Gvermi4333.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gvermi4333.t1
Unique Name	Gvermi4333.t1
Type	polypeptide
Organism	Gracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length	629

Homology

[Close]

BLAST of Gvermi4333.t1 vs. uniprot
Match: A0A2V3ILM4_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ILM4_9FLOR)

HSP 1 Score: 296 bits (758), Expect = 6.950e-88
Identity = 158/308 (51.30%), Postives = 226/308 (73.38%), Query Frame = 0

Query:    5 PSSEQPADNIHSRPESQHGKHICDAVLTRPSGELHSFLKQAATDLSEWGRAAAASFLHEPMPLLEESVDLHSSVH--HRIIEQNPVSITPLYLRAFDMHASKQAETPFLKAKVITNCALATGVEPNLPYKVELGLEEAPPKPNAQPFVSSSKPRRAPQGPSINDTFSLGRKPMGPHLHRDANKPVVTRNSLPLFAAGRRNSVATRNMSRMR-INGENSAGVEDNQ-SEDNGPQRPEGLTDEQWKIQKDKLLRKNDLDKVINKIHKIKRLEEYRDQERHRSIEDTTQE---EIVPANDTFYERTKKRQE 305
            P  + P  ++ S+PESQHGK ICD+ L  PS  +  FLKQ  T +S WG+A AASFL EP+PLL+ESV+  SS+H  +++IE +P+S TPL+L +FDM AS +AE P++KAK  T+ A ATGV+P LPY+V+L LEE PPK  AQPFV+ + PRR P+GPS+NDTF+LGR+ +GP L+R   +  V RNS+P     RR++   R +S+ + +  EN   +     S+++  QRP GLTDEQWKIQK+KLLRK D++KV+++I+++K+++E R +E+HR IE+++++    IVPA+DTFYER+K+RQE
Sbjct:    8 PPPKNPVSDMISQPESQHGKQICDSALHLPSDCVQPFLKQVVTHVSGWGKATAASFLSEPVPLLDESVERLSSLHLQNKMIENDPLSATPLFLHSFDMRASTEAEEPYVKAKPATHSAFATGVQPTLPYRVQLELEEPPPKQKAQPFVTKATPRRVPKGPSLNDTFALGRRAIGPDLNRADQRVHVNRNSIPTPVRRRRSNPLHRRVSKPKTVEEENEDEIVGQPLSDESQLQRPPGLTDEQWKIQKEKLLRKKDINKVLSRINELKKVQETRVEEKHRPIEESSEDYLKNIVPADDTFYERSKRRQE 315

The following BLAST results are available for this feature:

BLAST of Gvermi4333.t1 vs. uniprot

BLAST of Gvermi4333.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3ILM4_9FLOR	6.950e-88	51.30	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 297..335
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 277..486
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 530..628
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 338..358
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 204..233
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 204..243
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 294..322
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 323..337
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 611..628
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 536..570
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 146..163
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..25
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 441..456
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 577..592
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 366..432
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 457..486
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 139..163

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
ScGOVlb_147	contig	ScGOVlb_147:1262466..1264352 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gvermi4333.t1	Gvermi4333.t1	Gracilaria vermiculophylla HapMaleFtJ_2017 male	mRNA	ScGOVlb_147 1262466..1264352 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gvermi4333.t1 ID=Gvermi4333.t1|Name=Gvermi4333.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=629bp
MSEAPSSEQPADNIHSRPESQHGKHICDAVLTRPSGELHSFLKQAATDLS
EWGRAAAASFLHEPMPLLEESVDLHSSVHHRIIEQNPVSITPLYLRAFDM
HASKQAETPFLKAKVITNCALATGVEPNLPYKVELGLEEAPPKPNAQPFV
SSSKPRRAPQGPSINDTFSLGRKPMGPHLHRDANKPVVTRNSLPLFAAGR
RNSVATRNMSRMRINGENSAGVEDNQSEDNGPQRPEGLTDEQWKIQKDKL
LRKNDLDKVINKIHKIKRLEEYRDQERHRSIEDTTQEEIVPANDTFYERT
KKRQERERKKQEQAEEALRRKRARLENKKKRNEKRRKGPIQKGRDAGSGE
EEIDQANSGEERNNTSRAAHIQDETEKNSSAPGTEHERERPQDAANHTNI
DHRQQSEHVQPRFEERSGRHQYDYHSHPTDGRPHSNHSLYGPHQGYPSAS
YSSRLNDRQMFDDRNSYHRPHYPPGPERSERQRHYPYEDSRPHLDVPVAH
PFHPGRETIFRGYREDYYPPNPPPQRFYENGGDMPSYRPPPHPMDMPLAP
PNDAEFRSPLPPPADYRRPPPPRYMNSSNYYHPQNQQLFRSHPERDYTLG
PNRMNIPDRMTNPNSPPPRYPHAAPFRP*