Gvermi4347.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi4347.t1
Unique NameGvermi4347.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length244
Homology
BLAST of Gvermi4347.t1 vs. uniprot
Match: A0A2V3IHT5_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IHT5_9FLOR)

HSP 1 Score: 256 bits (654), Expect = 1.130e-82
Identity = 140/240 (58.33%), Postives = 172/240 (71.67%), Query Frame = 0
Query:    1 MTAFVFLSPFQLTGRPLAGRTSPPRRPRAPHVPERPSRSRCA--PRCAGEPSS-DGQAPSGAVLCGALELSFRNVWLRLMTSGVGPEYTNAIRSFVLAAAASYKAGYSLTALKFELVTHEKHTTYMGRDTRLNDDEKKTRFIWLALVYLTLKRCQFPTETNSTIDIAADIGASDVKELMPGLAAFVNNVYDAAQRGLDLQRYKLELSLKRDDNSPSLDKGQVSIRSQWARIVFTTLELMP 237
            M AF     F++   P + R S P   RA     R S +R    PRC+ + SS + Q PSGAVLCGALE+SFRNVWLRLMT+GVGP Y  AIR+FVLAAAASYKAGYSLTALKFEL THEK    MG+D +LNDDEK+TR IWLALVY TL R +FP+E    +D   ++  S++ ++   + A V++V DAAQRG DLQR+KLEL+LK+D ++P LD  Q SIRSQWARIVF+TL L+P
Sbjct:    5 MAAFASSPTFRVKLSPRSTRCSSPTLRRARPTTPRRSAARVVYTPRCSSDQSSSEAQPPSGAVLCGALEVSFRNVWLRLMTNGVGPAYNQAIRAFVLAAAASYKAGYSLTALKFELSTHEKRGVIMGQDIQLNDDEKRTRLIWLALVYATLSRYRFPSE-RGVLDARKELSESELSDIARAIFALVDSVCDAAQRGYDLQRFKLELNLKKDKDAPPLDANQASIRSQWARIVFSTLGLLP 243          
BLAST of Gvermi4347.t1 vs. uniprot
Match: R7Q7C3_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q7C3_CHOCR)

HSP 1 Score: 199 bits (506), Expect = 2.590e-60
Identity = 96/182 (52.75%), Postives = 127/182 (69.78%), Query Frame = 0
Query:   56 PSGAVLCGALELSFRNVWLRLMTSGVGPEYTNAIRSFVLAAAASYKAGYSLTALKFELVTHEKHTTYMGRDTRLNDDEKKTRFIWLALVYLTLKRCQFPTETNSTIDIAADIGASDVKELMPGLAAFVNNVYDAAQRGLDLQRYKLELSLKRDDNSPSLDKGQVSIRSQWARIVFTTLELMP 237
            P G ++  ALE++FRNVW+RLMT+GVGPEY +AI++FV+A  A+YKAGYS+TA+K EL  +E    YMGRD  LND EK+TR IWLALVYLTL +  F ++      ++AD+  S +  L+PGL   V +V DAA RG  LQ +K+EL LK+D     L   + SIRSQW+RI+F T  L+P
Sbjct:   59 PGGPIITKALEVTFRNVWIRLMTAGVGPEYDDAIQAFVIACIAAYKAGYSITAIKLELAANETQAKYMGRDISLNDQEKETRLIWLALVYLTLAKFNFASDRTPP-PVSADLQGSKMDSLVPGLTGLVESVCDAAARGYSLQTFKMELGLKKDTGDKPLSGAEASIRSQWSRIIFATYNLLP 239          
BLAST of Gvermi4347.t1 vs. uniprot
Match: A0A7S0BPT7_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BPT7_9RHOD)

