Gvermi4387.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gvermi4387.t1
Unique Name	Gvermi4387.t1
Type	polypeptide
Organism	Gracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length	289

Homology

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BLAST of Gvermi4387.t1 vs. uniprot
Match: A0A2V3J1P2_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J1P2_9FLOR)

HSP 1 Score: 221 bits (564), Expect = 2.600e-67
Identity = 119/287 (41.46%), Postives = 162/287 (56.45%), Query Frame = 0

Query:    7 LLLASVLSVVQARAFWGATYSDGFGNGLG-SMLSVRPSSRIVEG--KMSTIKFSAYGKATLYVNGKEYKTVLSTTPVIVKLLLKKSDLVAFRAEKTGKKAGLMATISWGSKTYITGKDRFTARGDYGRWEAAEQREWNSVVTYERRSQGTTRTFCHWDRADTTTIDADKFDDRASFIWRLSSEKNA----PVDTTYFRFVVGGENCGVTPEKSEKNKESEKTEKTKDDDAASSHRVPEPKERETLDSSYAIGGQNDGLSSEGFCACRYTDSRGGDCFDMDDPTSSAG 286
            L++A+VLSV  ARAFW  +  D   N    S +S+    R ++   K +TIKFSAY   TL+VNGK     + ++P  V + LKK D+VAF A K G+  G+M T+ W  K Y +G  RFTA GDY +W   +Q  WN   +Y  +  GT RTFCHWDRAD   I  DKFD +AS++WRL+ + N     P DT + R V+GGENCGV+P K E NK S++ E ++                   D      GQ+     +GFC C+ T+  GG+C+DMDD ++  G
Sbjct:   10 LVIAAVLSVGSARAFWNTSQGDRNNNWFWPSWVSLTHILRAIDKDHKPATIKFSAYADTTLFVNGKSLGRTIISSPTTVNVDLKKGDVVAFMARKIGENPGVMVTVDWDGKMYRSGHSRFTANGDYEQWTEEDQENWNLASSYRHKESGTLRTFCHWDRADDMDIKTDKFDLKASYVWRLAPKDNKKEEKPTDTVFLRLVIGGENCGVSPGKDESNKPSQRAEDSE------------------KDKKITFDGQSSDSDFQGFCVCKLTNRSGGECYDMDDDSAKEG 278

The following BLAST results are available for this feature:

BLAST of Gvermi4387.t1 vs. uniprot

BLAST of Gvermi4387.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3J1P2_9FLOR	2.600e-67	41.46	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 209..244
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 209..253
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 14..18
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..2
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..18
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 19..288
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 3..13

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
ScGOVlb_147	contig	ScGOVlb_147:1504971..1505993 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gvermi4387.t1	Gvermi4387.t1	Gracilaria vermiculophylla HapMaleFtJ_2017 male	mRNA	ScGOVlb_147 1504971..1505993 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gvermi4387.t1 ID=Gvermi4387.t1|Name=Gvermi4387.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=289bp
MTGVFVLLLASVLSVVQARAFWGATYSDGFGNGLGSMLSVRPSSRIVEGK
MSTIKFSAYGKATLYVNGKEYKTVLSTTPVIVKLLLKKSDLVAFRAEKTG
KKAGLMATISWGSKTYITGKDRFTARGDYGRWEAAEQREWNSVVTYERRS
QGTTRTFCHWDRADTTTIDADKFDDRASFIWRLSSEKNAPVDTTYFRFVV
GGENCGVTPEKSEKNKESEKTEKTKDDDAASSHRVPEPKERETLDSSYAI
GGQNDGLSSEGFCACRYTDSRGGDCFDMDDPTSSAGKW*