Gvermi3703.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi3703.t1
Unique NameGvermi3703.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length1227
Homology
BLAST of Gvermi3703.t1 vs. uniprot
Match: A0A2V3IWV5_9FLOR (CCR4-NOT transcription complex subunit 4 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IWV5_9FLOR)

HSP 1 Score: 1063 bits (2748), Expect = 0.000e+0
Identity = 708/1235 (57.33%), Postives = 819/1235 (66.32%), Query Frame = 0
Query:    1 MAEEEDDMPQCPLCLEELDSTDRAVEACQCGYQICLWCLHHIREQLNSRCPACRTPYQEQNFKYAEVNPEEAAKEAKERATAKKXXXXXXXXXXXXXXXXXXXAVSLQKAKSNLKHARIIQKNLVYVIGLSLTLAREEAIRRADMFGKYGRMLRILVNRSHPFNADAPGGPSISAYVQYVRDSDASAAVRAMNNAVLDGREIRCAIATTKYCDAFVRNAAASSDPSAAHFCGNQNCMYYHSLCTEETLTREEVLARQLGPPPPAHLFLPAPANGRTTNGTQPIHPRLAAHSVASGLVPPNRPAPRPFAVTSTSTVPPASSAPPSVHXXXXXXXALPLPCTNANPTVVQNTNTPAG-LPPESSSPRRSTVSE----IQQPSYPNGTPPDSPKGSRRPPTRLQRSPTSRDSSTSKFPRPSPTSTSTKPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--KLRLQPRRSREPSPPPGFENPASSSGSAXXXXXXXXXXXXSVSNDTKGNVNILRDRKVEVAKGKQVKKSSASPPPGFGRGMGSQRVDGKQTVVNDVAAAWAQEAVADEVFSAREQRLRSDFVGQVERESAPIPHDNPDSRSELAQVLAKIGGDLGVSSEFKSMQASRPPPVPPAAPARSRHASTPTVSDRNANVAPMGSPARLGSLFGNPTANVGYAVPSTPFPSTTAIANPTAPSSTPAYRGAFDNAIAQKLAASRVSQLPMASPRRNTSRFGFAQRESTGDVPVSMAPRSATSQPRSVSFQTSSSQAAYPAMSSSSEVFVRSHGANDVRQEQLLMNDLLHAAKTSKPVFLGTSRQNKSRFDFADHGTQPRSANYPPRSVRMNNNAPPKNISTRGRGHVNQSDSIASLAQLSTQEKLASIFNSAQMSGEALPPMPTFDAQIDPLANPNVPATPSKPVVHDDSHRSFRSVTRAAQVVRKDKSRVPDMSHPRQSSMPPPGFREATPGISPESTTVEKASTNSGVARIVASGGYVSSSK-KENTSHGTSREDSKSTGADGLQDDRRKTKPQRKREKKGKHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQIPRNRRTAEMGMVRSSSPPTPSAPPKLPRAERVPERAQGVSVVKDSQKLSNE-QVKKPSDDSAVVLIPSKLSEDAGKYMSVSELEREVEAAKAREAQLQDKLLELQRRIRSYDNVRT 1226
            MAEEE+++PQCPLCLEELD+TDRAVEACQCGYQICLWCLHHIREQLNSRCPACRTPYQEQNFKYA+VNPEEAAKEAKERATAKKXXXXXXXXXXXXXXXXX  AVSLQKAKSNLKHARI+QKNLVY+IGLSLTLAREE IRRADMFGK+GRMLRILVNRSHPFNADAPGGPSISAYVQYVRDSDASAAVRAMNNAV DGREIRCAIATTKYCD+FVRNAA +SDP+AAH+CGNQNCMYYHSL TEETLTREEVLARQ GPPPPAHLFLPAP+NGR  N  Q IHPRLAAHSVASGLVP  RP  RP  V S S +P  SSA PS+H       ++P+P TN +  V +N N   G L  +S+SPR+   SE    ++  S                              +SK+PR + TST     XXXXXXXXXXXXXXXXXXXXX                   KLR  PRRSREPSPPPGFEN  + S               S S+D + + +  R + +    G     S+  PPPGFG    SQ  +  Q + NDVAAAWAQEA +D+VFS  ++R R+DF+G V R +A IP DNPDSRSELAQVLAKIGGDLGVSSEFKS+ +S       A   R+   S    +  +  +    +PA LGSLFGN     G  VPSTP  +T A   P  P+ +P               A+R S+L ++SPRRNTSRFGFAQRE    +P S  PRSA  Q RS  FQ        P  SS+SE+FVR   AN++ ++ +LMN+LL +AK + P+  G SRQN+SRFDFADH + P +ANY  R+V   +N PPKN     R +  ++DSIASLAQLSTQEKLASIFNSAQMSGEALPPMP+FDA +DPLANPN+   PSKPV  D S+R FR+V+R+A V  +DK RV      RQ +MPPPGFREATPGISPESTTV+  ST SGVA+ VASGG  S  K KE      S ++S S+G D   DDRR+ K Q+KREKK +                                 XXXXXXXXX                               +  R  +  E     +S P   S        E V E++  V+V ++SQK ++E Q+ + +DDSAVVLIPSK+SED GKYMSVSELEREVEAA+AREAQLQDKLLELQRRIRSYDNVRT
Sbjct:    1 MAEEEEEVPQCPLCLEELDATDRAVEACQCGYQICLWCLHHIREQLNSRCPACRTPYQEQNFKYAQVNPEEAAKEAKERATAKKXXXXXXXXXXXXXXXXXAAAVSLQKAKSNLKHARILQKNLVYIIGLSLTLAREEVIRRADMFGKFGRMLRILVNRSHPFNADAPGGPSISAYVQYVRDSDASAAVRAMNNAVFDGREIRCAIATTKYCDSFVRNAATTSDPTAAHYCGNQNCMYYHSLSTEETLTREEVLARQFGPPPPAHLFLPAPSNGRPINAQQSIHPRLAAHSVASGLVPAMRPPARPPIVNS-SAIPSTSSAAPSIHPPSSLS-SVPIPSTNTSMAVAKNPNNSTGNLSSDSASPRQHMTSETGTNLRPGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVSSKYPRSTGTSTXXXXXXXXXXXXXXXXXXXXXXXXXXRSSPRHGQTTFDDAPTSRPKLRFHPRRSREPSPPPGFENRVAMSPPVPSKPPGFDIPVSSPSSDIRASASNARPKDLTTGTGNPPSTSALPPPPGFGPVPVSQNTETGQALANDVAAAWAQEAASDKVFSNEDKRSRTDFIGSVGRGNARIPQDNPDSRSELAQVLAKIGGDLGVSSEFKSLHSSSFFTSEQAN--RNPFLSGSVGNGGSGKMMHPATPAHLGSLFGNHATGRGCPVPSTPTTTTNA---PVNPNGSPQXXXXXXXXXXTYRLANRKSELKLSSPRRNTSRFGFAQREIANAIPGSRVPRSAL-QARSTPFQVG------PQTSSASEMFVRPPAANELHKQPMLMNELLQSAKPTNPLVHGPSRQNRSRFDFADHRSPPLTANYRTRAVPTTSNPPPKNSPPVPRSYATRNDSIASLAQLSTQEKLASIFNSAQMSGEALPPMPSFDAHVDPLANPNISVIPSKPVAPDQSNRPFRTVSRSANVASEDKPRVTSTLQSRQPTMPPPGFREATPGISPESTTVDSPSTTSGVAKSVASGGETSRRKSKEIAPQVASVDESVSSGTDSHDDDRRRAKAQKKREKKSRQLRDSTERTYVERKQKNGKGQTSAPAVQPVQVTXXXXXXXXXHTSQTGKTVLSAQQPHSTQTVQAKVTKPPNVERQRVSQAVEPVRPSTSKPANKSKRDN----ELVSEKSGNVAVAENSQKTASEKQIHRSADDSAVVLIPSKMSEDPGKYMSVSELEREVEAARAREAQLQDKLLELQRRIRSYDNVRT 1217          
