Gvermi4206.t2 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi4206.t2
Unique NameGvermi4206.t2
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length232
Homology
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BLAST of Gvermi4206.t2 vs. uniprot
Match: A0A2V3J1D2_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J1D2_9FLOR)

HSP 1 Score: 272 bits (695), Expect = 1.240e-88
Identity = 161/192 (83.85%), Postives = 177/192 (92.19%), Query Frame = 0 
Query:    1 MMHKIKKAAVRDKTADNAEFADYKNRLERLGSYLQASSAALNESERAWKEVCNRQKVFAEAFANSYPDKDEVRDFGKQSAQASQALVKEFVLKTEGSTAAHWAVDAVVQEYLGEVGAISGEYKAVADAKTEVVLYTKKVDDLQNAKKADEAKIARNXXXXXXXXXXXXXXXXXXXXXXXXVYNKRQVALKAT 192
            MMHKIKKA VRD+TADNAEFADY+NRLERLG+YL+ASSAALNESE++WK+VCNRQK+FAEAFANSYPDKDEVRDFGKQSAQ SQALVKEFVLKTEGSTA HW VDAVVQ+YL E+ AI+ EYK +ADAKTEV +YT+KVDDLQNAKK DE+KI+  XXXXXXXXXXXXXXXXXXXXX   VYNKRQVALKAT
Sbjct:    1 MMHKIKKATVRDRTADNAEFADYRNRLERLGAYLRASSAALNESEKSWKDVCNRQKIFAEAFANSYPDKDEVRDFGKQSAQCSQALVKEFVLKTEGSTAPHWQVDAVVQDYLTEICAIASEYKPIADAKTEVAMYTRKVDDLQNAKKQDESKISXXXXXXXXXXXXXXXXXXXXXXXMKAVYNKRQVALKAT 192
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BLAST of Gvermi4206.t2 vs. uniprot
Match: R7QL81_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QL81_CHOCR)

HSP 1 Score: 62.8 bits (151), Expect = 7.220e-8
Identity = 37/138 (26.81%), Postives = 68/138 (49.28%), Query Frame = 0 
Query:   13 KTADNAEFADYKNRLERLGSYLQASSAALNESERAWKEVCNRQKVFAEAFANSYPDKDEVRDFGKQSAQASQALVKEFVLKTEGSTAAHWAVDAVVQEYLGEVGAISGEYKAVADAKTEVVLYTKKVDDLQNAKKADE 150
            K+  NAE+ DY+++LE   + +++    +  + + W  +   Q  FA A   +  +   VR   ++  + +   ++  +L+ +G+   H  V AV++ YL  V  +   Y  V  + TEV+ Y KKVD L   +K  E
Sbjct:   23 KSGINAEYTDYRSKLEATQTAIKSLIKKIQATPQVWSAIAKHQSSFASALHAAIANDGVVRSHARE-VEGTVRQLQRLILEDDGAATPHRRVTAVLEAYLKSVETVQEGYAQVEMSYTEVLRYEKKVDKLNKKQKKRE 159
The following BLAST results are available for this feature:
BLAST of Gvermi4206.t2 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J1D2_9FLOR1.240e-8883.85Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QL81_CHOCR7.220e-826.81Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 125..180
IPR027267AH/BAR domain superfamilyGENE3D1.20.1270.60Arfaptin homology (AH) domain/BAR domaincoord: 6..206
e-value: 6.1E-40
score: 138.9
IPR027267AH/BAR domain superfamilySUPERFAMILY103657BAR/IMD domain-likecoord: 10..197

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_147contigScGOVlb_147:684092..700650 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi4206.t2Gvermi4206.t2Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_147 684092..700650 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi4206.t2 ID=Gvermi4206.t2|Name=Gvermi4206.t2|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=232bp
MMHKIKKAAVRDKTADNAEFADYKNRLERLGSYLQASSAALNESERAWKE
VCNRQKVFAEAFANSYPDKDEVRDFGKQSAQASQALVKEFVLKTEGSTAA
HWAVDAVVQEYLGEVGAISGEYKAVADAKTEVVLYTKKVDDLQNAKKADE
AKIARNIEKLEEAKKAYEDILERVVDKMKEVYNKRQVALKATIENFHLSS
KTRDEVYPKAFEALLSWGAMIWEGDIHALPK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027267AH/BAR_dom_sf