Gvermi5083.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi5083.t1
Unique NameGvermi5083.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length232
Homology
BLAST of Gvermi5083.t1 vs. uniprot
Match: A0A2V3J6K2_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6K2_9FLOR)

HSP 1 Score: 252 bits (644), Expect = 1.080e-81
Identity = 129/228 (56.58%), Postives = 165/228 (72.37%), Query Frame = 0
Query:    1 MAAIRYIAAARVPDRCCVAQHVGQSSDPLPPVLFQQKFDKILSSTQLQHNNRLTITDEHVGHIHYDADPAVMFLLITAPSYPQRIAFQVLAELRTQFDKQFGDQMAKATTGSLSKTCKPLFVQIIHKFQNPSGVDKISNVEHQVLQVKGMMHDNINAALNNTEKLETLLDISDNMKNEAFSFNRSTTQVKKRMQWKDLGMKLLIAFLVLLIVSFVVGSVVIRRRGHAD 228
            M  I+YIAAAR+PDRC  A+     S  +P  +F +K DK+L S+ L++N RLTITD+ +GHIHY+ADPA ++L++TA  YPQR AF++LA++R QFDK +  Q++ A T  LSKT +PLF +   K+Q+P+  DKI+NVE QV QVKGMM DNI AAL NTE LETLLDISDNMKNEA SFNRST  VKKRMQWK+L MK+LI          V GS ++RR+   +
Sbjct:    1 MTTIKYIAAARIPDRCRFAEFTLLESREIPRAVFDEKLDKVLVSSHLKNNTRLTITDD-IGHIHYEADPAFIYLVVTAADYPQRTAFRLLADVRAQFDKSYSRQISHAKTSELSKTARPLFAEFADKYQDPAQFDKIANVEQQVDQVKGMMRDNIEAALKNTENLETLLDISDNMKNEASSFNRSTQDVKKRMQWKNLKMKILIXXXXXXXXGVVAGSFIVRRKRQQE 227          
BLAST of Gvermi5083.t1 vs. uniprot
Match: A0A2V3J4P9_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J4P9_9FLOR)

HSP 1 Score: 182 bits (463), Expect = 2.700e-54
Identity = 95/217 (43.78%), Postives = 136/217 (62.67%), Query Frame = 0
Query:    4 IRYIAAARVPDRCCVAQHVGQSSDPLPPVLFQQKFDKILSSTQLQHNNRLTITDEHVGHIHYDADPAVMFLLITAPSYPQRIAFQVLAELRTQFDKQFGDQMAKATTGSLSKTCKPLFVQIIHKFQNPSGVDKISNVEHQVLQVKGMMHDNINAALNNTEKLETLLDISDNMKNEAFSFNRSTTQVKKRMQWKDLGMKLLIAFLVLLIVSFVVGSVV 220
            +R++A AR+ DR  +AQ+    S  LP  LF  K DK+L S ++  + RLTITD  VG IHYD+DP  ++L++ A  Y QR AF+ L ELR +FD+ F   +A A   SLS++ K +  Q+  K+ +   VDK+++V  QV +VKG M +NI + L N E +ETLLD SD MKNEA  F RS  + K +M WK+    + I  LVL+I + ++G +V
Sbjct:    7 VRFVAVARLVDRVPIAQYSATPSRQLPAKLFHDKLDKVLHSARIGEHTRLTITDREVGSIHYDSDPVCLYLVVCARDYQQRTAFRFLGELRNEFDQTFRTDVAGARHSSLSRSAKQMLAQLCDKYNHARNVDKVASVTLQVEEVKGAMQNNIESVLRNQENIETLLDQSDTMKNEATGFQRSAHRAKDKMWWKNTKWTIAIILLVLIIAAAIIGGIV 223          
BLAST of Gvermi5083.t1 vs. uniprot
Match: R7QHV8_CHOCR (VAMP7b n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QHV8_CHOCR)