BLAST of Gvermi3703.t1 vs. uniprot
Match: R7Q8C7_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q8C7_CHOCR)

HSP 1 Score: 568 bits (1465), Expect = 1.830e-179
Identity = 512/1303 (39.29%), Postives = 651/1303 (49.96%), Query Frame = 0
Query:    1 MAEEEDDMPQCPLCLEELDSTDRAVEACQCGYQICLWCLHHIREQLNSRCPACRTPYQEQNFKYAEVNPEEAAKEAKERATAKKXXXXXXXXXXXXXXXXXXXAVSLQKAKSNLKHARIIQKNLVYVIGLSLTLAREEAIRRADMFGKYGRMLRILVNRSHPFNADAPGGPSISAYVQYVRDSDASAAVRAMNNAVLDGREIRCAIATTKYCDAFVRNAAASSDPSAAHFCGNQNCMYYHSLCTEE-TLTREEVLARQLGPPPPAHLFLPAPANGRTTNGTQPIHPRLAAHSVASGLVPPNRPAPR---PFAVTSTS------TVPPASSAPPSVHXXXXXXXALPLPCTNANPTVVQNT------------------------------------NTPAGL----PPESSSPRRSTVSEIQQPSYPNG---------------TPPDSPKGSRRPPTRLQRSPTSRDSSTSKFPRPSPTSTSTKPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLRLQPRRSREPSPPPGFENPASSSGSAXXXXXXXXXXXXSVSNDTKGNVNILRDRKVEVAKGKQVKKSSASPPPGFGRGMGSQRVDG-KQTVVNDVAAAWAQEAVADEVFSAREQRLRSDFVGQVERESAPIPHDNPDSRSELAQVLAKIGGDLGVSSEFKSMQASRPPPVPPAAPARSRHASTPTVSDRNANVAPMGSPARLGSLFGNPTANVGYAVPSTPFPSTTAIANPTAPSSTPAYRGAFDNAIAQKLAASRVSQLPMASPRRNTSRFGFAQRESTGDVPVSMAPR----SATSQPRSVSFQTSSSQAAYPAMSSSSEVFVRSHGANDVRQEQLLMNDLLHAAKTSKPVFLGTSRQNKSRFDFADHGTQPRSANYPPRSVRMNNNAPPKNISTRGRGHVNQSDSIASLAQLSTQEKLASIFNSAQMSGEALPPMPTFDAQIDPLANPNVPATPSKPVVHDDSHRSFRSVTRAAQV-----VRKDKSRVPDMSHPRQSSMPPPGFREATPGISPESTTVEKASTNSGVARIVASGGYVSSSKKENTSHGTSREDSKSTGADGLQDDRRKTKPQRKREKKGKHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQIPRNRRTAEMGMVRSSSPPTPS--APPKLPRAERVPERAQGVSVVKDSQKLSNEQVKKPSDDSAVVLIPSKLSEDAGKYMSVSELEREVEAAKAREAQLQDKLLELQRRIRSYDNVRT 1226
            M EEE+++P CPLCLEELDSTDRAV+ACQCGYQ+CLWCLHHIREQL++RCPACRTPY+EQNFK+AEVNPE+AAKEAKERATAKK XXXXXXXXXXXXXXXX  AVS  KAKSN KHARI+Q+NLVYVIGLSLTLAREE IRRADMFGK+GRM+RILVNRSHPFNADAPGGPSISAY+QY RDSDASAAVR MNN V DGREIRCAIATTKYCD F RNAAAS D +A   CGNQ CMYYHS+   +  LTREEVLARQLGPPPPAHLF P        +  +P H  L  H        P  P P    P + +S S      T PPAS   PS         ++P P  +  P                                          N  AG     PP+  SP