HSP 1 Score: 131 bits (329), Expect = 9.870e-34
Identity = 73/208 (35.10%), Postives = 115/208 (55.29%), Query Frame = 0
Query:   47 GEPSSDGQAPSG------AVLCGALELSFRNVWLRLMTSGVGPEYTNAIRSFVLAAAASYKAGYSLTALKFEL-----VTHEKHTTYMGRDTRLNDDEKKTRFIWLALVYLTLKRCQFPTETNSTIDIAADIGASDVKELMPGLAAFVNNVYDAAQRGLDLQRYKLELSLKRDDNSPSLDKGQVSIRSQWARIVFTTLELMPGGQPKR 243
            G+P++ G  PSG        +   ++ SFR VW  L+T G+G  Y  A++SF+L   A+YK G+S+ AL+ E+     +    +   + +  +L ++EKKTR++W+ LVYL L++ +FP+E N  + +  D       EL+P L   V+ V +A ++G      K+E+SL R    P +     SIRSQW RIVF T +L+   Q  R
Sbjct:   40 GKPAA-GSGPSGKGDDVSTTISKVIDGSFRKVWFVLLTKGLGEPYNLALQSFILGVMAAYKKGFSIPALQMEISMAKDIYEGPNAEEINKFIQLTENEKKTRYVWIVLVYLALQKLRFPSE-NKNMTVPKD-------ELVPSLQGLVDEVSEAYKKGFSFDGLKMEISLNRQPGQPEISADAASIRSQWMRIVFITNQLVASNQADR 238          
BLAST of Gvermi4347.t1 vs. uniprot
Match: A0A7S2ZR15_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZR15_9RHOD)

HSP 1 Score: 129 bits (324), Expect = 5.720e-33
Identity = 72/214 (33.64%), Postives = 116/214 (54.21%), Query Frame = 0
Query:   44 RC-AGEPSSDGQAPSG--------AVLCGALELSFRNVWLRLMTSGVGPEYTNAIRSFVLAAAASYKAGYSLTALKFEL-----VTHEKHTTYMGRDTRLNDDEKKTRFIWLALVYLTLKRCQFPTETNSTIDIAADIGASDVKELMPGLAAFVNNVYDAAQRGLDLQRYKLELSLKRDDNSPSLDKGQVSIRSQWARIVFTTLELMPGGQPKR 243
            RC +G  S+ G  P G          +   ++  FR VW  L+T G+G  Y  A++SF+L   A+YK G+S+ AL+ E+     +    +   + +  +LN++EKKTR++W+ LVYL L++ +FP+E N  + +  D       EL+P L   V+ V +A ++G      K+E++LK+    P +     SIRSQW RIV+ T +L+   Q  R
Sbjct:   35 RCLSGGSSAAGSGPFGDSKGDDVSTTISKVIDGGFRKVWFVLLTKGLGEPYNLALQSFILGVMAAYKKGFSIPALQMEISMAKDIYEGPNAEEINKFIQLNENEKKTRYVWIVLVYLALQKLRFPSE-NKNMTVPKD-------ELVPSLQGLVDEVSEAYKKGFSFDGLKMEITLKKQPGQPEISADAASIRSQWMRIVYITNQLVASNQKDR 240          
BLAST of Gvermi4347.t1 vs. uniprot
Match: A0A7S0HRM6_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0HRM6_9CRYP)

HSP 1 Score: 128 bits (321), Expect = 1.040e-32
Identity = 72/188 (38.30%), Postives = 104/188 (55.32%), Query Frame = 0
Query:   52 DGQAPSGAVLCGALELSFRNVWLRLMTSGVGPEYTNAIRSFVLAAAASYKAGYSLTALKFELVTHEKHT--TYMGRDTRLNDDEKKTRFIWLALVYLTLKRCQFPTETNSTIDIAADIGASDVKELMPGLAAFVNNVYDAAQRGLDLQRYKLELSLKRDDNSP-SLDKGQVSIRSQWARIVFTTLELM 236
            DG       LC  LELSFR VWLRL TSG    Y+ A++ FV A   ++  GYS+ AL FEL  HE  T    + +  RL + E+  R +WL L+YLTL R Q+ +++     +  D  A         L A V N  +A + G  L+  KLELSL++   +P ++   Q+S+RSQW RI++ T +++
Sbjct:   55 DGDFSGSRALCRDLELSFRKVWLRLYTSGADENYSMALKEFVKATVMAFDRGYSIQALIFELGRHEMETGDPNIDKTIRLTEQERDVREVWLTLIYLTLHRLQYKSKSGENPPLPEDTRA---------LQALVQNTCNALEAGFTLEGLKLELSLRKSQENPETMTPVQLSLRSQWTRIIYLTNDVI 233          
BLAST of Gvermi4347.t1 vs. uniprot
Match: A0A7S4U5U5_GUITH (Hypothetical protein n=2 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4U5U5_GUITH)

