Gvermi4332.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi4332.t1
Unique NameGvermi4332.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length532
Homology
BLAST of Gvermi4332.t1 vs. uniprot
Match: A0A2V3IPC3_9FLOR (DNA-(apurinic or apyrimidinic site) endonuclease n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IPC3_9FLOR)

HSP 1 Score: 605 bits (1561), Expect = 1.420e-211
Identity = 317/541 (58.60%), Postives = 386/541 (71.35%), Query Frame = 0
Query:    1 MRITSWNVNGLKSMRPLAPLFKSLDSDIICLQETKMSGPGDPELESVAFVEGYDSFFSICKQKRGYSGVATFCRKKVATPYDAGEGFCNAVGGSEINGTEYENIKYSKENRNAEDEHDPTKFFDSETLAIVKDEGRCVITDHGCFVLINVYVPAVTVTGRATFKIQFLHALEAKVNALRRIGRRVIVAGDFNICPSLRDRAEPVLPTALKEWNQSPSRLWFRALLERNNMVDSFRELHPHADSVYTCWSEATKSRENNHGSRIDLIVASRDFFETSIAEAAVWSHIKGSDHCPVTIRLRQTNETRICAKRLPSFCIRNMPRFEFRQQSLTSMLPKLEPSRPSCITKHARLRSNINKGFGGQANRNTRRITQSPKKGNEFPAYRKRKERYAQTSLLAFMQAKE-HTRPSHGEETTNSVQ---------LSNARESVCEKDGDICLHNGVNSNPSKKASKNQHERELLNQRKVASQAWRKLLSGPPPTPRCRHGELCVLKKVSKSGENRGRTFFSCRYPAGIGNAANCNFFQWAPFRAGFEPT 531
            MRITSWNVNGLKS+RPL PLF +LDSDIICLQETK+SGPGDPELES+AFVEGYDSFFSICKQKRGYSGVATFCRKK+ATP+DAGEGFCN+VGG+ I  +E  N +   +  +AEDE    + F + TL +VK+EGR VITDH  FVLINVY+PAVTV  RA FK++FLHAL AKV AL  IGR+VI+ GDFNICPSL+DRAEPV P+ L  W QSP+R W RALL   NMVD+FRE+HP A   YTCWSEAT+SRENNHGSRIDLIV SRD F + + EAA+WSH+KGSDHCPV+I+L  ++ + IC K +P FC+R MPRF FRQQSL S+  + + +     +    LR + +K       +      QS  K    P  RKRK +YAQTSLLA  +  E +     G   ++S+Q           ++   V E  G   LH      PS+   + +   E   +RK+ S+AW ++L+GPPP PRCRHG  CV+KKVSK+GEN+GRTFFSC YPAG+G  ANCNFFQWAP++AGFEPT
Sbjct:    1 MRITSWNVNGLKSVRPLRPLFATLDSDIICLQETKISGPGDPELESMAFVEGYDSFFSICKQKRGYSGVATFCRKKIATPHDAGEGFCNSVGGASIQVSET-NSQCFDQASDAEDEA-KLRLFSANTLRLVKEEGRSVITDHKRFVLINVYIPAVTVADRAEFKMKFLHALRAKVAALHSIGRKVIIVGDFNICPSLKDRAEPVPPSELVAWEQSPTRTWLRALLNTQNMVDTFREVHPSAKHSYTCWSEATRSRENNHGSRIDLIVTSRDLFLSDVTEAAIWSHVKGSDHCPVSIQLENSHNSGICGKGVPRFCMRYMPRFAFRQQSLKSLYVRTDTN-----SSQRHLRYSPSKTIKVNETQEGNTSVQSLSKDK--PGLRKRKPQYAQTSLLALTKLSESNLGVCDGSRISSSLQPPTTLGKHASQSSANHVVEPTGVRGLH------PSR--PERESNAETAKRRKLTSEAWSRILTGPPPVPRCRHGRFCVIKKVSKTGENKGRTFFSCPYPAGLGKTANCNFFQWAPYKAGFEPT 524          
BLAST of Gvermi4332.t1 vs. uniprot
Match: R7QRZ1_CHOCR (DNA-(apurinic or apyrimidinic site) endonuclease n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QRZ1_CHOCR)

HSP 1 Score: 442 bits (1138), Expect = 9.510e-148
Identity = 254/535 (47.48%), Postives = 326/535 (60.93%), Query Frame = 0
Query:    1 MRITSWNVNGLKSMRPLAPLFKSLDSDIICLQETKMSGPGDPELESVAFVEGYDSFFSICKQKRGYSGVATFCRKKVATPYDAGEGFCNAVGGSEINGTEYENIKYSKENRNAEDEHDPT--KFFDSETLAIVKDEGRCVITDHGCFVLINVYVPAVTVTGRATFKIQFLHALEAKVNALRRIGRRVIVAGDFNICPSLRDRAEPVLPTALKEWNQSPSRLWFRALLER--NNMVDSFRELHPHADSVYTCWSEATKSRENNHGSRIDLIVASRDFFETSIAEAAVWSHIKGSDHCPVTIRLRQTNETRICAKRLPSFCIRNMPRFEFRQQSLTSM-LPKLEPSRPSCITKHARLRSNINKGFGGQANRNTRRITQSPKKGNEFPAYRKRKERYAQTSLLAFMQAKEHTRPSHGEETTNSVQLSNARESVCEKDGDICLHNGVNSNPSKKASKN---QHERELLNQRKVASQAWRKLLSGPPPTPRCRHGELCVLKKVSKSGENRGRTFFSCRYPAGIGNAANCNFFQWAPFRAG 527