R                             + P S  G+        R   +R ++ S  P  SP S+  + P                                           PRR    + PPGFE+ ASSS SA    XXXXXXXX   + + GN      R+  V K      +  S PPGFG    S R +G ++T  N+VAAAW+QEA  DEVF+ +++R R   VG+  + +   P    DS   LAQ+LAK G + GVS+E +S             P     AS       N   AP+ S   LGSLFG   ++ G  VP  P      + +P + S T A+          KL  S       A+ RRN+SRF FA+R     +  S  P     S  S  R  S  T           SS + +  +    +  Q    +    HA K           Q +SRF FA+  + P+S +  PR         P+ + +   G    S      A LST EKLAS+F+ A+ SGE LPPMPT + Q+D LA+ +    P+        +R   ++   A V     +RK+      +S  R +   PPGFREATP ISPE+T V+  +T +GVA  VASGG   ++ +  +   T  +D+ S+G + +++DR++++ QRKR+KK +                                                                         Q+        + ++  S+ P  S  A  KL   +R+   A  VS +++ +  S  Q+   + + +  L  ++L++D  ++MSVSELEREVEAA+AREAQLQD+L ELQRRIR+YDNVRT
Sbjct:    1 MDEEEEEIPTCPLCLEELDSTDRAVKACQCGYQVCLWCLHHIREQLSARCPACRTPYEEQNFKFAEVNPEQAAKEAKERATAKKEXXXXXXXXXXXXXXXXAVAVSQLKAKSNFKHARILQRNLVYVIGLSLTLAREEVIRRADMFGKFGRMMRILVNRSHPFNADAPGGPSISAYIQYYRDSDASAAVRGMNNGVFDGREIRCAIATTKYCDVFARNAAAS-DQNAMFHCGNQFCMYYHSIAPADLVLTREEVLARQLGPPPPAHLFFP--------DSRRPNHAPLPFHRPGPPQPIPIHPPPNTGVPLSTSSASQGRSMMTRPPASMPSPST------APSIPFP-QHGQPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNVTAGRKVGGPPQPFSPTRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVPLSSAGASS-----ARGNGTRSATASAAPFFSPRSSRAQLPSNAGWASGHSRNSSRSPPRRGPSTSLDESALSTPRT-------PRRLPRDNAPPGFESAASSSTSAAPSRXXXXXXXXXPQSSS-GN------REGAVTKSGLTSGAHISAPPGFGPTAVSSRGNGSEETDRNNVAAAWSQEATTDEVFATQDRRPRRP-VGKPGQRAGLGPQSATDSVPALAQLLAKRGKETGVSAELQSKTG----------PLEISDASESRNGQYNLADAPLVSQPPLGSLFGK--SSQGGKVP--PSDVDRRVKSPESSSYTSAFSVPLGRTETSKLQESA------AAARRNSSRFDFARRSVPESLSESTHPSTQSMSIPSLERGASKTTFGKVGGSAVPKSSRDEYAFAEMNPNFVQGSSAVTSTSHALK-----------QARSRFGFAEQTSSPKSNHTRPR---------PEGLDSTANGEGLSSGFDGPFANLSTAEKLASLFHRAEWSGERLPPMPTHEPQVDQLASADQVLDPNT-----SHNRPVTALPIPAAVPDHGEIRKNSP----VSRSRPTQYAPPGFREATPDISPETTAVDNKTTTAGVATKVASGGSTRNASEALSPVRT--DDTVSSGTESIEEDRKRSRAQRKRDKKAR-------------------------------------------------------------------------QLREAAERKALEVLPPSTVPVQSTDASTKLKDQQRL---AASVSGLREMKNTSPGQIISQATEPSKHLKQARLTDDPSRFMSVSELEREVEAARAREAQLQDRLQELQRRIRNYDNVRT 1140          