HSP 1 Score: 169 bits (428), Expect = 5.600e-49
Identity = 91/207 (43.96%), Postives = 134/207 (64.73%), Query Frame = 0
Query:    1 MAAIRYIAAARVPDR-----CCVAQHVGQSSDPLPPVLFQQKFDKILSSTQLQHNNRLTITDEHVGHIHYDADPAVMFLLITAPSYPQRIAFQVLAELRTQFDKQFGDQMAKATTGSLSKTCKPLFVQIIHKFQNPSGVDKISNVEHQVLQVKGMMHDNINAALNNTEKLETLLDISDNMKNEAFSFNRSTTQVKKRMQWKDLGMKL 202
            MA + Y+  ARVPD+     C       QS   L  +L      ++L S ++  ++RLTI D+ VG+IHY ADPA+++L+ITA +YPQR AF++L+E R +F+++F  ++A      ++K  KP   +++ ++++ +  DKIS+V  QV QVKG+M  NI AAL N E LETLLD SD M+NEA +FNRST   K+RM+WK L M +
Sbjct:    1 MANVVYMGIARVPDKQILVSCVATDSREQSKQQLDSIL-----SRVLVSGRIDEHDRLTIADKDVGNIHYSADPALVYLVITATNYPQRTAFKLLSEARAEFEQEFKTELAGGKNDGVAKVAKPFLKRMMDRYEDVAREDKISSVALQVDQVKGLMQTNIQAALKNQENLETLLDSSDTMRNEASTFNRSTKDAKERMRWKSLKMNI 202          
BLAST of Gvermi5083.t1 vs. uniprot
Match: R7Q3S3_CHOCR (VAMP7a n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q3S3_CHOCR)

HSP 1 Score: 168 bits (426), Expect = 9.660e-49
Identity = 86/201 (42.79%), Postives = 125/201 (62.19%), Query Frame = 0
Query:    4 IRYIAAARVPDRCCVAQHVGQSSDPLPPVLFQQKFDKILSSTQLQHNNRLTITDEHVGHIHYDADPAVMFLLITAPSYPQRIAFQVLAELRTQFDKQFGDQMAKATTGSLSKTCKPLFVQIIHKFQNPSGVDKISNVEHQVLQVKGMMHDNINAALNNTEKLETLLDISDNMKNEAFSFNRSTTQVKKRMQWKDLGMKLLI 204
            IRY+A AR+ DR  VA++    S  +P  L  +K +K+L S +++ + RLTITD  VG IHYD+DP  ++L++ A  Y QR AF+ L E+R +FD  FG+ +  A    LS+  K L   +  K+ +   VDK++ V  QV +VKG+M +NI   L N E +ETLLD +D MKNEA  F RS  + K +M WK+  M+++I
Sbjct:    7 IRYVAVARLTDRVPVAEYAAIDSREVPTKLLDEKLEKVLRSGRVEEHTRLTITDREVGSIHYDSDPVCLYLVVCAREYQQRNAFKFLGEVRREFDASFGNDVQTARQSGLSRPAKELLRSLCEKYNSVQNVDKVAAVSLQVEEVKGVMQNNIQNVLRNQENIETLLDQTDTMKNEATGFQRSANRAKDKMWWKNTKMQIII 207          
BLAST of Gvermi5083.t1 vs. uniprot
Match: A0A5J4YUM8_PORPP (Vesicle-associated membrane protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YUM8_PORPP)

HSP 1 Score: 140 bits (354), Expect = 2.220e-37
Identity = 73/189 (38.62%), Postives = 116/189 (61.38%), Query Frame = 0
Query:    4 IRYIAAARVPDRCCVAQHVGQSSDPLPPVLFQQKFDKILSSTQLQHNNRLTITDEHVGHIHYDADPAVMFLLITAPSYPQRIAFQVLAELRTQFDKQFGDQMAKATTGSLSKTCKPLFVQIIHKFQNPSGVDKISNVEHQVLQVKGMMHDNINAALNNTEKLETLLDISDNMKNEAFSFNRSTTQVKKR 192
            +R++A AR+ DR  +  +   S     P L + KF K+L+S ++  + RLT+TD  VG IH++ DP  +++ +  PSYPQR AFQ+L E R +F  +FG  +  A  G ++K+ K +    +  +     VD++  V++QV +VKG+M +NI  ALNN E L+TL+D +D M+NEA +F RS+   K +
Sbjct:    6 VRFLAVARLQDRVPLLWYCSASD----PELHEGKFRKLLASGRVAEHARLTVTDRDVGTIHFECDPVCVYMTMCDPSYPQRTAFQLLTEFRDEFSAEFGPAVRGARDGEMNKSGKRMVKAFMETYDQARNVDQLEGVKYQVDEVKGVMENNIQQALNNQENLDTLVDKTDVMRNEASNFQRSSQAAKNK 190          
BLAST of Gvermi5083.t1 vs. uniprot
Match: A0A7V5I7K9_9BACT (Uncharacterized protein n=2 Tax=cellular organisms TaxID=131567 RepID=A0A7V5I7K9_9BACT)