HSP 1 Score: 128 bits (321), Expect = 3.550e-32
Identity = 72/188 (38.30%), Postives = 105/188 (55.85%), Query Frame = 0
Query:   52 DGQAPSGAVLCGALELSFRNVWLRLMTSGVGPEYTNAIRSFVLAAAASYKAGYSLTALKFELVTHEKHT--TYMGRDTRLNDDEKKTRFIWLALVYLTLKRCQFPTETNSTIDIAADIGASDVKELMPGLAAFVNNVYDAAQRGLDLQRYKLELSLKRD-DNSPSLDKGQVSIRSQWARIVFTTLELM 236
            DG       LC  LELSFR VWLRL TSG    Y+ A++ FV A   ++  GYS+ AL FEL  HE  T    + +  RL + E+  R +WL L+YLTL R Q+ +++  +  +  D  A         L A V N  +A + G  L+  KLELSL++  +N  ++   Q+S+RSQW RI++ T +++
Sbjct:  106 DGDFSGSKALCRDLELSFRKVWLRLYTSGADENYSMALKEFVKATVMAFDRGYSIQALIFELGRHEMETGDPNIDKTIRLTEQERDVREVWLTLIYLTLHRLQYKSKSGESPPLPEDTRA---------LQALVQNTCNALEAGFTLEGLKLELSLRKSQENQETMTPVQLSLRSQWTRIIYLTNDVI 284          
BLAST of Gvermi4347.t1 vs. uniprot
Match: A0A7S2ZR19_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZR19_9RHOD)

HSP 1 Score: 89.7 bits (221), Expect = 5.310e-19
Identity = 44/116 (37.93%), Postives = 69/116 (59.48%), Query Frame = 0
Query:  128 RLNDDEKKTRFIWLALVYLTLKRCQFPTETNSTIDIAADIGASDVKELMPGLAAFVNNVYDAAQRGLDLQRYKLELSLKRDDNSPSLDKGQVSIRSQWARIVFTTLELMPGGQPKR 243
            +LN++EKKTR++W+ LVYL L++ +FP+E N  + +  D       EL+P L   V+ V +A ++G      K+E++LK+    P +     SIRSQW RIV+ T +L+   Q  R
Sbjct:   19 QLNENEKKTRYVWIVLVYLALQKLRFPSE-NKNMTVPKD-------ELVPSLQGLVDEVSEAYKKGFSFDGLKMEITLKKQPGQPEISADAASIRSQWMRIVYITNQLVASNQKDR 126          
BLAST of Gvermi4347.t1 vs. uniprot
Match: A0A5J4YVK0_PORPP (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YVK0_PORPP)

HSP 1 Score: 94.7 bits (234), Expect = 5.640e-19
Identity = 70/206 (33.98%), Postives = 92/206 (44.66%), Query Frame = 0
Query:   48 EPSSDGQAPSGAVLCGALELSFRNVWLRLMTSGVGPEYTNAIRSFVLAAAASYKAGYSLTALKFELVTHEKHTTYMGR---------DTRLNDDEKKTRFIWLALVYLTLKRCQFPTETNSTIDIAADIGASDVKELMPGLAAFVNNVYDAAQRGLDLQRYKLELSLKRDDNSP---------------SLDKGQVSIRSQWARIV 229
            E   +   P    L  ALELS+  VW+ L T GVG +Y NA+++F+LA  A+Y+ GY+L+A+  EL  +   T    +         +  L+D +KKTR  WL LVYLTL   +  T         AD    D           V  V D  +RG  L   KLE SL     S                 + + Q SIRSQW RIV
Sbjct:   66 ERRDENSKPDDERLVQALELSYVGVWVALGTKGVGEDYLNALKAFILATIAAYERGYTLSAVLLELQINSSFTQNARKLGLSDDQIANASLSDSDKKTREYWLQLVYLTLSYLRH-TPPXXXXXXPADPQKLD---------QLVRFVVDQYKRGFTLDGMKLEQSLNASSTSTXXXXXXXXXXXXRAAQMSRAQASIRSQWMRIV 261          
BLAST of Gvermi4347.t1 vs. uniprot
Match: A0A7S3EFV9_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EFV9_9RHOD)

