Gvermi4295.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi4295.t1
Unique NameGvermi4295.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length178
Homology
BLAST of Gvermi4295.t1 vs. uniprot
Match: A0A2V3J3W9_9FLOR (Vacuolar protein-sorting-associated protein 25 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J3W9_9FLOR)

HSP 1 Score: 323 bits (829), Expect = 1.600e-111
Identity = 147/177 (83.05%), Postives = 162/177 (91.53%), Query Frame = 0
Query:    1 MSDYHFPPFHSFPPSFTRQPIDETRAKQTELWCDLIRDYCRAKRIFWLDVSKARESSLFYNPAIDRRLSDEDIHYFLGQLVGKGDAVWDPDRKRCLVFWRRPSAWGELIYQWVENTGRNGQILTVHEIRKGSATIGYEFHDLELDTTMKALQALEAIGKCIIIRGDEDDGLGVKFVS 177
            MSD+ FPPF+SFPPSFTRQPI+ TRAKQTELWC+LIRDYCR KRIFWLDVSKA+ES+LF NPAIDRRLSDEDI YFL QLV +GDA WDPDRKRCLVFWR PS WGE+IYQWVE TGRNGQ+LTVHEIRKGSATIGYEFHDLELDTT+K+LQAL  IGKC +++GD DDGLGVKFV+
Sbjct:    1 MSDFDFPPFYSFPPSFTRQPIEATRAKQTELWCNLIRDYCRVKRIFWLDVSKAKESNLFANPAIDRRLSDEDIQYFLSQLVARGDAQWDPDRKRCLVFWRGPSEWGEMIYQWVEKTGRNGQLLTVHEIRKGSATIGYEFHDLELDTTIKSLQALAVIGKCALVKGDSDDGLGVKFVN 177          
BLAST of Gvermi4295.t1 vs. uniprot
Match: R7QAD2_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QAD2_CHOCR)

HSP 1 Score: 303 bits (775), Expect = 2.720e-103
Identity = 135/175 (77.14%), Postives = 156/175 (89.14%), Query Frame = 0
Query:    1 MSDYHFPPFHSFPPSFTRQPIDETRAKQTELWCDLIRDYCRAKRIFWLDVSKARESSLFYNPAIDRRLSDEDIHYFLGQLVGKGDAVWDPDRKRCLVFWRRPSAWGELIYQWVENTGRNGQILTVHEIRKGSATIGYEFHDLELDTTMKALQALEAIGKCIIIRGDEDDGLGVKF 175
            M+ Y FPPFHSFPPS+TRQP++ TRAKQT+LWCDLIRDYCR   IFWLDVS ARES+LF NPAIDRRLSD+D+ YFLGQLV +GDA WDPDRKRCLVFWR+PS WG+LIYQWV+ TG+NG++LTVHEIRKGSAT+G EFH LELDTT++ALQALEA+GKC I++GD  D LGVKF
Sbjct:    1 MAQYVFPPFHSFPPSYTRQPVEATRAKQTQLWCDLIRDYCRVHHIFWLDVSVARESNLFSNPAIDRRLSDDDVRYFLGQLVARGDAEWDPDRKRCLVFWRQPSDWGQLIYQWVDATGKNGELLTVHEIRKGSATVGREFHGLELDTTIRALQALEALGKCAIVQGDSADSLGVKF 175          
BLAST of Gvermi4295.t1 vs. uniprot
Match: A0A7S3E7W9_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3E7W9_9RHOD)

HSP 1 Score: 214 bits (545), Expect = 2.670e-68
Identity = 99/169 (58.58%), Postives = 124/169 (73.37%), Query Frame = 0
Query:    1 MSDYHFPPFHSFPPSFTRQPIDETRAKQTELWCDLIRDYCRAKRIFWLDVSKARESSLFYNPAIDRRLSDEDIHYFLGQLVGKGDAVWDPDRKRCLVFWRRPSAWGELIYQWVENTGRNGQILTVHEIRKGSATIGYEFHDLELDTTMKALQALEAIGKCIIIRGDEDD 169
            +S++ FP F+SFPPSFTRQPI  TR KQ  LW DLIRDYC+  RIFWLDV++A  S LF N A+ RRLS ED  +FLG+LV +GDA WD +++RCL++WRRP+ WG LIY WVE+ GRNG ++TV+EIR G  T G EF +LELD T+KAL  LE  GK  +   +  D
Sbjct:    7 VSEFKFPAFYSFPPSFTRQPIPATREKQIRLWGDLIRDYCQHYRIFWLDVAQAAASPLFNNKAVSRRLSLEDARFFLGELVSRGDAEWDQNQQRCLIYWRRPAEWGGLIYDWVESVGRNGTVMTVYEIRLGEETKGEEFFNLELDLTLKALADLELSGKAAVFGTERSD 175          
BLAST of Gvermi4295.t1 vs. uniprot
Match: A0A7S0ZGH4_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZGH4_9RHOD)