HSP 1 Score: 134 bits (336), Expect = 6.410e-35
Identity = 75/204 (36.76%), Postives = 117/204 (57.35%), Query Frame = 0
Query:    6 YIAAARVPDRCCVAQH------VGQSSDPLPPVLFQQKFDKILSSTQLQHNNRLTITDEHVGHIHYDADPAVMFLLITAPSYPQRIAFQVLAELRTQFDKQFG---DQMAKATTGSLSKTCKPLFVQIIHKFQNPSGVDKISNVEHQVLQVKGMMHDNINAALNNTEKLETLLDISDNMKNEAFSFNRSTTQVKKRMQWKDLGM 200
            Y A  R  DR  +A++      V  +        F +   +IL S ++  + RLTI ++ +G IHYD D   M+++    SYPQR+AFQ L ELR++F +  G   + +A AT  SL+K C+PL  ++   +  PSG+DK+S +  QV +VKG M DNI+  + NT+ LE L   S+ ++ EA +F+RS   V+++  WK+  M
Sbjct:   18 YCAICRWEDRVVLARYAAPRAGVALAETGASTAAFAETLRRILQSKKIAEHKRLTIEEKQLGMIHYDNDGTCMYVVFCRASYPQRLAFQFLNELRSEFLRTVGSRPEDVASATENSLTKLCRPLMSELCTLYDTPSGLDKMSRIRMQVEEVKGHMQDNIHQVMKNTDDLEQLQTQSEGLRGEASAFHRSAGTVERKYWWKNARM 221          
BLAST of Gvermi5083.t1 vs. uniprot
Match: A0A7J7IET1_9RHOD (Uncharacterized protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IET1_9RHOD)

HSP 1 Score: 129 bits (325), Expect = 2.700e-33
Identity = 74/209 (35.41%), Postives = 120/209 (57.42%), Query Frame = 0
Query:    6 YIAAARVPDRCCVAQH------VGQSSDPLPPVLFQQKFDKILSSTQLQHNNRLTITDEHVGHIHYDADPAVMFLLITAPSYPQRIAFQVLAELRTQFDKQFGDQ---MAKATTGSLSKTCKPLFVQIIHKFQNPSGVDKISNVEHQVLQVKGMMHDNINAALNNTEKLETLLDISDNMKNEAFSFNRSTTQVKKRMQWKDLGMKLLIA 205
            Y A  R  DR  +A++      V  +        F +   +IL S ++  + RLTI ++ +G IHYD D   M+++ +  SYPQR+AFQ L+ELR +F +  G++   +A A+   L+K C+PL  ++   +  PSG+DK+S +  QV +VKG M +NI   + NT+ LE L   S+ ++ EA +F+RS   V+++  WK+  M  +IA
Sbjct:   18 YCAICRWEDRVVLARYAAPRAGVALAETGASTAAFGETLIRILQSKKIAEHKRLTIEEKQLGMIHYDNDGTCMYVVFSRASYPQRLAFQFLSELRAEFLRTVGNRAEDVATASENGLTKLCRPLMSELCTLYDKPSGLDKMSRIRMQVEEVKGHMQNNIQEVMKNTDDLEQLQTQSEGLRGEASAFHRSAGTVERKYWWKNARMICVIA 226          
BLAST of Gvermi5083.t1 vs. uniprot
Match: F0W8S1_9STRA (Uncharacterized protein AlNc14C36G3196 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W8S1_9STRA)

