Gvermi4233.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male
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Overview
Homology
BLAST of Gvermi4233.t1 vs. uniprot
Match: A0A2V3J1B1_9FLOR (High mobility group B protein 13 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J1B1_9FLOR) HSP 1 Score: 351 bits (901), Expect = 1.760e-114 Identity = 215/399 (53.88%), Postives = 269/399 (67.42%), Query Frame = 0
Query: 55 AEPVEETLAV---HVDIAHITSQLEGTKISSD------SSPAGLPETTVNPFGGTVPPSAS----FALPKRPLTAYQQFCKNQRDQICQQHPGAKFAEINSLLGAAWKALSPEQRSEFEQSVAEDRHRYDQEMTQYKEQQQQLEKERMAIEFYEKELRVQKXXXXXXXXXXEQKDAVKNV-PAPPKQARSAYNFFVASRFKETGGNSVFGLSAQIAKEWKALQGSRNKKGKALVASFEKMAAEDEQRYRAETEEHAAALAEXXXXXXXXXXXXXXXXXEAYETNLKEKEDAQAFRKLQAELKMAQKQEKKKLRXXXXXXXXXXXAEPKRPKNAYAIFFSKNAAEVSEYIKETNVEHTMAKEVAARWKALSDAEKEPYLKEAENDRVRYRNEMEAFNATQ 439
A+P EET+ DI IT L+ T I++D + A LP NPFGG + SAS ALPKRPLTAYQQFCK RD ICQQ P A F+++NS LG W+ALS E++ +++Q V EDR RYD+EM EQ+ Q EKER+AI+FY +L+V+K + + N PA PKQ RSAYNFF+A+RFKE GN FG +AQIA+EWK LQ SR KK K L+A+F KM A+DEQRYR E E++ L + EAYE +L++KEDAQAFRK+Q +LK +++ +KK R XXXXXXXX AEPKRPKNAYAIFFSK A EVSEYI++ +VEH+MAKE+AARWKALSD EK+PY+ EAE DR RY+ EM AF++ Q
Sbjct: 33 AKPQEETVVETPPKPDIDQITEHLQQTTIANDHLETQPAPSAQLPNA--NPFGGAILSSASAAAPLALPKRPLTAYQQFCKQNRDAICQQIPKASFSQVNSKLGQQWRALSSEEQQQYQQQVMEDRQRYDREMHHINEQRTQAEKERLAIDFYHHQLKVEKALEMYEKHLEQHSPSSDNTAPAAPKQPRSAYNFFMAARFKEIDGNIGFGATAQIAEEWKQLQSSRKKKDKTLLANFNKMVADDEQRYRVEMEQYQTVLDQHTAKKAKESEQFKQRALEAYEASLRDKEDAQAFRKMQTQLKAVERELRKKAREDXXXXXXXXAAEPKRPKNAYAIFFSKLAPEVSEYIRQHDVEHSMAKEIAARWKALSDREKKPYVLEAEKDRERYQKEMNAFSSAQ 429
BLAST of Gvermi4233.t1 vs. uniprot
Match: A0A8C3ZBP1_9TELE (Transcription factor A, mitochondrial-like n=2 Tax=Denticeps clupeoides TaxID=299321 RepID=A0A8C3ZBP1_9TELE) HSP 1 Score: 80.9 bits (198), Expect = 1.930e-13 Identity = 58/189 (30.69%), Postives = 93/189 (49.21%), Query Frame = 0
Query: 110 PKRPLTAYQQFCKNQRDQICQQHPGAKFAEINSLLGAAWKALSPEQRSEFEQSVAEDRHRYDQEMTQYKEQQQQLEKERMAIEFYEKELRVQKXXXXXXXXXXEQKDAVKNVPAPPKQARSAYNFFVASRFKETGGNSVFGLSAQIAKEWKALQGSRNKKGKALVASFEKMAAEDEQRYRAET---EEH 295
PKRPLT Y +F K Q+ + QHP K EI + W+AL+PEQ+ F+Q+ ++R RY M +Y Q L + A EK L++ + +K PK+ R+A+N F+A F+E G ++ G + +WK L ++ + + ++A +D+ RY+ E EEH