            M++ SWNVNGL+  RPL  +FK L++DI+C QET++SG  D  LES+AFV GYDSFFSICK+KRGYSGVATFCR+ VATP++AGEG  + VGG+ I+  E       K       E  P   K    E++++++DEGRCVITDHG FVL+NVY+PAV+V GR+ FK+QFLHAL AK+ ALR   R V+VAGDFNICPS+ D AE +  +   EW   PSR WFR LL    ++ VDSF+E HP   + YTCWSE T++RENNHG RIDLIV +R  F  ++ EA + + + GSDHCPVT+ L  T  +    K+ P FC + M RF  RQQ+LT++ L K +       T    +R         Q+N      ++SP         RK KE+            K HT         N   LS+ R S         L  G +   S K+ +N     ++   +++K  + AWRKLL GPPP P CRHGE CVL  V K GEN+G+TFFSC YPAG G  ANC FF+WAPF+AG
Sbjct:    1 MKVVSWNVNGLRKFRPLGDMFKQLNADILCFQETRVSGEWDDSLESLAFVAGYDSFFSICKEKRGYSGVATFCRRGVATPWNAGEGLRSKVGGASISFNEAGACGSCKF------EVCPCEGKGCSEESMSLIEDEGRCVITDHGLFVLVNVYIPAVSVEGRSAFKMQFLHALLAKIEALRAKSRNVMVAGDFNICPSISDCAERIPQSLHMEWAMRPSRCWFRNLLSSTGSDFVDSFKEKHPFKMNAYTCWSEMTRARENNHGVRIDLIVMNRSLFTRAVREADIEAGVMGSDHCPVTVSLSDTEFSGQVPKQPPPFCTKYMKRFSVRQQTLTNLFLNKSQRYANKDATTTESIRPTTQNPLVPQSN-----ASKSPLGVASKRQIRKGKEK-----------PKNHT---------NLGLLSSPRFSDSASKKHDTLPPGSSKQSSVKSDENLWSSTQKADSDRKKETALAWRKLLKGPPPPPLCRHGERCVLNTVLKPGENKGKTFFSCPYPAGEGLNANCKFFKWAPFKAG 504          
BLAST of Gvermi4332.t1 vs. uniprot
Match: UPI001E1DBD9F (DNA-(apurinic or apyrimidinic site) endonuclease 2-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DBD9F)

HSP 1 Score: 282 bits (721), Expect = 4.510e-87
Identity = 161/349 (46.13%), Postives = 214/349 (61.32%), Query Frame = 0
Query:    1 MRITSWNVNGLKSMRP-LAPLFKSLDSDIICLQETKMSGPGDPELESVAFVEGYDSFFSICKQKRGYSGVATFCRKKVA---------TPYDAGEGFCNAVGGSEING----TEYENIKYSKENRNAEDEHDPTKFFDSETLAIVKDEGRCVITDHGCFVLINVYVPAVTVTGRATFKIQFLHALEAKVNALRRIGRRVIVAGDFNICPSLRDRAEPVLPTALKEWNQSPSRLWFR-ALLERNNMVDSFRELHPHADSVYTCWSEATKSRENNHGSRIDLIVASRDFFETSIAEAAVWSHIKGSDHCPVTIRLRQTNETRICAKRLPS-FCIRNMPRFEFRQQSLTSML 333
            +RI SWNVNGL++++P L  +F+SL +DI+C+QET++S   D +LE +A V GY+SFFS C  + GYSGVATF +  +          TP DAGEG  NA+GG+ IN     +  + ++ S  N        P     ++ L +++ EGR VITDH  FVLINVY+PAV+V GRA FK+    ALE KV ALR  GR V++ GDFNI P+  D AEPV    +  +N  PSR W R  LL    + DSFRELHP   S YTCWSEAT++RENN G+RIDLI+   + F   +  A++   + GSDHCP+++ LR        A   P  FC R +PRF  +Q S+  ML
Sbjct:    2 VRIVSWNVNGLRTLKPSLKAVFESLQADIVCVQETRIS-QSDVDLERLALVPGYESFFSFCSVRNGYSGVATFTKNGLPSNGRGAINLTPRDAGEGLANAIGGAAINVIPDLSTTQGLEASCCNEGNLAPCIPLSV-SADELELIRREGRVVITDHERFVLINVYLPAVSVDGRAKFKLAVCRALELKVRALREAGRSVVIVGDFNIAPTSCDVAEPV--DDMSSFNSRPSRQWLRNVLLGEIGLKDSFRELHPSFTSAYTCWSEATRARENNFGARIDLILVDEELFHAQVVAASILCDVTGSDHCPISLELRAGIMGCCMAMNTPPPFCTRYLPRFSAKQLSIRDML 346          
BLAST of Gvermi4332.t1 vs. uniprot
Match: UPI001ABECA82 (DNA-(apurinic or apyrimidinic site) endonuclease 2 isoform X1 n=5 Tax=Bufo TaxID=8383 RepID=UPI001ABECA82)

HSP 1 Score: 241 bits (616), Expect = 1.480e-69