BLAST of Gvermi3703.t1 vs. uniprot
Match: A0A1X6P7L2_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P7L2_PORUM)

HSP 1 Score: 335 bits (860), Expect = 2.450e-93
Identity = 189/325 (58.15%), Postives = 229/325 (70.46%), Query Frame = 0
Query:    5 EDDMPQCPLCLEELDSTDRAVEACQCGYQICLWCLHHIREQLNSRCPACRTPYQEQNFKYAEVNPEEAAKEAKERATAKKXXXXXXXXXXXXXXXXXXXAVSLQKAKSNLKHARIIQKNLVYVIGLSLTLAREEAIRRADMFGKYGRMLRILVNRSHPFNADAPGGPSISAYVQYVRDSDASAAVRAMNNAVLDGREIRCAIATTKYCDAFVRNAAASSDPSAAHFCGNQNCMYYHSLCT--EETLTREEVLARQLGPPPPAHLF-----LPAPANGRTTNGTQPIHPRLAAHSVASGLVPPNRPAPRPFAVTSTSTVPPASSAP 322
            ED++PQCPLCLE+LD+TD +V ACQCGY +CL CLHHIREQLN +CPACRTPY E+NF   +V+PE AA+E +ERA AKK        XXXXXXXXXXX     KAK+ LKH R++Q+NLVYVIGLSL+LAREEA++RA MFG++GR+ R+LVNR HP+NADAPGGPSI+AY+ + RD+DAS A R MN  V DGRE+RCAIATTKYCDAF+ +       S  H CGN++C Y H L    E+ LTREEVLARQLGPPPPAHLF     LP PA   +   T  +  R A        +P   P         T++ PPA+S P
Sbjct:   18 EDEVPQCPLCLEDLDATDLSVRACQCGYPVCLLCLHHIREQLNGKCPACRTPYSEKNFVIDKVDPEAAAREVRERAEAKKAREKRDRAXXXXXXXXXXXXXXXAKAKTTLKHVRVVQRNLVYVIGLSLSLAREEALKRAQMFGRFGRISRVLVNRGHPYNADAPGGPSIAAYILFARDTDASTAARVMNGEVFDGRELRCAIATTKYCDAFIPHG------SGKHLCGNEDCPYLHELAPYPEDVLTREEVLARQLGPPPPAHLFTCAPTLPTPAASSSLRLTTALASRRAXXXXXXXXLPSASP-------PLTASRPPAASPP 329          
BLAST of Gvermi3703.t1 vs. uniprot
Match: A0A7S1TG26_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TG26_9RHOD)

HSP 1 Score: 313 bits (802), Expect = 1.770e-91
Identity = 186/316 (58.86%), Postives = 225/316 (71.20%), Query Frame = 0
Query:    1 MAEEEDDMPQCPLCLEELDSTDRAVEACQCGYQICLWCLHHIREQLNSRCPACRTPYQEQNFKYAEVNPEEAAKEAKERATAKKXXXXXXXXXXXXXXXXXXXAVSLQKAKSNLKHARIIQKNLVYVIGLSLTLAREEAIRRADMFGKYGRMLRILVNRSHPFNADAPGGPSISAYVQYVRDSDASAAVRAMNNAVLDGREIRCAIATTKYCDAFVRNAAASSDPSAAHFCGNQNCMYYHSLC-TEETLTREEVLARQLGPPPPAHLFLPAPANGRTTNGTQPIHPRLAAHSVASGLVPPNRPAPRPFAVTSTSTV 315
