Gvermi4241.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi4241.t1
Unique NameGvermi4241.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length514
Homology
BLAST of Gvermi4241.t1 vs. uniprot
Match: A0A2V3J1F2_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J1F2_9FLOR)

HSP 1 Score: 575 bits (1481), Expect = 7.030e-200
Identity = 358/518 (69.11%), Postives = 404/518 (77.99%), Query Frame = 0
Query:    1 MDTIDADIAWEECIPDLPLDTNNLPPLHALSTDSSQDIDLLDLLSFDSDKTSDAVANPERLPSVESLSKSSKPLCLSPESFIQSQETVSQCSEHSTMAPILTPQPHMVHLPSDQSTVGSRISSPSRTEATETPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSIVLELTTRLTSAGAEAAALRKRVASLSQENRALRAALDHANARLVAVAQAAAAAPPPTAQHAQPVVVGLAQISQEVAGRISGALTVNDVEEAPKKKRKRVTGAATTMACVMFMWGALFGTPGLLKAATDVFGGEESNLPAVWKGRSDAVLNVPAVPVARVQESWQPHCMTVLKELPSKSTDEGEEEMDVYP--VIKEEEVVLNEDTENKEEI---SAEKMFVDMRDEDSAKVVALADVRDRSQPQYSYVLCRDAEAAIDNIRACSESKKRGEECGPPHTISLILPASTAGMEDENNTDSLPALAEVQCNIMSIARIPVDSMTDGNSFGKVIATVPQSGTVIRG 513
            MD ID +IAWEECIPDLPLDTNNLPPL+ALS       DLLDLL+FDSDK  D+V  P +LPS ESL+ S+ PL L+ +SF                   L     +V LPSD STVGSRISSPS T   + PS        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX DS+VLELTTRLTSAGAEA ALRKRVASL+QENR+LRAALDHANARLVAVAQAA            P+VVGLAQ+SQEVAGRISGALTVNDVEEAPKKKRKRVTGAATTMACVMFMWGA  GTPGLLKAA++VFGG+ SNLPA+WKG S A   VPAVP   +QE WQP CM+VLKELP KS+++ EE        + K+E +V+ E+   K +I   SAEKMFVDMRDED+AKVVALAD R ++QPQYSYVLCRDA+AAI +I+ACSESKKRGE CGPPHTISLILPA+TAGMEDEN+TDS+PALAEVQC+IMS+ARIP  S+ + NS+G+VIATVPQSGTVI G
Sbjct:    1 MDKIDVNIAWEECIPDLPLDTNNLPPLNALSNGLPNHPDLLDLLNFDSDKNIDSVTTPGKLPSPESLTTSTAPLNLTTDSFXXXXXXXXXXXXXXXXXXXLLSPQFIVELPSDNSTVGSRISSPSHTSFEQLPSPQQSAPASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKDSLVLELTTRLTSAGAEATALRKRVASLTQENRSLRAALDHANARLVAVAQAAXXX---XXXXQPPIVVGLAQMSQEVAGRISGALTVNDVEEAPKKKRKRVTGAATTMACVMFMWGAFVGTPGLLKAASNVFGGDNSNLPAIWKGNSGAPSAVPAVPAPHMQEGWQPSCMSVLKELPDKSSEDDEETNQHQDGGLAKDEPLVV-EEKPTKMDIDVSSAEKMFVDMRDEDAAKVVALADFRGQAQPQYSYVLCRDAQAAIGSIKACSESKKRGEPCGPPHTISLILPAATAGMEDENDTDSMPALAEVQCSIMSVARIPTPSVNNDNSYGRVIATVPQSGTVIHG 514          
BLAST of Gvermi4241.t1 vs. uniprot
Match: R7QEB9_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QEB9_CHOCR)

HSP 1 Score: 217 bits (553), Expect = 6.570e-63
Identity = 137/299 (45.82%), Postives = 179/299 (59.87%), Query Frame = 0
Query:  238 QPVVVGLAQISQEVAGRISGALTVNDVEEAP---------KKKRKRVTGAATTMACVMFMWGALFGTPGLLKAATDVFGGEESNLPAVWKGRSDAVLNVPAVP-----VARVQESWQPHCMTVLKELPSKSTDEGEEEMDVYPVIKEEEVVLNE----DTENKE-------EISAEKMFVDMRDEDSAKVVALADVRDRSQPQYSYVLCRDAEAAIDNIRACSESKKRGEECGPPHTISLILPASTAGMEDENNTDSLPA--LAEVQCNIMSIARIP-----VDSMTDGNS-FGKVIAT 503
            QPV++GL Q+  +VA R+   LTV+  + AP         +KKRKR+ GAATTMACVMFMWGA  GTPGLLK +       + NLPAVW            +P      A    SWQP+CM VL++LP      G+E  D+ P  K+E ++ +     DT+ +E       +  A KMFVDM DE++A VVA AD  +   P+YSYVL RDA AA+D+I++C    + G  CG PH+ISLILPAS AG+E++ N     +  LAEVQC +MS+ARIP     V+  T GNS +GKVIAT
Sbjct:   27 QPVMLGLTQVPSDVASRLGSVLTVSSAD-APSVSTDDPRERKKRKRMAGAATTMACVMFMWGAFVGTPGLLKGSASYR--SDGNLPAVWTSTPTDTAVARVMPNRRPHSAEPDHSWQPNCMRVLEQLPH-----GKE--DLEPSTKDEPIIADPATDLDTQRQEPREDKDIDTEANKMFVDMADENAASVVARADDTEAVIPEYSYVLIRDAVAAMDSIKSCRHRLRHGNHCGQPHSISLILPASAAGLEEDVNDTQRGSIQLAEVQCTVMSVARIPSNAATVNKATPGNSNYGKVIAT 315          
The following BLAST results are available for this feature:
BLAST of Gvermi4241.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J1F2_9FLOR7.030e-20069.11Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QEB9_CHOCR6.570e-6345.82Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 184..218
NoneNo IPR availableCOILSCoilCoilcoord: 368..388
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 108..137
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 86..174

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_147contigScGOVlb_147:876491..878032 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi4241.t1Gvermi4241.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_147 876491..878032 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi4241.t1 ID=Gvermi4241.t1|Name=Gvermi4241.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=514bp
MDTIDADIAWEECIPDLPLDTNNLPPLHALSTDSSQDIDLLDLLSFDSDK
TSDAVANPERLPSVESLSKSSKPLCLSPESFIQSQETVSQCSEHSTMAPI
LTPQPHMVHLPSDQSTVGSRISSPSRTEATETPSPQQSAPASPQPAKRPS
PNKPRQRRQRRSGKKKESESNSNDSIVLELTTRLTSAGAEAAALRKRVAS
LSQENRALRAALDHANARLVAVAQAAAAAPPPTAQHAQPVVVGLAQISQE
VAGRISGALTVNDVEEAPKKKRKRVTGAATTMACVMFMWGALFGTPGLLK
AATDVFGGEESNLPAVWKGRSDAVLNVPAVPVARVQESWQPHCMTVLKEL
PSKSTDEGEEEMDVYPVIKEEEVVLNEDTENKEEISAEKMFVDMRDEDSA
KVVALADVRDRSQPQYSYVLCRDAEAAIDNIRACSESKKRGEECGPPHTI
SLILPASTAGMEDENNTDSLPALAEVQCNIMSIARIPVDSMTDGNSFGKV
IATVPQSGTVIRG*
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