Gvermi4385.t2 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi4385.t2
Unique NameGvermi4385.t2
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length1078
Homology
BLAST of Gvermi4385.t2 vs. uniprot
Match: A0A2V3IIL4_9FLOR (DRBM domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IIL4_9FLOR)

HSP 1 Score: 502 bits (1292), Expect = 1.020e-156
Identity = 253/495 (51.11%), Postives = 349/495 (70.51%), Query Frame = 0
Query:  582 IEVDEIPCDDEEDGVDYVSRLIQIQQKKKFLSLPVPLFFPVQAKDGGGAGWKCVMTAKLLNKSPPEVIETTKVARNQKRAKRAAAKELLSSLESRVPELFQAESNGKPTGQAVKSQSALNAISVLVRDGHLPCMPNMETEEVNDTDEDRWRCSATLFTNDHGRKIFVEYGPSKSSAKQKWARKALETLIALKASGAEQYRCFVDPVRATKKKTMASVPKASELIVRTSDDERSSASCDDIVEDMDFSLELPSDYELVVAKTDADCERWFDVFAQPGAKLGVFIDSKSARLSVDENYSLENDCGSGKVKLPIICFSTASSCIVIRIDNKKELQNESGIYHVP-GTFWVPESAAEAFEDPRVQKAVLEGDDGLDLLTMDHGIQCATVQDVAVSSLAIAGYGKVSGSGHLSSLRDLTKYWMRKEAKDVSWEGIWPGKRHLVEKWLSQDSQGAAIAVLCAYATFCIREKVGDAARLKRINSPGAPNDLDVLSRRIVEVG 1075
            IEVDEIP ++++D  D+VSRL +I QK+KF++L  P +  V+ + GGG+GW C M A +L KSP EV+E   VARN+ RAKRAAAKE+L  L+S++PE F +E+ GK T Q V+  SA+NA+  L ++G+LPC P  + EEVN+  E+ WRC+ TLFT DH  K+FVEYGPSK++AKQK ARKALE +I LK+ GA+Q++  + P      KTMA++P ASE+I +T DDE S  SCDD+VE     LELP+DYELV+A+T++DC  WF   AQPGA+LG++IDS++AR SV     LE +    ++K P++CFS+A++ IV+R+D ++   +  G+  V   TFWVP+  A+  ED RV+KA L  D+GLD L   HGIQ   VQDVA++S+AIAG G+  G    SSLR LTKYWMR+E KD++W+ +WP +  L +  L  D++  A AVL A+A  C+R K+ DAAR+KR+N  GA NDL VL +R+++ G
Sbjct:  562 IEVDEIPYEEDDDAEDHVSRLNEIPQKRKFIALARPQWQMVRVRSGGGSGWMCTMKATVLRKSPQEVVECVSVARNKNRAKRAAAKEMLLKLKSKLPEAFLSENQGKQTNQPVRMHSAVNALHQLAQEGNLPCQPGYDVEEVNEAGENHWRCTTTLFTRDHDSKVFVEYGPSKNAAKQKGARKALEAIIKLKSPGADQFQKLLLPAEIQPTKTMANIPGASEVIFQTGDDEMSHGSCDDLVEGTGLRLELPTDYELVIAETESDCLNWFSAHAQPGARLGIYIDSETARDSVFRVSELEGN-KEYEIKFPMLCFSSANAGIVVRVDKRESSPDAGGLSQVEENTFWVPDIVADTLEDARVEKAALACDEGLDELFERHGIQADGVQDVALTSIAIAGLGRFDGRRQFSSLRQLTKYWMRQEVKDINWQTLWPKRSELPKALLGTDAKELAAAVLSAFAVRCVRVKLSDAARMKRVNMGGASNDLVVLCKRVLDSG 1055          
BLAST of Gvermi4385.t2 vs. uniprot
Match: A0A2V3IU14_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IU14_9FLOR)

HSP 1 Score: 186 bits (472), Expect = 1.450e-50
Identity = 92/161 (57.14%), Postives = 116/161 (72.05%), Query Frame = 0
Query:  911 ELQNESGIYHVPGTFWVPESAAEAFEDPRVQKAVLEGDDGLDLLTMDHGIQCATVQDVAVSSLAIAGYGKVSGSGHLSSLRDLTKYWMRKEAKDVSWEGIWPGKRHLVEKWLSQDSQGAAIAVLCAYATFCIREKVGDAARLKRINSPGAPNDLDVLSRRI 1071
            E +N+S   HV  TFWVP+ A +  ED RVQKA + GD  LDLL   HGIQC ++ + +VSSLAIAGYG+V  S +LS+L +LT+ WMR+EA+ +SWE IWP K  LVEKWL  D +  A+ VL AYATFC+REK+ DAAR+KR N+PGA N L V S R+
Sbjct:   17 EAENDSNFDHVHHTFWVPKVATKVLEDSRVQKAAIAGDYWLDLLFEHHGIQCESIHEFSVSSLAIAGYGRVDDSQNLSTLTELTEEWMRQEARAISWEEIWPKKHLLVEKWLGGDDKEVALGVLSAYATFCVREKLCDAARMKRRNNPGAVNGLHVFSTRM 177          
BLAST of Gvermi4385.t2 vs. uniprot
Match: A0A2V3J3V8_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J3V8_9FLOR)