HSP 1 Score: 86.7 bits (213), Expect = 2.480e-17
Identity = 50/155 (32.26%), Postives = 84/155 (54.19%), Query Frame = 0
Query:   44 RC-AGEPSSDGQAPSG--------AVLCGALELSFRNVWLRLMTSGVGPEYTNAIRSFVLAAAASYKAGYSLTALKFEL-----VTHEKHTTYMGRDTRLNDDEKKTRFIWLALVYLTLKRCQFPTETNSTIDIAADIGASDVKELMPGLAAFVN 184
            RC +G  S+ G  P G          +   ++  FR VW  L+T G+G  Y  A++SF+L   A+YK G+S+ AL+ E+     +    +   + +  +LN++EKKTR++W+ LVYL L++ +FP+E N  + +  D       EL+P L   ++
Sbjct:   35 RCLSGGSSAAGSGPFGDSKGDDVSTTISKVIDGGFRKVWFVLLTKGLGEPYNLALQSFILGVMAAYKKGFSIPALQMEISMAKDIYEGPNAEEINKFIQLNENEKKTRYVWIVLVYLALQKLRFPSE-NKNMTVPKD-------ELVPSLQVILS 181          
BLAST of Gvermi4347.t1 vs. uniprot
Match: A0A7S0ZGG2_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZGG2_9RHOD)

HSP 1 Score: 54.3 bits (129), Expect = 6.370e-6
Identity = 27/58 (46.55%), Postives = 38/58 (65.52%), Query Frame = 0
Query:   46 AGEPSSDGQAPSGAVLCGALELSFRNVWLRLMTSGVGPEYTNAIRSFVLAAAASYKAG 103
            +G P  D    S  ++  ALE+SF  VW+ L   GVG EY+NAIR+F+LA  A+Y++G
Sbjct:   68 SGVPDPDSSRTSNRIVK-ALEVSFAKVWVSLGLHGVGEEYSNAIRAFILATIAAYESG 124          
The following BLAST results are available for this feature:
BLAST of Gvermi4347.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
A0A2V3IHT5_9FLOR1.130e-8258.33Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7Q7C3_CHOCR2.590e-6052.75Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A7S0BPT7_9RHOD9.870e-3435.10Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A7S2ZR15_9RHOD5.720e-3333.64Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A7S0HRM6_9CRYP1.040e-3238.30Hypothetical protein (Fragment) n=1 Tax=Hanusia ph... [more]
A0A7S4U5U5_GUITH3.550e-3238.30Hypothetical protein n=2 Tax=Guillardia theta TaxI... [more]
A0A7S2ZR19_9RHOD5.310e-1937.93Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A5J4YVK0_PORPP5.640e-1933.98Uncharacterized protein n=1 Tax=Porphyridium purpu... [more]
A0A7S3EFV9_9RHOD2.480e-1732.26Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A7S0ZGG2_9RHOD6.370e-646.55Hypothetical protein (Fragment) n=1 Tax=Timspurcki... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 16..49
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..19
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..243
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_147contigScGOVlb_147:1297435..1298166 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi4347.t1Gvermi4347.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_147 1297435..1298166 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi4347.t1 ID=Gvermi4347.t1|Name=Gvermi4347.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=244bp
MTAFVFLSPFQLTGRPLAGRTSPPRRPRAPHVPERPSRSRCAPRCAGEPS
SDGQAPSGAVLCGALELSFRNVWLRLMTSGVGPEYTNAIRSFVLAAAASY
KAGYSLTALKFELVTHEKHTTYMGRDTRLNDDEKKTRFIWLALVYLTLKR
CQFPTETNSTIDIAADIGASDVKELMPGLAAFVNNVYDAAQRGLDLQRYK
LELSLKRDDNSPSLDKGQVSIRSQWARIVFTTLELMPGGQPKR*
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