Identity = 186/566 (32.86%), Postives = 271/566 (47.88%), Query Frame = 0
Query:    1 MRITSWNVNGLKSMRP-LAPLFKSLDSDIICLQETKMSGPGDPELESVAFVEGYDSFFSICKQKRGYSGVATFCRKKVATPYDAGEGFCNAVGGSEINGTEYENIKYSKENRNAEDEHDPTKFFDSETLAIVKDEGRCVITDH---------GCFVLINVYVPAVTVTG--RATFKIQFLHALEAKVNALRRIGRRVIVAGDFNICPSLRDRAEPVLPTALKEWNQSPSRLWFRALL--------ERNNM-------VDSFRELHPHADSVYTCWSEATKSRENNHGSRIDLIVASRDFFETSIAEAAVWSHIKGSDHCPVTIRLRQTNETRICAKRLPSFCIRNMPRFEFRQQSLTSMLPK----LEPSRPSCITKHARLRSNINKGFGGQANRNTRRITQSP-KKGNEFPAYRKRKERYAQTSLLAFMQ--AKEHTRPSHGEETTNSVQLSNARESVCEKDGDICLHNGVNSNPSKKASKNQHERELLNQRKVASQAWRKLLSGPPPTPRCR-HGELCVLKKVSKSGENRGRTFFSCRYPAGIGN--AANCNFFQWAPFRAGFE 529
            M+I SWN+NG+++ R  L  +  SLD+DIICLQETK++   D   E VA VEGY+S+FS C+ + GYSGVATFC K   TP  A EG    + G + +   Y N +               +F++ E L++   EGR VIT H             +INVY P        R T+K++F   L+ +   + R G  VI+ GD N      D  +P   T L+ + ++P R W    L        E  N        +DSFR  HP   + +TCW  A+ +R+ N+G+RID I+A+R   E    ++ +   ++GSDHCPV + ++      + A + PS C + +P F  RQQ L+  L +    LE S      + +   S+ +        R   ++  S  KKG   P       +  Q SLL F +    + T  S+GE+ +   +      ++  + G  C      S P    S+N       NQ+  A   W+ LL GPPP P C+ HGE CVL+ V K G N GR F+ C  P G  +   A CNFF W   ++G +
Sbjct:   16 MKIVSWNINGIRATRVGLKEILDSLDADIICLQETKVTR--DLLEEPVAIVEGYNSYFSFCRVRSGYSGVATFC-KNTTTPLAAEEGLSGQLNGHKGSIGCYGNTE---------------EFYEEELLSL-DQEGRAVITQHTILTADGKEDTLTVINVYCPRADPEKPERKTYKLRFYRLLQIRAETILRNGGHVIILGDVNTSHKPLDHCDP---TDLEVFEENPGRQWLNQFLADPTTSKTEDANQPNVGGLFLDSFRYFHPTQKNAFTCWCSASGARQTNYGTRIDYILANRKLVEAEFLDSIILPEVEGSDHCPVKVFMKCFP---LAAVKCPSLCTKYLPEFAGRQQKLSQFLVRKNKDLEVSTGDTKEQFSSQSSSESSEPSAARKRTNEKVGGSNGKKGKPVP-------KSGQGSLLGFFKPVVPKSTALSNGEKKSVISESETKNVTLTTQQG--C------SLPPTSGSQNG------NQQPTAF--WKTLLKGPPPPPNCKGHGEPCVLRTVKKPGPNCGRQFYVCARPVGHSSNPQARCNFFLWVNKKSGAD 533          
BLAST of Gvermi4332.t1 vs. uniprot
Match: A0A8D3DH26_SCOMX (DNA-(apurinic or apyrimidinic site) endonuclease n=3 Tax=Scophthalmus maximus TaxID=52904 RepID=A0A8D3DH26_SCOMX)

HSP 1 Score: 237 bits (605), Expect = 5.970e-68
Identity = 187/571 (32.75%), Postives = 265/571 (46.41%), Query Frame = 0
Query:    1 MRITSWNVNGLKSMRP-LAPLFKSLDSDIICLQETKMSGPGDPELESVAFVEGYDSFFSICKQKRGYSGVATFCRKKVATPYDAGEGFCNAVGGSEINGTEYENIKYSKENRNAEDEHDPTKFFDSETLAIVKDEGRCVITD----HGCFVLINVYVPAVTVTG--RATFKIQFLHALEAKVNALRRIGRRVIVAGDFNICPSLRDRAEPVLPTALKEWNQSPSRLWFRALL-----ERNN----------------------MVDSFRELHPHADSVYTCWSEATKSRENNHGSRIDLIVASRDFFETSIAEAAVWSHIKGSDHCPVTIRLRQTNETRICAKRLPSFCIRNMPRFEFRQQSLTSMLPKLEPSRPSCITKHARLRSNINKGFGGQANRNTRRITQSP--KKGNEFPAYRKRKERYAQTSLLAFMQAKEHTRPSHGEETTNSVQLSNAR-------ESVCEKDGDICLHNGVNSNPSKKASKNQHERELLN---QRKVASQA-WRKLLSGPPPTPRCR-HGELCVLKKVSKSGENRGRTFFSCRYPAGIGN--AANCNFFQW 521
