Gvermi4383.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi4383.t1
Unique NameGvermi4383.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length403
Homology
BLAST of Gvermi4383.t1 vs. uniprot
Match: A0A2V3IUN5_9FLOR (BZIP domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUN5_9FLOR)

HSP 1 Score: 122 bits (307), Expect = 4.860e-27
Identity = 65/115 (56.52%), Postives = 94/115 (81.74%), Query Frame = 0
Query:  279 KAMRAERNRQSAAASRERKKHYIKELERKVSVLSQENAKMKKMQFRLALEKREHESKVVDEMKCLRRQIVDRDLDVHKLSQLLQNAKLRGGGSDEEDDELDLPRPKTWDAAEWRK 393
            KA+RAERNRQSAAASRERKK +IKE+ER+V +LS+ENA M+  Q R   ++ E ESK++ +MK L+R++VDRD+ +H+LS+ L++AK++ G  ++E++  D+PRP TWD+AEWRK
Sbjct:  399 KAVRAERNRQSAAASRERKKQHIKEIERRVEILSRENAMMQLSQLRTVRQRIELESKILHQMKELQRKVVDRDMQIHRLSRQLKDAKIKNG--EDENEHSDIPRPSTWDSAEWRK 511          
BLAST of Gvermi4383.t1 vs. uniprot
Match: A0A2V3IXC3_9FLOR (BZIP domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IXC3_9FLOR)

HSP 1 Score: 122 bits (305), Expect = 9.560e-27
Identity = 64/116 (55.17%), Postives = 95/116 (81.90%), Query Frame = 0
Query:  279 KAMRAERNRQSAAASRERKKHYIKELERKVSVLSQENAKMKKMQFRLALEKREHESKVVDEMKCLRRQIVDRDLDVHKLSQLLQNAKLRGGGSDEEDDELDLPRPKTWDAAEWRKK 394
            K +RAERNRQSAAASRERKK +IKELER+V +LS+ENA M+  Q R   ++ E ESK++ +MK L+R++VDRD+ +H+LS+ L++AK++ G  ++++++ D+PRP TWD+AEW+KK
Sbjct:  406 KVIRAERNRQSAAASRERKKQHIKELERRVEMLSRENAMMQLSQLRTVRQRIELESKILHQMKALQRKVVDRDMQIHRLSRQLKDAKIKNG--EDKNEQSDIPRPSTWDSAEWQKK 519          
BLAST of Gvermi4383.t1 vs. uniprot
Match: A0A2V3IID2_9FLOR (GTP-binding protein yptV5 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IID2_9FLOR)

HSP 1 Score: 120 bits (302), Expect = 5.430e-26
Identity = 66/118 (55.93%), Postives = 95/118 (80.51%), Query Frame = 0
Query:  277 ASKAMRAERNRQSAAASRERKKHYIKELERKVSVLSQENAKMKKMQFRLALEKREHESKVVDEMKCLRRQIVDRDLDVHKLSQLLQNAKLRGGGSDEEDDELDLPRPKTWDAAEWRKK 394
            A KAMRAERNRQSAAASRERKK +IKELER+V  LS+ENA+M+  Q R   ++ + ESK+++++K L+++++DRDL +HKLS+ L++AK++ G   E ++  ++PRP TWDAAEW+KK
Sbjct:  636 AKKAMRAERNRQSAAASRERKKQHIKELERRVEALSKENARMQLSQLRTVRDRIQQESKILNQVKELQKKVLDRDLQIHKLSRQLKDAKIKHG---EGEECSEIPRPNTWDAAEWKKK 750          
BLAST of Gvermi4383.t1 vs. uniprot
Match: A0A2V3IH34_9FLOR (BZIP domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IH34_9FLOR)

HSP 1 Score: 112 bits (280), Expect = 1.080e-23
Identity = 64/120 (53.33%), Postives = 90/120 (75.00%), Query Frame = 0
Query:  277 ASKAMRAERNRQSAAASRERKKHYIKELERKVSVLSQENAKMKKMQFRLALEKREHESKVVDEMKCLRRQIVDRDLDVHKLSQLLQNAKLRGGGSDEEDDELDLPRPKTWDAAEWRKKMR 396
            A KAMRAERNRQ+AAASRERKK +IKELER+V  LS+ENA M   Q R   ++ + ESK+++++K L+ +++DRDL +HKLS+ L++AK++ G  +E  + L   RP TWDAAEW ++ R
Sbjct:  315 AKKAMRAERNRQNAAASRERKKQHIKELERRVEALSKENALMPLSQLRTVRDRIQQESKILNQVKQLQEKVLDRDLQIHKLSRQLKDAKIKHGECEESSEIL---RPSTWDAAEWEERKR 431          
BLAST of Gvermi4383.t1 vs. uniprot
Match: A0A2V3IFX6_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFX6_9FLOR)