            +  +ED+ P CPLCLEELD+TD ++ ACQCGYQ+CLWCLHHIREQLN RCPACRTPY+E+ F Y EV+PEEAA+ A++RA    XXXXXXXXXXXXXXXXXXX      AK NLK ARI+QKNLVY IGLSLTLAREE +RR ++FG++G++  + VNR+HP+N+DAPGGPSISAY+Q+ R++DA+ A R MN  VLDGREIR AIATTKYCDA+       S    AH CGN  C+Y H     ++ LTREEVL+R LGPPPP HLF                HPR  +  V     PP  P+  P  V S+S+V
Sbjct:    3 LGSDEDEAPSCPLCLEELDATDLSMRACQCGYQVCLWCLHHIREQLNGRCPACRTPYEEEKFVYDEVDPEEAARVARQRAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKLNLKMARIVQKNLVYAIGLSLTLAREEVLRRPELFGRFGKINLVFVNRNHPYNSDAPGGPSISAYIQFSREADAAMAARHMNGEVLDGREIRTAIATTKYCDAY------GSSGCPAH-CGNPRCLYLHDAAHPDDVLTREEVLSRGLGPPPPPHLFQD--------------HPRDGSDGVRKAGSPPTEPSAGPTTVHSSSSV 297          
BLAST of Gvermi3703.t1 vs. uniprot
Match: A0A7S3A0I5_9RHOD (Hypothetical protein (Fragment) n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A0I5_9RHOD)

HSP 1 Score: 292 bits (748), Expect = 2.670e-83
Identity = 167/264 (63.26%), Postives = 210/264 (79.55%), Query Frame = 0
Query:    5 EDDMPQCPLCLEELDSTDRAVEACQCGYQICLWCLHHIREQLNSRCPACRTPYQEQNFKYAEVNPEEAAKEAKERATAKKXXXXXXXXXXXXXXXXXXXAVSLQKAKSNLKHARIIQKNLVYVIGLSLTLAREEAIRRADMFGKYGRMLRILVNRSHPFNADAPGGPSISAYVQYVRDSDASAAVRAMNNAVLDGREIRCAIATTKYCDAFVRNAAASSDPSAAHFCGNQNCMYYHSLCT-EETLTREEVLARQLGPPPPAHLF 267
            ++D+P CPLC+EELD+TD AV AC+CGYQICL+CLH IR + NSRCPACRTPY+E+ F+ +EV+ EEAAK A+ERA    XXXXXXXXXXXXXXXXXXX  + QKA+ NLKHARI+Q+N+VYV GLSL LAREE +RR ++FG++GR+L +LVNR+  +N DAPGGPS++AYVQ+ RD+DAS AVR++N  + DGRE++ AIATTKYCDAFVR            FCGN +C++ H     E+ LTREEVL+ QLGPPPP +LF
Sbjct:   11 DEDVPSCPLCMEELDATDLAVRACRCGYQICLYCLHTIRAEHNSRCPACRTPYEEEKFEISEVDREEAAKLARERAEXXXXXXXXXXXXXXXXXXXXXXXXTEQKARMNLKHARIVQRNMVYVSGLSLNLAREETLRRNEIFGRFGRILFVLVNRTTAYNPDAPGGPSLTAYVQFARDADASQAVRSLNGDMFDGRELQLAIATTKYCDAFVRTGVPM-------FCGNMSCLHRHEPAPPEDVLTREEVLSNQLGPPPPQNLF 267          
BLAST of Gvermi3703.t1 vs. uniprot
Match: A0A7S3A1I5_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A1I5_9RHOD)

HSP 1 Score: 292 bits (748), Expect = 6.530e-80
Identity = 167/264 (63.26%), Postives = 210/264 (79.55%), Query Frame = 0