            M+I +WN+NG+++    +     SLD+D+IC+QETK++   D   E  A V+GY+S+FS  + + GYSGVAT+C K  ATP  A EG    + G E     Y                D T+F   E L ++ +EGR VIT     H    +INVY P        R  FK+QF   L+ +  AL + G  VI+ GD N      D  +P   + + ++ ++P R W    L     +RN                        VD+FR  HP   S +TCWS  T +R+ N+G+RID I A R         A +   ++GSDHCPV  RLR      + + + P  C R +P F  RQQ L+  L K+EP      T   R   N+N    G  +   R +  +P   KG +    +   +   Q SLL+F + K          TTN+V L   R       E+V    G     +  +S  S  ++ ++H+R+       R  +S   W+ +L GPPP P C+ HGE CVL+ V K G N G+ FF C  P G  +   A CNFF W
Sbjct:    1 MKIITWNINGIRTFGGGVKKTLDSLDADVICVQETKVTR--DLLDERSAIVDGYNSYFSYSRGRSGYSGVATYC-KDSATPCAAEEGLTGLLTGHEGAVGCY---------------GDHTEF-SGEELQLLDNEGRAVITQCPFQHSKLTVINVYCPRADPDKPERKQFKLQFYKLLQCRAEALLKDGSHVIILGDVNTSHRPIDHCDP---SDVDQFGENPGRKWLNVFLHQPDEDRNEXXXXXXXXXSEGTSTDSVRGGKFVDTFRYFHPTRSSAFTCWSTLTGARQTNYGTRIDYIFADRRLVREQFVAADIMPEVEGSDHCPVWGRLRCP---LVPSSKPPPLCTRYLPEFAGRQQKLSRFLVKVEP------TSVERGEENLNPLAAGNVSGRKRALASAPVVPKGKKTKTVKTCSK--PQGSLLSFFKPKP---------TTNAVPLLTLRPGTSTTGETVQTDGGSEATEDEGSSQRSSSSTADKHDRQAKTPQPDRGASSLVFWKSILHGPPPPPSCKVHGEPCVLRTVKKEGPNMGKQFFVCARPQGHASNPEARCNFFSW 529          
BLAST of Gvermi4332.t1 vs. uniprot
Match: Q6DDT4_XENLA (DNA-(apurinic or apyrimidinic site) endonuclease n=2 Tax=Xenopus laevis TaxID=8355 RepID=Q6DDT4_XENLA)

HSP 1 Score: 236 bits (602), Expect = 1.100e-67
Identity = 179/567 (31.57%), Postives = 266/567 (46.91%), Query Frame = 0
Query:    1 MRITSWNVNGLKSMRP-LAPLFKSLDSDIICLQETKMSGPGDPELESVAFVEGYDSFFSICKQKRGYSGVATFCRKKVATPYDAGEG----FCNAVGGSEINGTEYENIKYSKENRNAEDEHDPTKFFDSETLAIVKDEGRCVITDH---GC------FVLINVYVPAVTVTG--RATFKIQFLHALEAKVNALRRIGRRVIVAGDFNICPSLRDRAEPVLPTALKEWNQSPSRLWFRALL------ERNN-------------MVDSFRELHPHADSVYTCWSEATKSRENNHGSRIDLIVASRDFFETSIAEAAVWSHIKGSDHCPVTIRLRQTNETRICAKRLPSFCIRNMPRFEFRQQSLTSMLPKLEPSRPSCITKHARLRSNINKGFGGQANRNTRRITQSPKKGNEFPAYRKRKERYAQTSLLAFMQAKEHTRPSHGEETTNSVQLSNARESVCEKDGDICLHNGVNSNPSKKASKNQHERELLNQRKVASQAWRKLLSGPPPTPRCR-HGELCVLKKVSKSGENRGRTFFSCRYPAGIGN--AANCNFFQWAPFRAGFE 529
            M+I SWN+NG+++ R  L     SLD+DIICLQETK++   D   E  A VEGY+S+FS  + + GYSGVATFC K   TP  A EG    FCN  G     G                     T+ F  E L  +  EGR V+T H    C        +INVY P        R T+K++F H L+ +  A+ + G  VI+ GD N      D  +P   T L+ + ++P R W    L      ++ +               DSFR  HP   + +TCW  A+ +R+ N+G+RID I+ +R+  E+   ++ +   ++GSDHCPV   ++      I A + P  C + +P F  RQQ L   L K E +  +   + + L    +  F   A+ +T R   S K  +      K   +  Q +LL+F + +        ++ T + + +     +C+K+  +   +   + P+ K +K Q            +  W+ LL GPPP P C+ H E CVL+ V K+G N GR F+ C  P G  +   A CNFF W   +AG E
Sbjct:    1 MKIVSWNINGIRATRVGLKETLDSLDADIICLQETKVTR--DLLDEPSAIVEGYNSYFSFSRVRSGYSGVATFC-KSSTTPQAAEEGLSGVFCNRTGSVGCYGN--------------------TEQFLEEELQSLDQEGRAVLTQHRILNCEDKEETLTVINVYCPRADPEKPERKTYKLRFYHLLQTRAEAILQNGGHVIILGDVNTSHRPLDHCDP---TDLETFEENPGRQWLNQFLGDPIPSQKGDSETVMPPSAGSGLFYDSFRYFHPTQKNAFTCWCSASGARQTNYGTRIDYILGNRELVESEFLDSVIMPEVEGSDHCPVKAFMKCQP---IAANKCPPLCTKYLPEFAGRQQKLLQFLVKKENTLGNTTEESSELTGTPS--FTEGADISTVRKRPSDKLNSTSKKKSKIVTKNGQGNLLSFFKPER-------QKLTMATECNPIEVPICKKEKTV-QKDLQPATPAVKYNKPQ------------TAFWKSLLKGPPPPPNCKGHSEPCVLRTVKKAGPNCGRQFYVCARPEGHSSNPQARCNFFLWLTKKAGCE 516          