HSP 1 Score: 94.0 bits (232), Expect = 3.140e-19
Identity = 59/105 (56.19%), Postives = 78/105 (74.29%), Query Frame = 0
Query:  279 KAMRAERNRQSAAASRERKKHYIKELERKVSVLSQENAKMKKMQFRLALEKREHESKVVDEMKCLRRQIVDRDLDVHKLSQLLQNAKLRGGGSDEEDDELDLPRP 383
            +AMRA+RNR+ AAAS E K  YIKELER+V V+ QENAKM+  QFRL  ++ E E+K++D++K L+R+      ++HKLS  LQNAK+R G  D+EDDE  LPRP
Sbjct:   44 RAMRAKRNRKIAAASHEHKMQYIKELERRVDVVCQENAKMQVSQFRLVRQRLELEAKILDKIKELKRE------EIHKLSCQLQNAKMRVG-EDDEDDEPALPRP 141          
BLAST of Gvermi4383.t1 vs. uniprot
Match: A0A2V3J1K6_9FLOR (BZIP domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J1K6_9FLOR)

HSP 1 Score: 97.8 bits (242), Expect = 2.190e-18
Identity = 53/116 (45.69%), Postives = 86/116 (74.14%), Query Frame = 0
Query:  279 KAMRAERNRQSAAASRERKKHYIKELERKVSVLSQENAKMKKMQFRLALEKREHESKVVDEMKCLRRQIVDRDLDVHKLSQLLQNAKLRGGGSDEEDDELDLPRPKTWDAAEWRKK 394
            KAMRAERNRQSAAASRERKK ++KEL R++  L ++N   K  + R   E+ E ES++++++  L++++VDR+ ++ +LS+ L++A L+    +++ D  ++PRP TWDAA+W+KK
Sbjct:  465 KAMRAERNRQSAAASRERKKQHVKELRRRIDALVKDNEMWKATKLRTIRERLEQESQMLNQVHQLQQKLVDREKEIQELSRKLEHANLK---REDDGDVCEIPRPSTWDAADWKKK 577          
BLAST of Gvermi4383.t1 vs. uniprot
Match: R7QJF7_CHOCR (BZIP domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QJF7_CHOCR)

HSP 1 Score: 84.0 bits (206), Expect = 7.800e-14
Identity = 55/119 (46.22%), Postives = 78/119 (65.55%), Query Frame = 0
Query:  279 KAMRAERNRQSAAASRERKKHYIKELERKVSVLSQENAKMKKMQFRLALEKREHESKVVDEMKCLRRQIVDRDLDVHKLSQLLQNAKLRGGGSDEEDDELDLPRPKTWDAAEWRKKMRG 397
            KAMRAERNRQSAAASRER+KHYIKELER+V++LS+ENA ++  Q     E+ + ES++V+E   LRR +  +  ++ +L+  L  A L+ G     D+        TWD A WR++ +G
Sbjct:  427 KAMRAERNRQSAAASRERRKHYIKELERRVALLSKENATLQCGQLSFIRERLDEESRLVEENNNLRRDLEQKKSEITELAGKL--ADLKSG-----DETETKTHATTWDGALWRRRRKG 538          
BLAST of Gvermi4383.t1 vs. uniprot
Match: A0A5J4YTX2_PORPP (BZIP domain-containing protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YTX2_PORPP)

HSP 1 Score: 80.5 bits (197), Expect = 3.430e-13
Identity = 51/113 (45.13%), Postives = 75/113 (66.37%), Query Frame = 0
Query:  282 RAERNRQSAAASRERKKHYIKELERKVSVLSQENAKMKKMQFRLALEKREHESKVVDEMKCLRRQIVDRDLDVHKLSQLLQNAKLRGGGSDEEDDELDLPRPKTWDAAEWRKK 394
            RAERNRQSAAASRERKK +I ELER+VS+LS ENA+++  Q     ++  +E ++++E K L++Q+V RD+ + KLS+ L +A +         +   L RP TW  +EW +K
Sbjct:  217 RAERNRQSAAASRERKKQHITELERRVSMLSAENAQLQVEQLNALRKRLNNERQLLEENKNLKKQLVIRDMKIEKLSKKLTDAGI--------SEAEGLKRPSTWAGSEWGQK 321          
BLAST of Gvermi4383.t1 vs. uniprot
Match: A0A1X6PL35_PORUM (BZIP domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PL35_PORUM)