Sbjct: 48 PKRPLTGYMRFVKQQQPVVSGQHPDVKVVEIVRKIAQQWRALTPEQKQPFQQASLQERERYKAAMEEYHAQ---LTPTQSAAIMSEKRLKMARRRAL-------RKKRELTSLGKPKRPRTAFNIFMAEHFEEAKGTTMQGKMKSLMDDWKKLLANQKQ-------VYVQLAEDDKIRYKNEMKAWEEH 219
BLAST of Gvermi4233.t1 vs. uniprot
Match: W5MHD6_LEPOC (Transcription factor A, mitochondrial n=2 Tax=Lepisosteus oculatus TaxID=7918 RepID=W5MHD6_LEPOC) HSP 1 Score: 77.0 bits (188), Expect = 4.680e-12 Identity = 57/189 (30.16%), Postives = 93/189 (49.21%), Query Frame = 0
Query: 110 PKRPLTAYQQFCKNQRDQICQQHPGAKFAEINSLLGAAWKALSPEQRSEFEQSVAEDRHRYDQEMTQYKEQQQQLEKERMAIEFYEKELRVQKXXXXXXXXXXEQKDAVKNVPAPPKQARSAYNFFVASRFKETGGNSVFGLSAQIAKEWKALQGSRNKKGKALVASFEKMAAEDEQRYRAET---EEH 295
PKRPLT Y ++ + QR +Q+P K +I + WKALS E++ F+++ DR +Y +EM ++K Q + + E EK R + +K + PK+ RSA+N F+A F+E G S+ G + +W+ L S+ + + ++A +D+ RYR E EEH
Sbjct: 48 PKRPLTGYIRYIRQQRPVFIKQYPDVKNVDITRKIAQEWKALSSEEKRPFQEAAVADREQYKEEMMKFKAQLTPAQTAALEEERREKIARRRTI----------RKKRELTMLGKPKRPRSAFNIFMAEHFEEAKGVSMQGKMKSLFDDWRNLHASQKQ-------VYMQLAEDDKIRYRNEIKSWEEH 219
BLAST of Gvermi4233.t1 vs. uniprot
Match: UPI001C0A3F47 (transcription factor A, mitochondrial n=1 Tax=Alosa sapidissima TaxID=34773 RepID=UPI001C0A3F47) HSP 1 Score: 74.7 bits (182), Expect = 2.530e-11 Identity = 57/189 (30.16%), Postives = 92/189 (48.68%), Query Frame = 0
Query: 110 PKRPLTAYQQFCKNQRDQICQQHPGAKFAEINSLLGAAWKALSPEQRSEFEQSVAEDRHRYDQEMTQYKEQQQQLEKERMAIEFYEKELRVQKXXXXXXXXXXEQKDAVKNVPAPPKQARSAYNFFVASRFKETGGNSVFGLSAQIAKEWKALQGSRNKKGKALVASFEKMAAEDEQRYRAET---EEH 295
PKRPLT Y +F K QR Q+ Q+P K E+ + W+ L+PEQ+ FEQ+ +R++Y M +Y Q QL + A EK + K +K N PK+ R+ +N F+A F+E G ++ + ++WK L ++ + + ++A +D+ RY+ E EEH
Sbjct: 47 PKRPLTGYMRFVKEQRLQVITQNPDVKAVEVIKQIAERWRVLTPEQKRPFEQAALSERNQYKTIMERY---QAQLTPAQSAAMVEEKRQKRAKRKAI-------RKKRELNTLGKPKRPRTGFNIFMAEHFEEARGVTMQAKMKSLLEDWKNLYITQKQ-------VYLQLAEDDKVRYKNEIKTWEEH 218
BLAST of Gvermi4233.t1 vs. uniprot
Match: A0A6J2V8H0_CHACN (transcription factor A, mitochondrial n=1 Tax=Chanos chanos TaxID=29144 RepID=A0A6J2V8H0_CHACN) HSP 1 Score: 73.6 bits (179), Expect = 6.080e-11 Identity = 54/189 (28.57%), Postives = 96/189 (50.79%), Query Frame = 0
Query: 110 PKRPLTAYQQFCKNQRDQICQQHPGAKFAEINSLLGAAWKALSPEQRSEFEQSVAEDRHRYDQEMTQYKEQQQQLEKERMAIEFYEKELRVQKXXXXXXXXXXEQKDAVKNVPAPPKQARSAYNFFVASRFKETGGNSVFGLSAQIAKEWKALQGSRNKKGKALVASFEKMAAEDEQRYRAET---EEH 295