BLAST of Gvermi4332.t1 vs. uniprot
Match: F6QX16_XENTR (DNA-(apurinic or apyrimidinic site) endonuclease n=4 Tax=Xenopus tropicalis TaxID=8364 RepID=F6QX16_XENTR)

HSP 1 Score: 235 bits (599), Expect = 3.630e-67
Identity = 180/570 (31.58%), Postives = 260/570 (45.61%), Query Frame = 0
Query:    1 MRITSWNVNGLKSMRP-LAPLFKSLDSDIICLQETKMSGPGDPELESVAFVEGYDSFFSICKQKRGYSGVATFCRKKVATPYDAGEGF----CNAVGGSEINGTEYENIKYSKENRNAEDEHDPTKFFDSETLAIVKDEGRCVITDH---GC------FVLINVYVPAVTVTG--RATFKIQFLHALEAKVNALRRIGRRVIVAGDFNICPSLRDRAEPVLPTALKEWNQSPSRLWFRALLE-------------------RNNMVDSFRELHPHADSVYTCWSEATKSRENNHGSRIDLIVASRDFFETSIAEAAVWSHIKGSDHCPVTIRLRQTNETRICAKRLPSFCIRNMPRFEFRQQSLTSMLPKLEPSRPSCITKHARLRSNINKGFGGQANRNTRRITQSPKKGNEFPAYRKRKER-----YAQTSLLAFMQAKEHTRPSHGEETTNSVQLSNARESVCEKDGDICLHNGVNSNPSKKASKNQHERELLNQRKVASQAWRKLLSGPPPTPRCR-HGELCVLKKVSKSGENRGRTFFSCRYPAGIGN--AANCNFFQWAPFRAG 527
            M+I SWN+NG+++ R  L     SLD+DIICLQETK++   D   E  A VEGY+S+FS  + + GYSGVATFC K   TP+ A EG     CN  G     G                     T+ F  E L  +  EGR V+T H    C        +INVY P        R T+K++F   L+ +  A+ + G  VI+ GD N      D  +P   T L+ + ++P R W    L                         DSFR  HP   + +TCW  A+ +R+ N+G+RID I+ + +  E    ++ +   ++GSDHCPV   ++      I A + P  C + +P F  RQQ L   L K E +  +   + + L        G Q++     I+   K+G++      RK+        Q SLL+F +         G++ T + + + +  S+C+K+  +            K  K        NQ + A   W+ LL GPPP P C+ HGE CVL+ V K+G N GR F+ C  P G      A CNFF W   +AG
Sbjct:    1 MKIVSWNINGIRATRVGLKETLDSLDADIICLQETKVTR--DLLDEPSAIVEGYNSYFSFSRGRSGYSGVATFC-KSSTTPWAAEEGLSGMLCNHTGSIGCYGN--------------------TEEFLEEELQSLDQEGRAVLTQHRIRNCEGKEETLTVINVYCPRADPEKPERKTYKLRFYRLLQTRAEAILQKGGHVIILGDVNTSHRPLDHCDP---TDLETFEENPGRQWLNQFLGDPVPSQKGDSETGTPPSGGSGRFYDSFRYFHPTQRNAFTCWCSASGARQTNYGTRIDYILGNSELVEREFLDSIIMPEVEGSDHCPVKAVMKCRP---IAANKCPPLCTKYLPEFAGRQQKLLQFLMKKENTSGNATEESSEL-------LGSQSSAEGAEISTVRKRGSDKLNGTSRKKNKMGTNIGQGSLLSFFKP-------DGQKLTVAPEHNPSDVSICKKEDTM-----------PKEYKTAPSAVKYNQPQAAF--WKSLLKGPPPPPNCKGHGEPCVLRTVKKAGPNCGRQFYVCARPEGHSTNPQARCNFFLWLTKKAG 514          
BLAST of Gvermi4332.t1 vs. uniprot
Match: UPI0018D5E619 (DNA-(apurinic or apyrimidinic site) endonuclease 2-like isoform X1 n=2 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D5E619)

HSP 1 Score: 233 bits (593), Expect = 5.760e-66
Identity = 177/582 (30.41%), Postives = 261/582 (44.85%), Query Frame = 0
Query:    1 MRITSWNVNGLKSMR-PLAPLFKSLDSDIICLQETKMSGPGDPELESVAFVEGYDSFFSICKQKRGYSGVATFCRKKVATPYDAGEGFCN--AVGGSEINGTEYENIKYSKENRNAEDEHDPTKFFDSETLAIVKDEGRCVITDHGC---------FVLINVYVPAVTVTG--RATFKIQFLHALEAKVNALRRIGRRVIVAGDFNICPSLRDRAEPVLPTALKEWNQSPSRLWFRALLERNN------------------------------------MVDSFRELHPHADSVYTCWSEATKSRENNHGSRIDLIVASRDFFETSIAEAAVWSHIKGSDHCPVTIRLRQTNETRICAKRLPSFCIRNMPRFEFRQQSLTSMLPKLEPSRPSCITK----HARLRSNINKGFGGQANRNTRRITQSPKKGNEFPAYRKRKERYAQTSLLAFMQAK---EHTRPSHGEETTNSVQLSNARESVCEKDGDICLHNGVNSNPSKKASKNQHERELLNQRKV-ASQAWRKLLSGPPPTPRCR-HGELCVLKKVSKSGENRGRTFFSCRYPAGIGN--AANCNFFQW 521
