Gvermi4993.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi4993.t1
Unique NameGvermi4993.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length132
Homology
BLAST of Gvermi4993.t1 vs. uniprot
Match: B7GAR4_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7GAR4_PHATC)

HSP 1 Score: 122 bits (307), Expect = 1.650e-32
Identity = 58/129 (44.96%), Postives = 90/129 (69.77%), Query Frame = 0
Query:    1 MGALMGKQVSLNAQSGVAYFAYRKFVVVVEVPTENSGVLFIYTCVCRLYVDSSSSGSSDHRQDAAVLKRAMELNYMEHLTRGATLGLDDKEVNMCYSTPIQGLTFADMKAAMEAFLVTCGQVNEQLDAA 129
            MG +MG+ +SLN + G+AYF +++F++VVEVP +N GV F+YT VC+L  D +           A+++ AMELNYM+  TRGATLGL+  E+N+C+S P+ GL+F D+++ ++ F  T  +VN +L+ A
Sbjct:   83 MGNIMGRDLSLNTE-GMAYFPFQRFIIVVEVPEDNPGVCFVYTMVCQLQKDDNH---------LAIMRLAMELNYMQTGTRGATLGLEGDEINLCFSIPVCGLSFGDLQSVLQDFTGTAAEVNARLETA 201          
BLAST of Gvermi4993.t1 vs. uniprot
Match: A0A7S2VCA3_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2VCA3_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 7.950e-20
Identity = 43/90 (47.78%), Postives = 61/90 (67.78%), Query Frame = 0
Query:   40 FIYTCVCRLYVDSSSSGSSDHRQDAAVLKRAMELNYMEHLTRGATLGLDDKEVNMCYSTPIQGLTFADMKAAMEAFLVTCGQVNEQLDAA 129
            ++YTCVC+L  +   S   +     A+++ AMELNYM+H TRGATLG++  EVN+CYSTPI  L+ A +K  M+ FL T  +V+ QL+ A
Sbjct:    1 YMYTCVCKLETEDQGSRPQNLM---AIMQVAMELNYMQHRTRGATLGMEQSEVNLCYSTPIASLSPAGLKQVMDDFLTTTTEVHAQLERA 87          
BLAST of Gvermi4993.t1 vs. uniprot
Match: A0A2E6M1E5_9GAMM (Uncharacterized protein n=2 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A2E6M1E5_9GAMM)

HSP 1 Score: 60.8 bits (146), Expect = 8.900e-9
Identity = 41/130 (31.54%), Postives = 69/130 (53.08%), Query Frame = 0
Query:    1 MGALMGKQVSLNAQSGVAYFAYRKFVVVVEVPTENSGVLFIYTCVCRLYVDSSSSGSSDHRQDAAVLKRAMELNYMEHLTRGATLGLD--DKEVNMCYSTPIQGLTFADMKAAMEAFLVTCGQVNEQLDA 128
            +GA +GK + LN Q G++ F Y    +V+EVP E     F+YT +  L       G S  + + A++K+ ++LNY++  TRG  + LD  + EV   YS  +  +   D +  +E F+ T   + + +DA
Sbjct:   16 IGASVGKNIRLNDQ-GISAFTYEDLTIVIEVP-ETIPSFFVYTKLTSL-------GQS--KNENALMKKLLQLNYLQQETRGGCISLDPMNDEVMFSYSDRVAEVQATDFRNILENFIDTALTLVKAVDA 134          
The following BLAST results are available for this feature:
BLAST of Gvermi4993.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
B7GAR4_PHATC1.650e-3244.96Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]
A0A7S2VCA3_9STRA7.950e-2047.78Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]
A0A2E6M1E5_9GAMM8.900e-931.54Uncharacterized protein n=2 Tax=Gammaproteobacteri... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010261Tir chaperone protein (CesT) familyPFAMPF05932CesTcoord: 57..119
e-value: 1.3E-6
score: 28.6
NoneNo IPR availableGENE3D3.30.1460.10coord: 2..129
e-value: 3.3E-11
score: 45.3
NoneNo IPR availableSUPERFAMILY69635Type III secretory system chaperone-likecoord: 14..116

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_1078contigScGOVlb_1078:982..1377 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi4993.t1Gvermi4993.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_1078 982..1377 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi4993.t1 ID=Gvermi4993.t1|Name=Gvermi4993.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=132bp
MGALMGKQVSLNAQSGVAYFAYRKFVVVVEVPTENSGVLFIYTCVCRLYV
DSSSSGSSDHRQDAAVLKRAMELNYMEHLTRGATLGLDDKEVNMCYSTPI
QGLTFADMKAAMEAFLVTCGQVNEQLDAALV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010261Tir_chaperone