PKRPLTAY ++ K Q+ I +Q+P K E+ + W+ ++P+Q+ FE++ DR +Y + M ++ Q QL + A EK ++ K +K N PK+ R+A+N F++ F+E G+++ + ++WK L S+ + + ++A +D+ RY+ E EEH
Sbjct: 47 PKRPLTAYIRYVKEQQPIISRQNPDIKIVEVMRKIAQQWRVMTPDQKRPFEEASLADREQYKRAMERF---QAQLSPAQSAALAEEKRQKMAKRRAI-------RKKRELNSLGKPKRPRNAFNIFMSEHFEEAKGSTMQAKMKSLMEDWKGLYVSQKQ-------IYIQLAEDDKVRYKNEMKSWEEH 218
BLAST of Gvermi4233.t1 vs. uniprot
Match: A0A7L4HUW5_SCOUM (TFAM factor (Fragment) n=1 Tax=Scopus umbretta TaxID=33581 RepID=A0A7L4HUW5_SCOUM) HSP 1 Score: 71.2 bits (173), Expect = 1.760e-10 Identity = 56/192 (29.17%), Postives = 88/192 (45.83%), Query Frame = 0
Query: 110 PKRPLTAYQQFCKNQRDQICQQHPGAKFAEINSLLGAAWKALSPEQRSEFEQSVAEDRHRYDQEMTQYKEQQQQLEKERMAIEFYEKELRVQKXXXXXXXXXXEQKDAVKNVPAPPKQARSAYNFFVASRFKETGGNSVFGLSAQIAKEWKALQGSRNKKGKALVASFEKMAAEDEQRYRAETEEHAAALAE 301
PKRPLTAY +F K R Q++P E+ + AWK L Q+ +E++ D RY++++ YK Q L + A E+ R+ K V PK+ RS +N FV+ F+E+ G S G Q+ W+ L GS+ + + ++A +D+ RY E + A + E
Sbjct: 9 PKRPLTAYFRFLKENRSAFRQKNPEMSNVELVKRIAGAWKELPASQKQVYEEARKADWQRYEEQLATYKAQ---LTPAQAAALKEERRKRLAKRRSFRAKREL-------TVLGKPKRPRSGFNIFVSENFQESEGLSPMGKMKQLFDTWRKLSGSQKQ-------PYLQLAEDDKVRYENEMKSWEAKMIE 183
BLAST of Gvermi4233.t1 vs. uniprot
Match: A0A6P3VJ43_CLUHA (transcription factor A, mitochondrial isoform X1 n=2 Tax=Clupea harengus TaxID=7950 RepID=A0A6P3VJ43_CLUHA) HSP 1 Score: 71.6 bits (174), Expect = 2.740e-10 Identity = 56/200 (28.00%), Postives = 101/200 (50.50%), Query Frame = 0
Query: 92 TTVNPFGGTVPPSASFALPKRPLTAYQQFCKNQRDQICQQHPGAKFAEINSLLGAAWKALSPEQRSEFEQSVAEDRHRYDQEMTQYKEQQQQLEKERMAIEFYEKELRVQKXXXXXXXXXXEQKDAVKNVPAPPKQARSAYNFFVASRFKETGGNSVFGLSAQIAKEWKALQGSRNKKGKALVASFEKMAAEDEQRYRAE 291
T PF +A+ PKRPLT Y +F K Q+ Q+ +Q+P AK E+ + W+ L+ Q+ FEQ+ DR++Y M ++ Q QL E+ A+ EK + K ++K + ++ PK+ R A+N F++ F+E G+++ + ++WK L ++ + + ++A +D+ RY+ E
Sbjct: 34 TAAKPFS-----TAAGGPPKRPLTGYMRFVKEQQPQVTRQYPDAKAVEVIRKVAERWRGLTLIQKQPFEQAALVDRNQYKVTMQRF---QAQLTPEQSAVLVEEKRQKRAKRKNI------KKKRELTSL-GKPKRPRIAFNIFMSEHFEEARGDTMPAKMKSLLEDWKNLYMTQKQ-------VYVQLAEDDKVRYKTE 211
BLAST of Gvermi4233.t1 vs. uniprot
Match: A0A0E9WXS0_ANGAN (Uncharacterized protein n=3 Tax=Anguilla anguilla TaxID=7936 RepID=A0A0E9WXS0_ANGAN) HSP 1 Score: 71.2 bits (173), Expect = 3.570e-10 Identity = 55/189 (29.10%), Postives = 89/189 (47.09%), Query Frame = 0
