Gvermi4212.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi4212.t1
Unique NameGvermi4212.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length201
Homology
BLAST of Gvermi4212.t1 vs. uniprot
Match: A0A2V3J1C3_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J1C3_9FLOR)

HSP 1 Score: 278 bits (711), Expect = 1.310e-91
Identity = 126/200 (63.00%), Postives = 156/200 (78.00%), Query Frame = 0
Query:    2 TTTVLSYLSGGTPFCRDIAVQGAGNPEIRLGSFRLGISRRALAVGECKELSWWQNGVLMGEYGVTPRINRFNLESELERRGTHTNVELRRGDLLAFRFADASYHCFTHLLNIMVDGDYISLGHSSMSVRFSRQFVPDWYEPSYSPTLAEDEDSAQPSDFLPLRTNLFSGGMILS-GWDYWRDPDGSRDHMKGNFYYRVQV 200
            T +V+  LSG   +CRD  +QGAG P I+LGS+ +GIS++AL   ECK++ WW NG L+GEYG TPRINRFN++ EL RRGTHT +EL+RGDLLAFRF DASYHCFTH+ +I V+G  + LG SS+S+RF+RQF  DW EPS++P LA DED A P+DFLPLRTN FS G  ++ GWDYW  P G+RDH KGNFYYRVQ+
Sbjct:   83 TRSVVDSLSGSQLYCRDETIQGAGLPSIKLGSWTIGISKKALLENECKDMKWWLNGELLGEYGETPRINRFNVDYELLRRGTHTAIELKRGDLLAFRFRDASYHCFTHVSDIEVNGQIVRLGDSSLSIRFARQFSQDWNEPSFTPNLASDEDLALPTDFLPLRTNFFSDGRTINAGWDYWTQPAGTRDHEKGNFYYRVQL 282          
BLAST of Gvermi4212.t1 vs. uniprot
Match: A0A2V3IDR1_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IDR1_9FLOR)

HSP 1 Score: 175 bits (443), Expect = 6.880e-51
Identity = 81/197 (41.12%), Postives = 118/197 (59.90%), Query Frame = 0
Query:   15 FCRDIAVQGAGNPEIRLGSFRLGISRRALAVGECKELSWWQNGVLMGEYG--VTPRINRFNLESELERRGTHTNVELRRGDLLAFRFADASYHCFTHLLNIMVDGDYISLGHSSMSVRFSRQFVPDWYEPSYSPTLAEDEDSAQ--------PSDFLPLRTNLF-SGGMILSGWDYWRDPDGSRDHMKGNFYYRVQV 200
            +CR++  + AG P +RLGS  +G+SR+ +    C EL W+ NG  M  YG    P IN  N++ E++RR  HT++EL+RGDL+AFRF  ASYHCFT +    +DG  +S     + +R++ +  P W+ PS++P   ++ DS             F+PLR   F +G  I+ G DYW  PDG RDH  GNFY+R+Q+
Sbjct:  100 YCRNMTSEMAGPPLLRLGSLEIGLSRKGMVSNACNELVWFYNGEFMVNYGDDSNPEINCANVDYEIDRRANHTSIELKRGDLIAFRFKHASYHCFTSIAKFYIDGKRLSSMDKEVVIRYTTKHTPGWHHPSFTPMYPKNNDSVYNVTEGTEAAGVFVPLRRRFFETGEKIMPGKDYWHPPDGGRDHKVGNFYFRIQL 296          
BLAST of Gvermi4212.t1 vs. uniprot
Match: R7Q5X4_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q5X4_CHOCR)

HSP 1 Score: 148 bits (373), Expect = 1.950e-40
Identity = 71/188 (37.77%), Postives = 108/188 (57.45%), Query Frame = 0
Query:   14 PFCRDIAVQGAGNPEIRLGSFRLGISRRALAVGECKELSWWQNGVLMGEYGVTPRINRFNLESELERRGTHTNVELRRGDLLAFRFADASYHCFTHLLNIMVDGDYISLGHSSMSVRFSRQFVPDWYEPSYSPTLAEDEDSAQPSDFLPLRTN-LFSGGMILSGWDYWRDPDGSRDHMKGNFYYRVQV 200
            P   +  +  A   ++ LGSF    SR+ L  G CK L+WW +G ++  YG   +++  N++  L  R  +T   LR G ++AFRF +ASYHCF     ++V+G  +   + ++ VRFSR    +W+ P  +   AEDE +A  +DF+P+R   LF G  I +G D W+ PDGS DH + NFY+R +V
Sbjct:  107 PCHEETRMSAASRGKLILGSFLPKYSRKGLLNGNCKHLAWWVDGKMIQSYG-NEQVSADNVDEILNARANNTLFPLRPGSVIAFRFKNASYHCFNSFATVLVNGTELDTNNPTVKVRFSRAHKSNWFAPDANIVYAEDESTAAVTDFVPMRRKMLFDGSDIANGKDNWKPPDGSEDHKRSNFYFRFEV 293          
BLAST of Gvermi4212.t1 vs. uniprot
Match: A0A2V3J2G8_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J2G8_9FLOR)

HSP 1 Score: 133 bits (334), Expect = 1.330e-34
Identity = 65/178 (36.52%), Postives = 100/178 (56.18%), Query Frame = 0
Query:   28 EIRLGSFRLGISRRALAVGECKELSWWQNGVLMGEYGVTPRINRFNLESELERRGTHTNVELRRGDLLAFRFADASYHCFTHLLNIMVDGDYISLGHSSMSVRFSRQFVPDWYEPSYSPT---LAEDEDSAQPSDFLPLRTNLFSGGM-ILSGWDYWRDPDG-SRDHMKGNFYYRVQV 200
            E+ LG  +   SR+     +C E++WW NG L+G        +  +++  L+ R  HT +ELR GDL+AFRF D+SY+C+ HL   +++G  ++      +  ++R+F  DW+ PSY+ T   + EDE       FLPLRT   S  + I+ G DYW   D  S D+   N+Y+R+QV
Sbjct:  109 ELTLGRLKFHFSRKGALADDCNEVAWWHNGELLGNRKPVSITSPSDVDKVLKDREEHTLLELRPGDLIAFRFRDSSYYCYKHLTEFVINGTSVNSEALGFTTHYAREFTKDWFSPSYALTDQNMGEDETEPDIRKFLPLRTTKLSNSVSIVPGSDYWEPRDSNSPDNKPSNWYFRIQV 286          
The following BLAST results are available for this feature:
BLAST of Gvermi4212.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3J1C3_9FLOR1.310e-9163.00Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IDR1_9FLOR6.880e-5141.12Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7Q5X4_CHOCR1.950e-4037.77Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3J2G8_9FLOR1.330e-3436.52Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_147contigScGOVlb_147:752854..753456 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi4212.t1Gvermi4212.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_147 752854..753456 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi4212.t1 ID=Gvermi4212.t1|Name=Gvermi4212.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=201bp
MTTTVLSYLSGGTPFCRDIAVQGAGNPEIRLGSFRLGISRRALAVGECKE
LSWWQNGVLMGEYGVTPRINRFNLESELERRGTHTNVELRRGDLLAFRFA
DASYHCFTHLLNIMVDGDYISLGHSSMSVRFSRQFVPDWYEPSYSPTLAE
DEDSAQPSDFLPLRTNLFSGGMILSGWDYWRDPDGSRDHMKGNFYYRVQV
*
back to top