            M I +WN+NG+++ +  +  L  SLD+DI+CLQETK++   D   +S+A V+GY SFFS  +++ GYSGVAT+CR   ATP  A EG     A G  ++         Y  +          T F D E L ++  EGR V+T H            V+INVY P        R  +K+QF + L+ +  AL + GR V+V GD N      D  +P       ++ + PSR W  + L  +                                      VD+FR  HP     +TCWS  T +R+ N+G+RID I A+   FE  IA   +   ++GSDHCPV  R+       + +K+LP  C  NMP F  +QQ L S   KL PS+ +   K      R + N  +     +    +R    P         +       + SL+ F Q K   E    + G    + V+     ++      D+    G  +  S++  +   + +   + K  +S AW++LLSGPP  P C+ H E C+L+ V K G N G+ F+ C  P G  +   A CN F W
Sbjct:    1 MNILTWNINGIRASKVAIKDLLNSLDADIVCLQETKVTR--DLLDDSIANVDGYSSFFSFSRKRSGYSGVATYCRD-CATPVRAEEGLTGRLAKGADDVG-------CYGNQ----------TSFTDEE-LQLLDSEGRAVMTQHTVRDADGISHDLVVINVYCPRADRENQERMDYKLQFYNLLQLRAEALVKAGRHVVVVGDINASHRRIDNCDPG-----PDFEKHPSRQWLTSFLHDDTPEKPASESEASLKLKNDDESSCHKEQPKSSNSSSGIFVDTFRRFHPTRQKAFTCWSTMTGARQTNYGTRIDYIFANMGLFEKMIASCDILPEVEGSDHCPVKARVTCQP---VPSKKLPELCSSNMPEFSGKQQKLLSFFQKLSPSKVALARKPEPDEPRQKDNKTRTMLDLSKPGLKRTGSDPSSQRSQKKLKTNPSELQKGSLMNFFQKKRPPEDVSENKGRTDVDVVKQPELLKATSMPPVDLKAERGNANGGSQEMLETSSQTDGSKRGKTNSSVAWKQLLSGPPQAPTCKGHSESCLLRTVKKPGPNLGKKFYVCPRPEGHKDNPEARCNTFIW 553          
BLAST of Gvermi4332.t1 vs. uniprot
Match: A0A821L913_9NEOB (DNA-(apurinic or apyrimidinic site) endonuclease n=1 Tax=Ranitomeya imitator TaxID=111125 RepID=A0A821L913_9NEOB)

HSP 1 Score: 230 bits (587), Expect = 1.810e-65
Identity = 177/558 (31.72%), Postives = 256/558 (45.88%), Query Frame = 0
Query:    1 MRITSWNVNGLKSMRP-LAPLFKSLDSDIICLQETKMSGPGDPELESVAFVEGYDSFFSICKQKRGYSGVATFCRKKVATPYDAGEGFCNAVGGSEINGTEYENIKYSKENRNAEDEHDPTKFFDSETLAIVKDEGRCVITDH---------GCFVLINVYVPAVTVTG--RATFKIQFLHALEAKVNALRRIGRRVIVAGDFNICPSLRDRAEPVLPTALKEWNQSPSRLWFRALL-------------ERNNMVDSFRELHPHADSVYTCWSEATKSRENNHGSRIDLIVASRDFFETSIAEAAVWSHIKGSDHCPVTIRLRQTNETRICAKRLPSFCIRNMPRFEFRQQSLTSMLPKLEPSRPSCITKHARLRSNINKGFGGQANRNTRRITQSPKKGNEFPAYRKRKERYAQTSLLAFMQAKEHTRPSHGEETTN-SVQLSNARESVCEKDGDICLHNGVNSNPSKKASKNQHERELLNQRKVASQAWRKLLSGPPPTPRCR-HGELCVLKKVSKSGENRGRTFFSCRYPAGIGN--AANCNFFQWAPFRAGFE 529
            M+I SWN+NG+++ R  L  +  SLD+DIICLQETK++   D   E VA VEGY+S+FS  + + GYSGVATFC K   TP  A EG      G  + G +     Y             T+ F  E L  +  EGR VIT H             +INVY P        R T+K++F   L+ +   + +    VI+ GD N      D  +P   T L+ + ++P R W    L                  +DSFR  HP   + +TCW  A+ +R+ N+G+RID I+ +R   E    ++ +   ++GSDHCPV   +R      + A + PS C + +P F  RQQ L+  L K   +      +   L ++ +   G + +   +R T+     N      K   +  Q +LL F       +P   + TT+  V+ + A E+   K    C       N       NQ +          S  W+ LL GPPP P C+ HGE CVL+ V K+G N GR F+ C  P G  +   A CNFF W   ++G +