Query: 110 PKRPLTAYQQFCKNQRDQICQQHPGAKFAEINSLLGAAWKALSPEQRSEFEQSVAEDRHRYDQEMTQYKEQQQQLEKERMAIEFYEKELRVQKXXXXXXXXXXEQKDAVKNVPAPPKQARSAYNFFVASRFKETGGNSVFGLSAQIAKEWKALQGSRNKKGKALVASFEKMAAEDEQRYRAET---EEH 295
PKRPLT+Y +F K QR + +Q+P K +I + W+ALSPEQ+ FE++ D +Y ++ +YK Q + + KE R QK + + PK+ RSA+N F A + G ++ + +WK L S+ + + ++A +D+ RY+ E EEH
Sbjct: 45 PKRPLTSYMRFVKQQRPLVVRQNPDLKLVDIVKRIAQHWRALSPEQKRPFEEASLADHAQYKMDIERYKSQLTPAQSAAL------KEERRQKMAKRRSIRHKRELTLL----GKPKRPRSAFNIFTAEHIPQARGTTMPAKLISVTDDWKRLHLSQKQ-------VYIQLAEDDQIRYKNEMKSWEEH 216
BLAST of Gvermi4233.t1 vs. uniprot
Match: A0A0J8RKA3_COCIT (Non-histone chromosomal protein 6 n=1 Tax=Coccidioides immitis H538.4 TaxID=396776 RepID=A0A0J8RKA3_COCIT) HSP 1 Score: 66.2 bits (160), Expect = 4.180e-10 Identity = 30/68 (44.12%), Postives = 43/68 (63.24%), Query Frame = 0
Query: 110 PKRPLTAYQQFCKNQRDQICQQHPGAKFAEINSLLGAAWKALSPEQRSEFEQSVAEDRHRYDQEMTQY 177
PKR L+AY F K QR+ + +++PG F ++ LLG WKALS +QR+ +E+ A D RY+ E Y
Sbjct: 8 PKRGLSAYMFFAKEQRENVREENPGISFGQVGKLLGERWKALSDKQRAPYEEKAAADEKRYEDEKANY 75
BLAST of Gvermi4233.t1 vs. uniprot
Match: A0A5A9PTN6_9TELE (Transcription factor A, mitochondrial n=1 Tax=Triplophysa tibetana TaxID=1572043 RepID=A0A5A9PTN6_9TELE) HSP 1 Score: 70.1 bits (170), Expect = 8.820e-10 Identity = 55/189 (29.10%), Postives = 92/189 (48.68%), Query Frame = 0
Query: 110 PKRPLTAYQQFCKNQRDQICQQHPGAKFAEINSLLGAAWKALSPEQRSEFEQSVAEDRHRYDQEMTQYKEQQQQLEKERMAIEFYEKELRVQKXXXXXXXXXXEQKDAVKNVPAPPKQARSAYNFFVASRFKETGGNSVFGLSAQIAKEWKALQGSRNKKGKALVASFEKMAAEDEQRYRAET---EEH 295
PKRPLTAY +F K+ + +Q+PG K +I + W+ L+PEQ+ F++ R +Y + +YK Q + +A E R QK ++ +++ PK+ RS +N F+A F+E G ++ G + +WK L N K + + ++A +D+ RY+ E EEH
Sbjct: 47 PKRPLTAYMKFMKDNQPTFVRQNPGIKNVDIVRKIAQQWRGLTPEQKQPFQEVSLAAREQYKLALQEYKAQLTPAQSAAIAEE------RKQKLAKRKAIRKKKELNSL----GKPKRPRSGFNIFMAEHFEEARGATMQGKMKSLTDDWKRL----NIPQKQI---YTQLAEDDKVRYKNEIKSWEEH 218 The following BLAST results are available for this feature:
BLAST of Gvermi4233.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gvermi4233.t1 ID=Gvermi4233.t1|Name=Gvermi4233.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=441bpback to top |