Gvermi4296.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi4296.t1
Unique NameGvermi4296.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length530
Homology
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BLAST of Gvermi4296.t1 vs. uniprot
Match: A0A2V3J104_9FLOR (Protein sel-1-like n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J104_9FLOR)

HSP 1 Score: 342 bits (876), Expect = 7.050e-108
Identity = 321/483 (66.46%), Postives = 383/483 (79.30%), Query Frame = 0 
Query:   41 EFYDRNSLTQEAEALLKKDISPYSDDAK--QVLKLLENAVSQGSPRAKTLLGSMFREGFILDENRDEAXXXXXXXXXXXXXXXXXXXXALKLQVVNEKRVHGMRDDVTHTDFSVDMNEQGEARGVLHVETKHGALVDAPKPAELVRRVRKARRKAGFTDQQALEFEDFKKREQEQALAEERHKAISWLQRAAQQGNDEALVVLGNEILHEDPKRAIELYEAAIKKGHNVDAYYNLGQIYTKGLGSIAPDEKEALKNFAMAAQLGDPSAQFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHGFGTNEDRHQAFLLYQKXXXXXXXXXXXXXXXXXXXXXXVPSNKKVAEHFLKIAEERETDAQKSDELHLQTPVASAEAPKHPMADIPRPKLESE 521
            EF+D+NS  QEAE LL +  +  S + +  + L+LL+ AVSQ SPRAKTLLGSMFREG I++++R +A                    AL+L V+ +++   +RD VTHT+F+VD++++GE RG L +E +   + DAPKPAELVRRVRKARRKAGFTDQ++ E+E+F +RE+E  L E+R  A+SWL++AA+ GNDEA+V+LGNE+L +DP RAIELYE+AI+ GHN DAYYNLGQIYTKG GS+ PD K ALKNFAMAAQLGDPSAQFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                     HGFGT E++H+AFLLYQ+ XXXXXXXXXXXXXXXXXXXXX  +NKK++E+F ++AEER++D QK DE+HLQTPV   +APKHPMADIPRP  E+E
Sbjct:   54 EFHDQNSSAQEAERLLTEPNASDSFEGRAGRALELLQVAVSQDSPRAKTLLGSMFREGLIVEQDRAKAERLFEEAAAEGDPVAQCSLGALQLDVLKQEKAAEIRDKVTHTEFAVDVDDKGEIRGRLQMEVEGLPMTDAPKPAELVRRVRKARRKAGFTDQESREYEEFVRREREGQLVEKRRIAMSWLEKAAEHGNDEAMVILGNEVLDDDPDRAIELYESAIRSGHNTDAYYNLGQIYTKGHGSVQPDPKIALKNFAMAAQLGDPSAQFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFLEAGRLGEAEALCSAAAMHFHGFGTPEEQHEAFLLYQRAXXXXXXXXXXXXXXXXXXXXXXXANKKLSEYFFRVAEERDSDNQKRDEIHLQTPVEKTDAPKHPMADIPRPDKEAE 536
The following BLAST results are available for this feature:
BLAST of Gvermi4296.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J104_9FLOR7.050e-10866.46Protein sel-1-like n=1 Tax=Gracilariopsis chorda T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006597Sel1-like repeatSMARTSM00671sel1coord: 267..303
e-value: 3.3E-7
score: 39.9
coord: 378..414
e-value: 0.12
score: 21.5
coord: 83..118
e-value: 0.0016
score: 27.7
coord: 415..450
e-value: 9.2E-7
score: 38.5
coord: 304..340
e-value: 4.1E-5
score: 33.0
coord: 341..377
e-value: 11.0
score: 13.2
coord: 451..486
e-value: 0.084
score: 22.0
IPR006597Sel1-like repeatPFAMPF08238Sel1coord: 304..340
e-value: 0.0013
score: 19.3
coord: 249..265
e-value: 2.0
score: 9.2
coord: 453..481
e-value: 0.18
score: 12.5
coord: 268..303
e-value: 4.4E-6
score: 27.2
coord: 343..362
e-value: 84.0
score: 4.1
coord: 220..234
e-value: 0.17
score: 12.7
coord: 415..450
e-value: 2.5E-4
score: 21.6
coord: 384..413
e-value: 0.83
score: 10.4
coord: 87..118
e-value: 0.069
score: 13.9
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 19..134
e-value: 2.1E-13
score: 52.6
coord: 365..497
e-value: 4.0E-30
score: 107.6
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 209..364
e-value: 2.5E-34
score: 120.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 483..529
NoneNo IPR availablePANTHERPTHR43628:SF9SEL1-REPEAT-CONTAINING PROTEIN YBEQcoord: 368..481
coord: 214..305
coord: 303..395
NoneNo IPR availablePANTHERPTHR43628ACTIVATOR OF C KINASE PROTEIN 1-RELATEDcoord: 64..128
NoneNo IPR availablePANTHERPTHR43628ACTIVATOR OF C KINASE PROTEIN 1-RELATEDcoord: 368..481
coord: 214..305
coord: 303..395
NoneNo IPR availablePANTHERPTHR43628:SF9SEL1-REPEAT-CONTAINING PROTEIN YBEQcoord: 64..128
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 286..485
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 64..131
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 218..282

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_147contigScGOVlb_147:1070816..1072405 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi4296.t1Gvermi4296.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_147 1070816..1072405 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi4296.t1 ID=Gvermi4296.t1|Name=Gvermi4296.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=530bp
MIPYLFLRSLTISRNKFGTVYRNFVCSSSTKSSELLQNTTEFYDRNSLTQ
EAEALLKKDISPYSDDAKQVLKLLENAVSQGSPRAKTLLGSMFREGFILD
ENRDEAMRLFDEAAEQGDPKAQCSLGALKLQVVNEKRVHGMRDDVTHTDF
SVDMNEQGEARGVLHVETKHGALVDAPKPAELVRRVRKARRKAGFTDQQA
LEFEDFKKREQEQALAEERHKAISWLQRAAQQGNDEALVVLGNEILHEDP
KRAIELYEAAIKKGHNVDAYYNLGQIYTKGLGSIAPDEKEALKNFAMAAQ
LGDPSAQFYLGHLYRVGTKEVKVDLASARQYIEMAAAQEHPGAIYYLALM
HRNGEGGLEVSQGAFHRYVNKAASLDHGPAHVCLAEMHYTGSDGMDIDYP
KALKHFHTAGDLGEPEAYCSAAAMHFHGFGTNEDRHQAFLLYQKAAELGS
TQALRNIGSMYFHGHGVPSNKKVAEHFLKIAEERETDAQKSDELHLQTPV
ASAEAPKHPMADIPRPKLESETPIGDPLQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006597Sel1-like
IPR011990TPR-like_helical_dom_sf