HSP 1 Score: 80.1 bits (196), Expect = 1.870e-12
Identity = 50/113 (44.25%), Postives = 73/113 (64.60%), Query Frame = 0
Query:  279 KAMRAERNRQSAAASRERKKHYIKELERKVSVLSQENAKMKKMQFRLALEKREHESKVVDEMKCLRRQIVDRDLDVHKLSQLLQNAKLRGGGSDEEDDELDLPRPKTWDAAEW 391
            KAMRAERNRQSAAASRERKKH+I+ELER+VSVLS ENA+++  Q +    +   +  + +E   L+R + ++ +DVH+L+  L   K+       E    +L RP TW + ++
Sbjct:  765 KAMRAERNRQSAAASRERKKHHIRELERRVSVLSAENAQLQVEQLKAFRARISTQRALAEENDKLKRNLAEKSMDVHQLTLQLSTTKIA------ERTAAELRRPSTWTSGQF 871          
BLAST of Gvermi4383.t1 vs. uniprot
Match: A0A7S3EBT1_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EBT1_9RHOD)

HSP 1 Score: 66.6 bits (161), Expect = 1.170e-9
Identity = 40/69 (57.97%), Postives = 53/69 (76.81%), Query Frame = 0
Query:  279 KAMRAERNRQSAAASRERKKHYIKELERKVSVLSQENAKMKKMQFRLALEKREHESKVVDEMKCLRRQI 347
            KA+RAERNRQSAAASRERKKH+I+ELER+VS+LS ENA ++  QF     + E E ++ DE + L+ Q+
Sbjct:    8 KAIRAERNRQSAAASRERKKHHIRELERRVSMLSMENATLQVEQFNKIRARIEEEKRLADENQRLKNQV 76          
The following BLAST results are available for this feature:
BLAST of Gvermi4383.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
A0A2V3IUN5_9FLOR4.860e-2756.52BZIP domain-containing protein n=1 Tax=Gracilariop... [more]
A0A2V3IXC3_9FLOR9.560e-2755.17BZIP domain-containing protein n=1 Tax=Gracilariop... [more]
A0A2V3IID2_9FLOR5.430e-2655.93GTP-binding protein yptV5 n=1 Tax=Gracilariopsis c... [more]
A0A2V3IH34_9FLOR1.080e-2353.33BZIP domain-containing protein n=1 Tax=Gracilariop... [more]
A0A2V3IFX6_9FLOR3.140e-1956.19Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3J1K6_9FLOR2.190e-1845.69BZIP domain-containing protein n=1 Tax=Gracilariop... [more]
R7QJF7_CHOCR7.800e-1446.22BZIP domain-containing protein n=1 Tax=Chondrus cr... [more]
A0A5J4YTX2_PORPP3.430e-1345.13BZIP domain-containing protein n=1 Tax=Porphyridiu... [more]
A0A1X6PL35_PORUM1.870e-1244.25BZIP domain-containing protein n=1 Tax=Porphyra um... [more]
A0A7S3EBT1_9RHOD1.170e-957.97Hypothetical protein (Fragment) n=1 Tax=Rhodosorus... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 294..321
NoneNo IPR availableGENE3D1.20.5.170coord: 278..330
e-value: 2.6E-11
score: 45.3
NoneNo IPR availableCDDcd14686bZIPcoord: 279..328
e-value: 2.86931E-14
score: 64.8741
NoneNo IPR availableSUPERFAMILY57959Leucine zipper domaincoord: 279..321
IPR004827Basic-leucine zipper domainSMARTSM00338brlzneucoord: 274..338
e-value: 2.7E-6
score: 36.9
IPR004827Basic-leucine zipper domainPFAMPF00170bZIP_1coord: 279..321
e-value: 1.7E-10
score: 40.8
IPR004827Basic-leucine zipper domainPROSITEPS00036BZIP_BASICcoord: 282..296
IPR004827Basic-leucine zipper domainPROSITEPS50217BZIPcoord: 276..320
score: 9.541912

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_147contigScGOVlb_147:1457985..1459880 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi4383.t1Gvermi4383.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_147 1457985..1459880 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi4383.t1 ID=Gvermi4383.t1|Name=Gvermi4383.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=403bp
MFPHAFPCALPQAPVEQPVMPMLPDQFCVAPDLAHPPPALAMPPACAALA
AAPGGPSPEPALSFDVEHMTTADLLNNIHPFPLDHIKDTTPHLFSGLVAQ
ESTNIASNTEAPAPTFHTIHSTMPVPSPPPIVHYSSTPSPPNTHSLPLPM
PAHSAAPVPAVPVTPLLTNPNHPATMPLLNPNFRLQPVAPPVGPAIPPHL
TNPPFATPPVAPAIPPHLTNPPFAAPPVAPAIPAHLTNPPFAAPPVAPAI
PAHLTNPALPAHNPALMAVLRQAQAMASKAMRAERNRQSAAASRERKKHY
IKELERKVSVLSQENAKMKKMQFRLALEKREHESKVVDEMKCLRRQIVDR
DLDVHKLSQLLQNAKLRGGGSDEEDDELDLPRPKTWDAAEWRKKMRGYRR
RA*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004827bZIP