HSP 1 Score: 210 bits (535), Expect = 1.270e-66
Identity = 90/170 (52.94%), Postives = 118/170 (69.41%), Query Frame = 0
Query:    4 YHFPPFHSFPPSFTRQPIDETRAKQTELWCDLIRDYCRAKRIFWLDVSKARESSLFYNPAIDRRLSDEDIHYFLGQLVGKGDAVWDPDRKRCLVFWRRPSAWGELIYQWVENTGRNGQILTVHEIRKGSATIGYEFHDLELDTTMKALQALEAIGKCIIIRGDEDDGLGV 173
            +HFP FHSF P++T+QP+  T  KQT LWCDL  DYCR   + WLD+ KA   SLF NP+I RR+  ED+ YFLG LV +GDA+WD  R RCLVFWRRP  WG++IY+W+E TG NG ++TV+E+R    T    FH L+L+  + AL ALE+ GK  +  G++ D +GV
Sbjct:   17 FHFPAFHSFAPAYTKQPVKSTLQKQTALWCDLTLDYCRHYNVLWLDIVKATNCSLFVNPSIARRMRGEDVAYFLGALVERGDAIWDASRSRCLVFWRRPEEWGDIIYRWIEATGNNGSLMTVYELRLSETTRNEPFHALDLEMMLLALSALESTGKAALFSGEKSDSVGV 186          
BLAST of Gvermi4295.t1 vs. uniprot
Match: A0A5J4YWD2_PORPP (Vacuolar protein-sorting-associated protein 25 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YWD2_PORPP)

HSP 1 Score: 190 bits (483), Expect = 8.560e-59
Identity = 83/178 (46.63%), Postives = 121/178 (67.98%), Query Frame = 0
Query:    2 SDYHFPPFHSFPPSFTRQPIDETRAKQTELWCDLIRDYCRAKRIFWLDVSKARESSLFYNPAIDRRLSDEDIHYFLGQLVGKGDAVWDPD---RKRCLVFWRRPSAWGELIYQWVENTGRNGQILTVHEIRKGSATIGYEFHDLELDTTMKALQALEAIGKCIIIRGDEDDGLGVKFV 176
            S +HFP FH+FPPS+TRQP+  TR KQ  LWCDL+  +C+ +  FW+D+++  +S LF N AI+RR+  ED+ +   +LV +GDA WD     + RCLVFWR P+ WG+L+Y +++ TG+N  ++T++E+R    T G  FH+L+LD  + ALQ+LE   K  I  G + D LGVKF+
Sbjct:    4 SAFHFPAFHAFPPSYTRQPVRATREKQVSLWCDLMLAFCKHRGDFWVDMAEITQSELFVNAAINRRMKGEDVVFLFDELVNRGDAQWDVQGAGKTRCLVFWRSPAEWGDLVYTYIDRTGQNNSVMTLYELRCSDMTKGEPFHNLDLDLMLLALQSLELANKAAIFEGAKSDQLGVKFL 181          
BLAST of Gvermi4295.t1 vs. uniprot
Match: M2XPN1_GALSU (ESCRT-II complex subunit VPS25 isoform 1 n=2 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XPN1_GALSU)

HSP 1 Score: 174 bits (440), Expect = 2.530e-52
Identity = 80/176 (45.45%), Postives = 113/176 (64.20%), Query Frame = 0
Query:    1 MSDYHFPPFHSFPPSFTRQPIDETRAKQTELWCDLIRDYCRAKRIFWLDVSKARESSLFYNPAIDRRLSDEDIHYFLGQLVGKGDAVW-DPDRKRCLVFWRRPSAWGELIYQWVENTGRNGQILTVHEIRKGSATIGYEFHDLELDTTMKALQALEAIGKCIIIRGDEDDGLGVKF 175
            M+ + +PPF+S+PPSFT QP+  TR KQ +LWCDL+  YC+  +IF L V+ +  SSLF N AIDR+LS   +     +LV  G   W + +   CL++WRRP  W E+IY WVE +G+   ILT +EIR    T  +EFH ++ +  +++LQ LE+ GKC +  G  +D LGVKF
Sbjct:    1 MTVFRYPPFYSYPPSFTLQPVKATREKQLKLWCDLVLSYCKHYKIFKLSVTDSANSSLFANTAIDRKLSLAAVEEVFSRLVSMGYGEWLNKEANVCLIYWRRPYEWAEIIYDWVERSGKRKSILTFYEIRFSEDTAEFEFHGIDPELLLRSLQVLESQGKCAVFEGKTNDDLGVKF 176          
BLAST of Gvermi4295.t1 vs. uniprot
Match: A0A507EGN5_9FUNG (Uncharacterized protein n=1 Tax=Powellomyces hirtus TaxID=109895 RepID=A0A507EGN5_9FUNG)

