Gvermi4373.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi4373.t1
Unique NameGvermi4373.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length847
Homology
BLAST of Gvermi4373.t1 vs. uniprot
Match: A0A2V3IIN5_9FLOR (TACC_C domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IIN5_9FLOR)

HSP 1 Score: 620 bits (1600), Expect = 4.850e-208
Identity = 450/854 (52.69%), Postives = 572/854 (66.98%), Query Frame = 0
Query:    1 MASSSDSPDVIFREKAAPTPTFEGVPVPAALQQLCAAESNAAPPKPSEMTALADRLGRFRLQSPPDSADL----LNAASAKRNQIIESQRHQPLRDKENFYAEPHNDAYVLKGINLFHSPPAAPDRSATLPLRDNKRDRSEHASALALQEDSSSTDLLPTPEALVVK--RSPSSPDVAXXXXXXXXXXXXXXXXXXXXXXXXXXXSSPPEKTSPDAQRDAQPHFQRPAFEAHLRKVLDGKDKWPWPNRKDALLSLAKAVSSHPSEADQVLAECVCNFSTTMNDHLEELRPTVITSALGLIDAVVLKRLACAHAFSNEVFPSVMDVACGRSLTAESAAQTLVRMLNFDERLAASLRDADNPERLTQLVSHMTESGDNELSRSASNALKLLRQQFPDCRPSPARPPAAGACGTPSGPASRA--EEVSESIASFRSGKLSARSTPNLGRRLASLRSKTFRTPSSKLPM-DASEQNASLRRGNASGSSTCNEPHLLDARPGSHILKNMKLGDSVRKHSPKSARSGRMYTEEEVDSIRKHSFRSAVERVKSSHAKELQKRARETDDLRQKLQREHAEVEDLRVVLEEFELTMKKMVSEGNSKANAQQVILEREKSKLKAELIERSDAFDKLKEKYENAKETIVVYENKESRFIEQIKELKRNMVELQKWSNDLKANSEKKLSKAFESVTAYRASXXXXXXXXXXXXXXXXXXXXXXEKAQQSHAETAAKFASVETXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHRLSDVENRLETLTIERQSLKARAYDDMMRMRDLEEQLDAKCKECDELNQICEEVMLQLEQSKTDG 845
            MASSSDSPD+IFREKAAP PTF+GV +PAAL++L + E+N   P  SEMTALA +     L + P  +D     +   +A  N  +  ++H    +KEN  +E   +  +L GI+LF S            +  +   R +  S+    E      + P   AL  K  R P     A                           ++    T+P     A   F   +FEA LRK+L+GK KW WP RKDALLSLAK V+  P EADQ+L   +  F++ ++DHLEELRPTVITSAL LI+ +VL++L+ A+ F+NEVFPSVMDV CGRSLTAESAA+TLV +L FDE+LA +LRDADNPERL QL++ + ESGD  +   A  A+  +R +      +P+RP +     +P   A+     EV    + FRSG++SARSTPN+ R +   +S   R      P  D  E +++ R GN    +  +E   LD R G+ +L+NMKL DSVRK SP  +R GRM++EE+V+ I+ +S    V+++K+SH+KELQ+R+R+ DD+ +KL+RE AEV++LR VLE+++LTMKKMVSEGNSKANAQQ++LE+EK+KLKAEL+ERSDAF+KLKE+YENAKE IVVYENKE+RFIEQIKELKRNMVELQKWSNDLKANSEKKL+ AFESVTAYRAS                      EKAQQSHAETAAKFA +E XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    RLS+VE  LE  T+E Q+LKARAYDDM+R+R+LE+ L+AK KECDEL++ C E+M +LE+S+  G
Sbjct:    1 MASSSDSPDIIFREKAAPLPTFDGVALPAALRELRSTENNRPSPPSSEMTALAQKFRSVYLHATPQKSDSDIRQIEEHAAPTNSHVSQEKHS---EKENEPSEMKRNK-ILNGIDLFQSEKETEMDYEMAAVHKSHDSRFQDVSSAGNVEKP--PQIAPN-NALDSKSSRPPLGLQSAERKGNFVEKSNVPSGKDHGEDSAKSRQANTDNLTNPIPSPSA---FVPSSFEADLRKILEGKKKWSWPQRKDALLSLAKTVAMVPKEADQILGRSINAFASAISDHLEELRPTVITSALDLINIIVLRKLSMANEFANEVFPSVMDVVCGRSLTAESAAKTLVHLLQFDEKLATNLRDADNPERLLQLITKLAESGDISVKEGACKAIVAIRSEVSSGLRTPSRPTSIPTNASPGSIATEIGKAEVLNPESGFRSGRISARSTPNIRRVMGLRKSSVLRNLQGVRPSTDLLEYSSATRSGNYKSMTPGSELLPLDVRSGASVLRNMKLSDSVRKISPSPSR-GRMFSEEDVEVIKNNSVALVVDKLKASHSKELQRRSRDVDDMHKKLKRERAEVQELRSVLEQYQLTMKKMVSEGNSKANAQQILLEKEKNKLKAELLERSDAFEKLKERYENAKEAIVVYENKENRFIEQIKELKRNMVELQKWSNDLKANSEKKLTIAFESVTAYRASYIDKEAHANKALSDLERTTAELEKAQQSHAETAAKFAQIEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQSRARLSEVEKTLEGYTVEGQTLKARAYDDMIRIRELEDNLEAKNKECDELHEFCNEIMERLERSEMKG 843          