HSP 1 Score: 99.4 bits (246), Expect = 2.020e-21
Identity = 67/232 (28.88%), Postives = 119/232 (51.29%), Query Frame = 0
Query:    4 IRYIAAARVPDR---CCVAQHVGQSS--DPLPPVLFQQKFDKILSS----TQLQHNNRLTIT-DEHVGHIHYDADPAVMFLLITAPSYPQRIAFQVLAELRTQFDKQFGDQMAKATTGSLSKTCKPLFVQIIHKFQNPSGVDKISNVEHQVLQVKGMMHDNINAALNNTEKLETLLDISDNMKNEAFSFNRSTTQVKKRMQWKDLGMKLLIAFLVLLIVSFVVGSVVIRRRG 225
            I++I  AR  D+   CC       S+  D      +++ + K+L +    TQ+  N R ++  D +  H     D  V F +IT  SYP R+AFQ++  L+ +F  +F  +        L K CK +   + +++ + + VDKIS V HQV  VK +MH NI   L+NTEK+E +   ++++  +A  F  S  +++K M WK++ + + I    +L++  ++    + + G
Sbjct:   43 IKFIGVARATDKAIICCYFHSAKASTNVDLAECAKWKEMYAKVLRAPTWKTQVTPNARHSLDCDPNKFHFSMSNDELV-FAVITVKSYPIRLAFQLIQTLQQEFVPKFATKALNCREHGLDKECKSMMQTLANQYDDRTKVDKISEVLHQVDNVKSVMHTNIQVVLSNTEKMEVVEQKTNDLSEQAKVFRNSGRKLRKAMWWKNVKLTIAIGLCAILVIVIILAVSGVFKSG 273          
BLAST of Gvermi5083.t1 vs. uniprot
Match: A0A0L0DLR9_THETB (Synaptobrevin n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DLR9_THETB)

HSP 1 Score: 97.1 bits (240), Expect = 4.670e-21
Identity = 59/161 (36.65%), Postives = 90/161 (55.90%), Query Frame = 0
Query:   62 HIHYDADPAVMFLLITAPSYPQRIAFQVLAELRTQFDKQFGDQMAK-ATTGSLSKTCKPLFVQIIHKFQNPSGVDKISNVEHQVLQVKGMMHDNINAALNNTEKLETLLDISDNMKNEAFSFNRSTTQVKKRMQWKDLGMKLLI----AFLVLLIVSFVVG 217
            H HY     ++FL +     P+RI F  LA++ ++F+ QF   +A+ A   SL    KP     I  + +    DKIS V+ Q+  VKG+M DNI   L   EK+E L+D +DN+  +AF F + +T +K+ M WK++ M +LI    A ++ LI+SF  G
Sbjct:   51 HFHYVTHNGLVFLAMAEADTPRRIPFAFLADVISRFEAQFDAGVARRAIAYSLDSAFKPTLSSRIDYYNHDPSADKISAVQSQIDDVKGVMVDNIEKVLERGEKIELLVDKTDNLSAQAFQFKKKSTSLKRAMMWKNIKMWILIGMVLAIVLWLILSFACG 211          
BLAST of Gvermi5083.t1 vs. uniprot
Match: A0A812Q114_SYMMI (VAMP726 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812Q114_SYMMI)