Sbjct:   11 MKIVSWNINGIRATRVGLKEILDSLDADIICLQETKVTR--DLLEEPVAIVEGYNSYFSFSRVRSGYSGVATFC-KSSTTPLAAEEGL-----GGRLTGQKGSIGCYGD-----------TEEFSEEELLSLDQEGRAVITQHKILTADNKEDTLTVINVYCPRADPEKPERKTYKLRFYRLLQIRAETILKNRGHVIILGDVNTSHKPLDHCDP---TDLEVFEENPGRQWLNQFLVNPDDKTEDSCEPSSRQFLDSFRYFHPTQKNAFTCWCSASGARQTNYGTRIDYILGNRKLVEAEFLDSMIMPEVEGSDHCPVKALMRCGP---LAADKCPSLCTKYLPEFAGRQQKLSQFLVKKNKTLEILADEAKVLSTSQSSTEGSEKSSARKRTTEEVSTNNGKKV--KPVSKGGQGNLLGFF------KPVISKPTTSVDVRNTPASEAQNMKVTAQCAPTSGTQNG------NQQQ----------SAFWKTLLKGPPPPPTCKGHGEPCVLRTVKKAGPNCGRQFYVCARPEGHSSNPQARCNFFLWVNKKSGAD 519          
BLAST of Gvermi4332.t1 vs. uniprot
Match: A0A8D3AN58_SCOMX (DNA-(apurinic or apyrimidinic site) endonuclease n=1 Tax=Scophthalmus maximus TaxID=52904 RepID=A0A8D3AN58_SCOMX)

HSP 1 Score: 227 bits (578), Expect = 2.370e-64
Identity = 172/541 (31.79%), Postives = 241/541 (44.55%), Query Frame = 0
Query:    1 MRITSWNVNGLKSMRP-LAPLFKSLDSDIICLQETKMSGPGDPELESVAFVEGYDSFFSICKQKRGYSGVATFCRKKVATPYDAGEGFCNAVGGSEINGTEYENIKYSKENRNAEDEHDPTKFFDSETLAIVKDEGRCVITDHGCF--------VLINVYVPAVTVTG--RATFKIQFLHALEAKVNALRRIGRRVIVAGDFNICPSLRDRAEPVLPTALKEWNQSPSRLWFRAL----LERNNMVDSFRELHPHADSVYTCWSEATKSRENNHGSRIDLIVASRDFFETSIAEAAVWSHIKGSDHCPVTIRLRQTNETRICAKRLPSFCIRNMPRFEFRQQSLTSMLPKLEPSRPSCITKHARLRSNINKGFGGQANRNTRRITQSPKKGNEFPAYRKRKERYAQTSLLAFMQAKEHTRPSHGEETTNSVQLSNARESVCEKDGDICLHNGVNSNPSKKASKNQHERELLNQRKVASQA--WRKLLSGPPPTPRCR-HGELCVLKKVSKSGENRGRTFFSCRYPAGIGN--AANCNFFQW 521
            M+I +WN+NG+++    +     SLD+D+IC+QETK++   D   E  A V+GY+S+FS  + + GYSGVAT+C K  ATP  A EG    + G E     Y                D T+F   E L ++ +EGR VIT H            +INVY P        R  FK+QF   L+ +  AL + G  VI+ GD N      D  +P   + + ++ ++P R W        +     VD+FR  HP   S +TCWS  T +R+ N+G+RID I A R         A +   ++GSDHCPV  RLR      + + + P  C R +P F  RQQ L+  L K+EP+    +   ++                                         Q SLL+F + K          TTN+V L   R     K      H          A K+  + +     + AS    W+ +L GPPP P C+ HGE CVL+ V K G N G+ FF C  P G  +   A CNFF W
Sbjct:   28 MKIITWNINGIRTFGGGVKKTLDSLDADVICVQETKVTR--DLLDERSAIVDGYNSYFSYSRGRSGYSGVATYC-KDSATPCAAEEGLTGLLTGHEGAVGCY---------------GDHTEF-SGEELQLLDNEGRAVITQHRVMCEDKVQTVTVINVYCPRADPDKPERKQFKLQFYKLLQCRAEALLKDGSHVIILGDVNTSHRPIDHCDP---SDVDQFGENPGRKWLNGTSTDSVRGGKFVDTFRYFHPTRSSAFTCWSTLTGARQTNYGTRIDYIFADRRLVREQFVAADIMPEVEGSDHCPVWGRLRCP---LVPSSKPPPLCTRYLPEFAGRQQKLSRFLVKVEPTSTKTVKTCSK----------------------------------------PQGSLLSFFKPKP---------TTNAVPLLTLRPGSVTKSLRHRTHTKRLQPEKLTADKHDRQAKTPQPDRGASSLVFWKSILHGPPPPPSCKVHGEPCVLRTVKKEGPNMGKQFFVCARPQGHASNPEARCNFFSW 494          
The following BLAST results are available for this feature:
BLAST of Gvermi4332.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IPC3_9FLOR1.420e-21158.60DNA-(apurinic or apyrimidinic site) endonuclease n... [more]