BLAST of Gvermi4373.t1 vs. uniprot
Match: R7QI72_CHOCR (TACC_C domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QI72_CHOCR)

HSP 1 Score: 300 bits (768), Expect = 7.170e-85
Identity = 323/926 (34.88%), Postives = 460/926 (49.68%), Query Frame = 0
Query:    5 SDSPDVIFREKAAPTPTFEGVPVPAALQQLCAAESNA-APPKPSEMTALADRLGRFRLQ-SPPDSADLLNAASAKRNQI-----IESQRHQPLRDKENFYAEPHNDAYVLKGINLFHSPPAAP--DRSATLPLRDNKRDRSEHASALALQEDSSSTD---------LLPTPEALVVKRSPSS----PDVAXXXXXXXXXXXXXXXXXXXXXXXXXXXSSP------------------------PEKTSPDA-----------QRDAQPHFQRPAF-EAHLRKVLDGKDKWPWPNRKDALLSLAKAVSSHPSEAD-QVLAECVCNFSTTMNDHLEELRPTVITSALGLIDAVVLKRLACAHAFSNEVFPSVMDVACGRSLTAESAAQTLVRMLNFDERLAASLRDADNPERLTQLVSHMT--ESGDNELSRSASNALKLLRQQ-------FPDCRPSPARPPAAGA-------------CGTPSGPASRAEEVSESIASFRSGKLSARSTPNLGRRLASLRSKTFRTP-----SSKL-PMDASEQNASLRRGNASGSSTCNEPHLLDARPGSHILKNMKLGDSVRKHSPKSARSGRMYTEEEVDSIRKHSFRSAVERVKSSHAKELQKRARETDDLRQKLQREHAEVEDLRVVLEEFELTMKKMVSEGNSKANAQQVILEREKSKLKAELIERSDAFDKLKEKYENAKETIVVYENKESRFIEQIKELKRNMVELQKWSNDLKANSEKKLSKAFESVTAYRASXXXXXXXXXXXXXXXXXXXXXXEKAQQSHAETAAKFASVETXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHRLSDVENRLETLTIERQSLKARAYDDMMRMRDLEEQLDAKCKECDELNQICEEVMLQLEQSKT 843
            S  PD+  R  + P PTF G+ +P  L+ L      A + P PSE+TALA RL   RL  SP    +    A+ K  ++     +ES +      +   + +P      + G  LF   PA+   ++        + R  S    A +LQE+ +++D         L  TP    +  SP++    PDV                             S                         PE+ + D            Q D +      AF    L+ +L+GKDKW WP R +A+ ++++A+ + PS+ D   + E + + S  +ND+L+ELRP++I SAL LI++V+  +      F+ +VFPSVMD++CGRSLTA  AA+ +  ML     L+  L DADNP+RL +L+      ESG  E    A  AL L+ Q         P        P A                C T     + A  V  +  S    K S+ + P     + S     FRTP     S +L P  +SE  A+ R+   +        +L D R  + +++N KLG+S+RK SP S R  R YTEE++   R  + R  +E      AK   +  +E  +L +K  +E +   +L  VL E+E TM+KM+S+GNS+A+A    LE+E  +LKAEL+E ++A++ +KE+Y+N K+ I VYENKE+RFIEQI+ LK+N+ ELQKWS+DLK N EKKL+ AF  VT +RAS                       K+    A+  A  +++E          XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                 RQ+LKARAYDD+ R+R+LE +L  K +E ++L+ +C+E   QLE+ K+
Sbjct:    7 SPDPDISIRTPSRPLPTFSGLTLPTPLRALYKHHEGALSTPHPSELTALATRLKSIRLDVSPTPDPNEPERAAPKPTKLDFGEHVESDKENVDNGRRVDHVKPPRTPKRV-GSGLFAGSPASDIGEKLRASLHNSDARVASLTPRAPSLQEEDNTSDVETDGSPPSLTETPTTQTIFTSPAAQRAGPDVQERLTPHNSEASASNHSVECQPGDDADSLSSEGANIPEQLTERIEPSPTTNEELHPEQVTSDTLEQQVGSVQSEQDDTEQDASESAFLSEQLQILLEGKDKWSWPKRCEAMTTVSQALVTSPSDGDIATVREAMASLSNAVNDNLDELRPSIINSALRLINSVLTSKADRGSNFAEDVFPSVMDISCGRSLTAREAARCIALMLQVYPCLSNILEDADNPDRLIELLQLDVDEESGLPETQDRAKLALPLVHQAVHGEVSVIPHSPEGVVTPAAQNGPCQASNESVSPVHCSTNKNSPASAGRVESATDSAEKTKSSSAAQPT---EIPSPSGSDFRTPQQHRFSERLGPTSSSEFKATKRQSLRA--------NLADIRLNTPLMRNKKLGNSIRKISPLSGRKKRTYTEEDIAEARSAAIRVVMEESAQREAKLRAEYQKERSELEKKFLKEQSLAAELNSVLTEYEQTMQKMISQGNSQASAYCTSLEKETKRLKAELLEVTEAYESVKERYDNGKQAIKVYENKETRFIEQIRTLKKNLSELQKWSDDLKTNCEKKLANAFSQVTTFRASYMEAEAHRNKATVDLNRVQLELTKSLSDRAKIVATLSTLEASLHQEEDKTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQALKARAYDDLTRIRELENELHVKDREYEDLSNLCDEACSQLEKIKS 920          