HSP 1 Score: 147 bits (370), Expect = 1.080e-41
Identity = 71/178 (39.89%), Postives = 108/178 (60.67%), Query Frame = 0
Query:    1 MSDYHFPPFHSFPPSFTRQPIDETRAKQTELWCDLIRDYCRAKRIFWLDVSKARE--SSLFYNPAIDRRLSDEDIHYFLGQLVGKGDAVWD-PDRKRCLVFWRRPSAWGELIYQWVENTGRNGQILTVHEIRKGSATIGYEFHDLELDTTMKALQALEAIGKCIIIRGDEDDGLGVKF 175
            MS+Y FP  HSFPP +T QP   TRAKQ +LW +++  YC A R   + ++   +  +++F N  I RRL  E I   + +L+ +G A WD P + +CL+FWR+P  W  +I++W  ++G    I T++E+  G  T+G +FHDL+  T ++AL+AL   GK  +  G  D  +GVKF
Sbjct:    1 MSNYTFPSIHSFPPFYTLQPTLATRAKQLQLWGEILLQYCIATRTSAIHIATNSKDAAAVFSNDKIRRRLDRESIQAVIEELIKQGHADWDSPAKDQCLIFWRKPEEWAAIIHKWAFDSGATNSICTIYELLHGDDTVGLDFHDLDERTMVRALEALAKSGKAQVFVGATDSEMGVKF 178          
BLAST of Gvermi4295.t1 vs. uniprot
Match: S4R6R2_PETMA (Vacuolar protein-sorting-associated protein 25 n=2 Tax=Petromyzon marinus TaxID=7757 RepID=S4R6R2_PETMA)

HSP 1 Score: 146 bits (369), Expect = 1.520e-41
Identity = 74/176 (42.05%), Postives = 108/176 (61.36%), Query Frame = 0
Query:    4 YHFPPFHSFPPSFTRQPIDETRAKQTELWCDLIRDYCRAKRIFWLDVSKARESSLFYNPAIDR---RLSDEDIHYFLGQLVGKGDAVW-DPDRKRCLVFWRRPSAWGELIYQWVENTGRNGQILTVHEIRKGSATIGYEFHDLELDTTMKALQALEAIGKCIIIRGDEDDGLGVKF 175
            + FP  H FPP +T QP  +TR KQ   WC L+ DYCRA+RIF +DV + ++S+LF+N  I R   +LS E I+  + +L  +G   W D  R RCL+ WRRP  WG+LI+QWV  +G +  + T++E+  G  T   EFH L+    ++AL++L+  G+  ++     DG GVKF
Sbjct:    5 FSFPWQHRFPPFYTLQPNADTRQKQLSAWCSLVLDYCRAERIFTMDVLEVQDSALFHNKTIHRIAGKLSLEMINIIMDELRKRGSVEWQDKTRTRCLIMWRRPEEWGKLIHQWVMKSGMSNTVCTLYELTHGEDTAREEFHGLDEWLLLRALESLQEEGRAEVM--SIGDGKGVKF 178          
BLAST of Gvermi4295.t1 vs. uniprot
Match: A0A2P6N2V3_9EUKA (Uncharacterized protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6N2V3_9EUKA)

HSP 1 Score: 145 bits (367), Expect = 2.720e-41
Identity = 70/180 (38.89%), Postives = 109/180 (60.56%), Query Frame = 0
Query:    1 MSDYHFPPFHSFPPSFTRQPIDETRAKQTELWCDLIRDYCRAKRIFWLDVSKARESS--LFYNPAIDRRLSDEDIHYFLGQLVGKGDAVWDP-DRKRCLVFWRRPSAWGELIYQWVENTGRNGQILTVHEIRKGSATIGYEFHDLELDTTMKALQALEAIGKCIIIRGDEDDGLGVKFVS 177
            M+ +HFP F+  PP+FT QP+  TR KQ ++W  L+ DYC+  + + LD+ +   S   LF+NP I+R LS  D      ++V +G+  W+  ++KR  + WR+P  W  +IY+WV + G+   ILT++EI++G  + G EFH L+    +KAL  LE   +  I  G+ ++ LGVKF S
Sbjct:    1 MTSFHFPAFYELPPTFTLQPVLNTRRKQLDMWAGLVLDYCKYHKKYSLDLEEELRSKDGLFHNPRIERILSIFD------EIVSRGNGEWETKEKKRLTIHWRKPEEWASMIYRWVNDRGQTDAILTLYEIQQGDDSAGEEFHGLDTKVLIKALTCLEKQNRAQIFSGNNNEDLGVKFFS 174          
BLAST of Gvermi4295.t1 vs. uniprot
Match: A0A484KPN4_9ASTE (Uncharacterized protein n=2 Tax=Cuscuta sect. Cleistogrammica TaxID=1824901 RepID=A0A484KPN4_9ASTE)