HSP 1 Score: 128 bits (322), Expect = 4.480e-31
Identity = 61/108 (56.48%), Postives = 80/108 (74.07%), Query Frame = 0
Query:  911 ELQNESGIYHVPGTFWVPESAAEAFEDPRVQKAVLEGDDGLDLLTMDHGIQCATVQDVAVSSLAIAGYGKVSGSGHLSSLRDLTKYWMRKEAKDVSWEGIWPGKRHLV 1018
            + +N+S + HV   FWVPE AA+  ED RVQKA + G D  DLL   HGIQC ++ DV+VSSLA+AGYG+V  S +LS+  +LT+YWMRKEA+ +SWE IWP K+HL+
Sbjct:   17 DAENDSNLDHVQDKFWVPEVAAKVLEDSRVQKAAIAGVDWFDLLFEHHGIQCESIHDVSVSSLAVAGYGRVGDSQNLSNSTELTEYWMRKEARAISWEEIWP-KKHLL 123          
The following BLAST results are available for this feature:
BLAST of Gvermi4385.t2 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3IIL4_9FLOR1.020e-15651.11DRBM domain-containing protein n=1 Tax=Gracilariop... [more]
A0A2V3IU14_9FLOR1.450e-5057.14Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3J3V8_9FLOR4.480e-3156.48Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 656..676
NoneNo IPR availableGENE3D3.30.160.20coord: 578..684
e-value: 3.1E-6
score: 29.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 126..181
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 55..72
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 12..27
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 299..313
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 78..110
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 507..521
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..313
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 528..545
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 213..227
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 546..566
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 500..585
NoneNo IPR availableCDDcd00048DSRM_SFcoord: 715..766
e-value: 0.0043751
score: 34.568

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_147contigScGOVlb_147:1461529..1464762 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi4385.t2Gvermi4385.t2Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_147 1461529..1464762 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi4385.t2 ID=Gvermi4385.t2|Name=Gvermi4385.t2|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=1078bp
MEDVGVEYESFSDWEPSERDAHLDTSQGKKSRPLSFVLVEDDEPSVATPG
RASIPDGRPKRRSPKSAQEALKRRRTAPMTPNNPSSRARMSATISKSSPP
VPSAATHNAELDTNVPVYDINDRIPRYNRPQSSQPASNPAANTTREATDD
FANTAVPDTPISTGLRLPGTDSFQRLTSKRSKPPVSDGPIGLPRLRGSSI
RQQGGNLDALEKNAFRSRSQTNPMSAVGEILDASPSLKPIRLPEPSEDNP
LGVPPHVSPGAMPDRAFAPPRQREQRRHSAPGPHRRKETLLGVQPGPNEH
THSAKTTTTTIPSNADVQMHTMAEEPTLPAPDTRIPFGMPPPLVGAPPFP
RSPYAMPPVRPGGNLGFDLSRMTGSGVGAPNAIDHRVPKQHFALDAPQLG
AVADERFHGLPPHAVLHMNRMPHPSYLPFPPMVPMTAYREHPPMPTFFPQ
VSHMPMNPYVQHAEGVVYPNQSAIFNPTIGAAPLPCNPISASTNVVPGLD
PESAPVSTRVMASQPVHASDGHETNKQAWKDAQQTIENPRLSADSLDLEN
NRKVAKDDENSRRRKQSARKQQLKKPADPSVIEVDEIPCDDEEDGVDYVS
RLIQIQQKKKFLSLPVPLFFPVQAKDGGGAGWKCVMTAKLLNKSPPEVIE
TTKVARNQKRAKRAAAKELLSSLESRVPELFQAESNGKPTGQAVKSQSAL
NAISVLVRDGHLPCMPNMETEEVNDTDEDRWRCSATLFTNDHGRKIFVEY
GPSKSSAKQKWARKALETLIALKASGAEQYRCFVDPVRATKKKTMASVPK
ASELIVRTSDDERSSASCDDIVEDMDFSLELPSDYELVVAKTDADCERWF
DVFAQPGAKLGVFIDSKSARLSVDENYSLENDCGSGKVKLPIICFSTASS
CIVIRIDNKKELQNESGIYHVPGTFWVPESAAEAFEDPRVQKAVLEGDDG
LDLLTMDHGIQCATVQDVAVSSLAIAGYGKVSGSGHLSSLRDLTKYWMRK
EAKDVSWEGIWPGKRHLVEKWLSQDSQGAAIAVLCAYATFCIREKVGDAA
RLKRINSPGAPNDLDVLSRRIVEVGVG*
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