The following BLAST results are available for this feature:
BLAST of Gvermi4373.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IIN5_9FLOR4.850e-20852.69TACC_C domain-containing protein n=1 Tax=Gracilari... [more]
R7QI72_CHOCR7.170e-8534.88TACC_C domain-containing protein n=1 Tax=Chondrus ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 810..844
NoneNo IPR availableCOILSCoilCoilcoord: 540..584
NoneNo IPR availableCOILSCoilCoilcoord: 744..802
NoneNo IPR availableCOILSCoilCoilcoord: 688..715
NoneNo IPR availableCOILSCoilCoilcoord: 614..662
NoneNo IPR availableCOILSCoilCoilcoord: 586..606
NoneNo IPR availableGENE3D1.10.287.1490coord: 686..844
e-value: 1.1E-5
score: 26.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 126..141
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 386..468
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 189..208
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 81..225
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 422..468
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 84..99
NoneNo IPR availablePANTHERPTHR13924:SF10TRANSFORMING ACIDIC COILED-COIL PROTEIN, ISOFORM Kcoord: 135..680
IPR007707Transforming acidic coiled-coil-containing protein, C-terminalPFAMPF05010TACC_Ccoord: 539..691
e-value: 7.0E-12
score: 45.5
IPR039915TACC familyPANTHERPTHR13924TRANSFORMING ACIDIC COILED-COIL CONTAINING PROTEIN 1/2coord: 135..680

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_147contigScGOVlb_147:1397221..1399761 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi4373.t1Gvermi4373.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_147 1397221..1399761 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi4373.t1 ID=Gvermi4373.t1|Name=Gvermi4373.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=847bp
MASSSDSPDVIFREKAAPTPTFEGVPVPAALQQLCAAESNAAPPKPSEMT
ALADRLGRFRLQSPPDSADLLNAASAKRNQIIESQRHQPLRDKENFYAEP
HNDAYVLKGINLFHSPPAAPDRSATLPLRDNKRDRSEHASALALQEDSSS
TDLLPTPEALVVKRSPSSPDVAQPPARSDGREPKSATTKQHPPPASDARS
SPPEKTSPDAQRDAQPHFQRPAFEAHLRKVLDGKDKWPWPNRKDALLSLA
KAVSSHPSEADQVLAECVCNFSTTMNDHLEELRPTVITSALGLIDAVVLK
RLACAHAFSNEVFPSVMDVACGRSLTAESAAQTLVRMLNFDERLAASLRD
ADNPERLTQLVSHMTESGDNELSRSASNALKLLRQQFPDCRPSPARPPAA
GACGTPSGPASRAEEVSESIASFRSGKLSARSTPNLGRRLASLRSKTFRT
PSSKLPMDASEQNASLRRGNASGSSTCNEPHLLDARPGSHILKNMKLGDS
VRKHSPKSARSGRMYTEEEVDSIRKHSFRSAVERVKSSHAKELQKRARET
DDLRQKLQREHAEVEDLRVVLEEFELTMKKMVSEGNSKANAQQVILEREK
SKLKAELIERSDAFDKLKEKYENAKETIVVYENKESRFIEQIKELKRNMV
ELQKWSNDLKANSEKKLSKAFESVTAYRASYIDKEAHANKALSDLKRTTT
ELEKAQQSHAETAAKFASVETELHKEQDARASAEAALTTAKGSLTRITNQ
KDQLQGELAKAEEELSRLRTEVAELKEKGHRLSDVENRLETLTIERQSLK
ARAYDDMMRMRDLEEQLDAKCKECDELNQICEEVMLQLEQSKTDGS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007707TACC_C
IPR039915TACC