HSP 1 Score: 95.5 bits (236), Expect = 2.880e-20
Identity = 53/149 (35.57%), Postives = 90/149 (60.40%), Query Frame = 0
Query:   72 MFLLITAPSYPQRIAFQVLAELRTQFDKQFGDQ-MAKATTGSLSKTCKPLFVQIIHKFQNPSGVDKISNVEHQVLQVKGMMHDNINAALNNTEKLETLLDISDNMKNEAFSFNRSTTQVKKRMQWKDLGMKLLIAFLVLLIVSFVVGSV 219
            +FL+I    YPQR A   L E +T F  +F    +A A   +LSK+ K  F ++  K+ NP  VD I++ + +V  VK +M DN++ AL N  KLE++   +++++++A  F R   ++KKRM WK+L  KL++  ++L I+  ++G +
Sbjct:   86 IFLVICKTDYPQRCAILCLEECKTTFTSKFPPTTIASAKENALSKSFKDQFRKLCIKYNNPGDVDAIASAKRKVESVKLVMQDNVDLALQNCVKLESIEKAAEDLQSQAGLFKRDARELKKRMWWKNLKWKLIVGGVILAILGIIIGII 234          
The following BLAST results are available for this feature:
BLAST of Gvermi5083.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J6K2_9FLOR1.080e-8156.58Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3J4P9_9FLOR2.700e-5443.78Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QHV8_CHOCR5.600e-4943.96VAMP7b n=1 Tax=Chondrus crispus TaxID=2769 RepID=R... [more]
R7Q3S3_CHOCR9.660e-4942.79VAMP7a n=1 Tax=Chondrus crispus TaxID=2769 RepID=R... [more]
A0A5J4YUM8_PORPP2.220e-3738.62Vesicle-associated membrane protein n=1 Tax=Porphy... [more]
A0A7V5I7K9_9BACT6.410e-3536.76Uncharacterized protein n=2 Tax=cellular organisms... [more]
A0A7J7IET1_9RHOD2.700e-3335.41Uncharacterized protein n=1 Tax=Cyanidiococcus yan... [more]
F0W8S1_9STRA2.020e-2128.88Uncharacterized protein AlNc14C36G3196 n=1 Tax=Alb... [more]
A0A0L0DLR9_THETB4.670e-2136.65Synaptobrevin n=1 Tax=Thecamonas trahens ATCC 5006... [more]
A0A812Q114_SYMMI2.880e-2035.57VAMP726 protein n=1 Tax=Symbiodinium microadriatic... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001388SynaptobrevinPRINTSPR00219SYNAPTOBREVNcoord: 161..180
score: 29.19
coord: 141..160
score: 31.22
coord: 197..216
score: 18.38
IPR010908Longin domainSMARTSM01270Longin_2coord: 37..120
e-value: 3.0E-8
score: 43.4
IPR010908Longin domainPFAMPF13774Longincoord: 41..108
e-value: 5.7E-12
score: 45.5
IPR010908Longin domainPROSITEPS50859LONGINcoord: 56..125
score: 12.178334
IPR010908Longin domainCDDcd14824Longincoord: 40..128
e-value: 8.73537E-14
score: 63.8141
NoneNo IPR availableGENE3D3.30.450.50Longin domaincoord: 1..130
e-value: 1.3E-14
score: 56.0
NoneNo IPR availableGENE3D1.20.5.110coord: 132..220
e-value: 3.0E-20
score: 73.7
NoneNo IPR availablePANTHERPTHR21136:SF168VESICLE-ASSOCIATED MEMBRANE PROTEIN 9coord: 37..217
NoneNo IPR availablePANTHERPTHR21136SNARE PROTEINScoord: 37..217
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 222..231
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 202..221
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..201
NoneNo IPR availableCDDcd15843R-SNAREcoord: 135..193
e-value: 1.58073E-15
score: 66.7567
NoneNo IPR availableSUPERFAMILY58038SNARE fusion complexcoord: 130..197
NoneNo IPR availableTMHMMTMhelixcoord: 202..221
IPR042855v-SNARE, coiled-coil homology domainPFAMPF00957Synaptobrevincoord: 134..219
e-value: 2.3E-20
score: 72.1
IPR042855v-SNARE, coiled-coil homology domainPROSITEPS50892V_SNAREcoord: 136..196
score: 12.68915
IPR011012Longin-like domain superfamilySUPERFAMILY64356SNARE-likecoord: 36..136

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24228contigScGOVlb_24228:87094..87959 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi5083.t1Gvermi5083.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24228 87094..87959 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi5083.t1 ID=Gvermi5083.t1|Name=Gvermi5083.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=232bp
MAAIRYIAAARVPDRCCVAQHVGQSSDPLPPVLFQQKFDKILSSTQLQHN
NRLTITDEHVGHIHYDADPAVMFLLITAPSYPQRIAFQVLAELRTQFDKQ
FGDQMAKATTGSLSKTCKPLFVQIIHKFQNPSGVDKISNVEHQVLQVKGM
MHDNINAALNNTEKLETLLDISDNMKNEAFSFNRSTTQVKKRMQWKDLGM
KLLIAFLVLLIVSFVVGSVVIRRRGHADQTT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001388Synaptobrevin
IPR010908Longin_dom
IPR042855V_SNARE_CC
IPR011012Longin-like_dom_sf