PF06784	UPF0240	coord: 16..186 e-value: 4.3E-9 score: 36.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..50
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 114..130
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..138
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 67..112

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
ScGOVlb_24228	contig	ScGOVlb_24228:93116..93757 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gvermi5086.t1	Gvermi5086.t1	Gracilaria vermiculophylla HapMaleFtJ_2017 male	mRNA	ScGOVlb_24228 93116..93757 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gvermi5086.t1 ID=Gvermi5086.t1|Name=Gvermi5086.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=214bp
MGSSLSTASRSVARQSSKRISASKPAAPSSPTQAQSLSESHQNITARVQK
QQPIKDPVLYQRPTTDDWATALKQMSNVITSSSWDENQTSAQNSASGRHP
AQRSSATAEKLPQQRSKMDADVDDAQLGRHGTTMKPKGRLSQVDVLELFR
LRRQGSELWNEKSLSNKYKVDERDLADLLKFTRTYAGRLDNDGKVRAYYN
PDPSNTIKRFEKD*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR009622	NDUFAF4