R7QRZ1_CHOCR9.510e-14847.48DNA-(apurinic or apyrimidinic site) endonuclease n... [more]
UPI001E1DBD9F4.510e-8746.13DNA-(apurinic or apyrimidinic site) endonuclease 2... [more]
UPI001ABECA821.480e-6932.86DNA-(apurinic or apyrimidinic site) endonuclease 2... [more]
A0A8D3DH26_SCOMX5.970e-6832.75DNA-(apurinic or apyrimidinic site) endonuclease n... [more]
Q6DDT4_XENLA1.100e-6731.57DNA-(apurinic or apyrimidinic site) endonuclease n... [more]
F6QX16_XENTR3.630e-6731.58DNA-(apurinic or apyrimidinic site) endonuclease n... [more]
UPI0018D5E6195.760e-6630.41DNA-(apurinic or apyrimidinic site) endonuclease 2... [more]
A0A821L913_9NEOB1.810e-6531.72DNA-(apurinic or apyrimidinic site) endonuclease n... [more]
A0A8D3AN58_SCOMX2.370e-6431.79DNA-(apurinic or apyrimidinic site) endonuclease n... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 96..116
NoneNo IPR availablePANTHERPTHR22748:SF4DNA-(APURINIC OR APYRIMIDINIC SITE) LYASE 2coord: 1..515
IPR010666Zinc finger, GRF-typePFAMPF06839zf-GRFcoord: 477..522
e-value: 3.1E-12
score: 46.4
IPR004808AP endonuclease 1TIGRFAMTIGR00633TIGR00633coord: 132..298
e-value: 7.8E-31
score: 105.4
IPR004808AP endonuclease 1PANTHERPTHR22748AP ENDONUCLEASEcoord: 1..515
IPR004808AP endonuclease 1PROSITEPS51435AP_NUCLEASE_F1_4coord: 1..300
score: 37.961094
IPR005135Endonuclease/exonuclease/phosphatasePFAMPF03372Exo_endo_phoscoord: 5..291
e-value: 7.4E-19
score: 68.3
IPR036691Endonuclease/exonuclease/phosphatase superfamilyGENE3D3.60.10.10Endonuclease/exonuclease/phosphatasecoord: 1..301
e-value: 1.4E-81
score: 276.6
IPR036691Endonuclease/exonuclease/phosphatase superfamilySUPERFAMILY56219DNase I-likecoord: 1..298
IPR020848AP endonuclease 1, conserved sitePROSITEPS00728AP_NUCLEASE_F1_3coord: 258..269

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_147contigScGOVlb_147:1260785..1262380 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi4332.t1Gvermi4332.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_147 1260785..1262380 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi4332.t1 ID=Gvermi4332.t1|Name=Gvermi4332.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=532bp
MRITSWNVNGLKSMRPLAPLFKSLDSDIICLQETKMSGPGDPELESVAFV
EGYDSFFSICKQKRGYSGVATFCRKKVATPYDAGEGFCNAVGGSEINGTE
YENIKYSKENRNAEDEHDPTKFFDSETLAIVKDEGRCVITDHGCFVLINV
YVPAVTVTGRATFKIQFLHALEAKVNALRRIGRRVIVAGDFNICPSLRDR
AEPVLPTALKEWNQSPSRLWFRALLERNNMVDSFRELHPHADSVYTCWSE
ATKSRENNHGSRIDLIVASRDFFETSIAEAAVWSHIKGSDHCPVTIRLRQ
TNETRICAKRLPSFCIRNMPRFEFRQQSLTSMLPKLEPSRPSCITKHARL
RSNINKGFGGQANRNTRRITQSPKKGNEFPAYRKRKERYAQTSLLAFMQA
KEHTRPSHGEETTNSVQLSNARESVCEKDGDICLHNGVNSNPSKKASKNQ
HERELLNQRKVASQAWRKLLSGPPPTPRCRHGELCVLKKVSKSGENRGRT
FFSCRYPAGIGNAANCNFFQWAPFRAGFEPT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010666Znf_GRF
IPR004808AP_endonuc_1
IPR005135Endo/exonuclease/phosphatase
IPR036691Endo/exonu/phosph_ase_sf
IPR020848AP_endonuclease_F1_CS