HSP 1 Score: 144 bits (364), Expect = 8.690e-41
Identity = 75/174 (43.10%), Postives = 104/174 (59.77%), Query Frame = 0
Query:    3 DYHFPPFHSFPPSFTRQPIDETRAKQTELWCDLIRDYCRAKRIFWLDVSKARESSLFYNPAIDRRLSDEDIHYFLGQLVGKGDAVW-DPDRKRCLVFWRRPSAWGELIYQWVENTGRNGQILTVHEIRKGSATIGYEFHDLELDTTMKALQALEAIGKCIIIRGDEDDGLGVKF 175
            ++  PPF S+PP FT QP+ ETR KQT+LW +LI DYC++++IF + + +  +  LF NPAI+R LS E    FL  LV  G A W D   ++CL+ W R   W E+I Q+V+  G    ++TV EIR G+ + G     L+    M+AL+ LE  GK  I +G   D  GVKF
Sbjct:    6 EFKRPPFFSYPPYFTLQPVRETREKQTQLWKELIIDYCKSQKIFVIGLEE--DFPLFSNPAIERSLSHEAKETFLSALVSDGRAEWMDKGHRKCLILWHRIQDWAEIIVQFVKENGLEDSVMTVEEIRSGTESRGTNLDGLDRTILMRALKLLENKGKLAIFKGTSADDEGVKF 177          
The following BLAST results are available for this feature:
BLAST of Gvermi4295.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J3W9_9FLOR1.600e-11183.05Vacuolar protein-sorting-associated protein 25 n=1... [more]
R7QAD2_CHOCR2.720e-10377.14Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A7S3E7W9_9RHOD2.670e-6858.58Hypothetical protein (Fragment) n=1 Tax=Rhodosorus... [more]
A0A7S0ZGH4_9RHOD1.270e-6652.94Hypothetical protein (Fragment) n=1 Tax=Timspurcki... [more]
A0A5J4YWD2_PORPP8.560e-5946.63Vacuolar protein-sorting-associated protein 25 n=1... [more]
M2XPN1_GALSU2.530e-5245.45ESCRT-II complex subunit VPS25 isoform 1 n=2 Tax=G... [more]
A0A507EGN5_9FUNG1.080e-4139.89Uncharacterized protein n=1 Tax=Powellomyces hirtu... [more]
S4R6R2_PETMA1.520e-4142.05Vacuolar protein-sorting-associated protein 25 n=2... [more]
A0A2P6N2V3_9EUKA2.720e-4138.89Uncharacterized protein n=1 Tax=Planoprotostelium ... [more]
A0A484KPN4_9ASTE8.690e-4143.10Uncharacterized protein n=2 Tax=Cuscuta sect. Clei... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008570ESCRT-II complex, Vps25 subunitPFAMPF05871ESCRT-IIcoord: 10..143
e-value: 5.9E-45
score: 153.0
IPR008570ESCRT-II complex, Vps25 subunitPANTHERPTHR13149VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS25coord: 4..176
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 99..176
e-value: 7.4E-23
score: 82.1
IPR014041ESCRT-II complex, Vps25 subunit, N-terminal winged helixGENE3D1.10.10.570coord: 1..98
e-value: 2.8E-30
score: 106.6
NoneNo IPR availablePANTHERPTHR13149:SF0VACUOLAR PROTEIN-SORTING-ASSOCIATED PROTEIN 25coord: 4..176
IPR036390Winged helix DNA-binding domain superfamilySUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 5..105
IPR036390Winged helix DNA-binding domain superfamilySUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 100..175

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_147contigScGOVlb_147:1069790..1070477 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi4295.t1Gvermi4295.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_147 1069790..1070477 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi4295.t1 ID=Gvermi4295.t1|Name=Gvermi4295.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=178bp
MSDYHFPPFHSFPPSFTRQPIDETRAKQTELWCDLIRDYCRAKRIFWLDV
SKARESSLFYNPAIDRRLSDEDIHYFLGQLVGKGDAVWDPDRKRCLVFWR
RPSAWGELIYQWVENTGRNGQILTVHEIRKGSATIGYEFHDLELDTTMKA
LQALEAIGKCIIIRGDEDDGLGVKFVS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008570ESCRT-II_cplx_Vps25-sub
IPR036388WH-like_DNA-bd_sf
IPR014041ESCRT-II_cplx_Vps25-sub_N
IPR036390WH_DNA-bd_sf