Query:    5 EDDMPQCPLCLEELDSTDRAVEACQCGYQICLWCLHHIREQLNSRCPACRTPYQEQNFKYAEVNPEEAAKEAKERATAKKXXXXXXXXXXXXXXXXXXXAVSLQKAKSNLKHARIIQKNLVYVIGLSLTLAREEAIRRADMFGKYGRMLRILVNRSHPFNADAPGGPSISAYVQYVRDSDASAAVRAMNNAVLDGREIRCAIATTKYCDAFVRNAAASSDPSAAHFCGNQNCMYYHSLCT-EETLTREEVLARQLGPPPPAHLF 267
            ++D+P CPLC+EELD+TD AV AC+CGYQICL+CLH IR + NSRCPACRTPY+E+ F+ +EV+ EEAAK A+ERA    XXXXXXXXXXXXXXXXXXX  + QKA+ NLKHARI+Q+N+VYV GLSL LAREE +RR ++FG++GR+L +LVNR+  +N DAPGGPS++AYVQ+ RD+DAS AVR++N  + DGRE++ AIATTKYCDAFVR            FCGN +C++ H     E+ LTREEVL+ QLGPPPP +LF
Sbjct:   11 DEDVPSCPLCMEELDATDLAVRACRCGYQICLYCLHTIRAEHNSRCPACRTPYEEEKFEISEVDREEAAKLARERAEXXXXXXXXXXXXXXXXXXXXXXXXTEQKARMNLKHARIVQRNMVYVSGLSLNLAREETLRRNEIFGRFGRILFVLVNRTTAYNPDAPGGPSLTAYVQFARDADASQAVRSLNGDMFDGRELQLAIATTKYCDAFVRTGVPM-------FCGNMSCLHRHEPAPPEDVLTREEVLSNQLGPPPPQNLF 267          
BLAST of Gvermi3703.t1 vs. uniprot
Match: A0A5J4YM21_PORPP (CCR4-NOT transcription complex subunit 4 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YM21_PORPP)

HSP 1 Score: 264 bits (675), Expect = 1.750e-70
Identity = 156/271 (57.56%), Postives = 203/271 (74.91%), Query Frame = 0
Query:    3 EEEDDMPQCPLCLEELDSTDRAVEACQCGYQICLWCLHHIREQLNSRCPACRTPYQEQNFKYAEVNPEEAAKEAKERATAKKXXXXXXXXXXXXXXXXXXXAVSLQKAKSNLKHARIIQKNLVYVIGLSLTLAREEAIRRADMFGKYGRMLRILVN-RSHPFNA--DAPGGPSISAYVQYVRDSDASAAVRAMNNAVLDGREIRCAIATTKYCDAFVR-NAAASSDPSAAHFCGNQNCMYYHSLCTEETL--TREEVLARQLGPPPPAHLF 267
            E+ED +P+CPLCLEELD+TD +++ C CGYQ+CLWCLHHIREQLN +CPACRTPY E+ F  AE++PE+A + A+ERA    XXXXXXXXXXXXXXXXXXX       K  LK ARI+ K+LVYV GLS TLAREE +RR ++FG++G +  +L+N RS    A  + PGGPS+SAY+++V+D+DA+ AVRA+N  ++DGRE+RCAIATTKYCD+F+  N A + D      C  +NC+Y H+L   E +  + E++L  QLGPPPP HLF
Sbjct:    6 EDEDGVPECPLCLEELDTTDLSLKPCHCGYQVCLWCLHHIREQLNGKCPACRTPYAEEKFVKAEIDPEDAKRAARERAEXXXXXXXXXXXXXXXXXXXXXXXXXXALPKLILKQARILCKSLVYVNGLSPTLAREEVLRRHELFGRFGTIELVLLNHRSSALRASNNGPGGPSMSAYIKFVKDTDAAHAVRAVNGEIMDGRELRCAIATTKYCDSFIETNCAENGDSGLLVPCELENCLYLHALAEPEIVISSAEDMLVTQLGPPPPGHLF 276          
BLAST of Gvermi3703.t1 vs. uniprot
Match: A0A7S0G5F8_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G5F8_9RHOD)

HSP 1 Score: 201 bits (510), Expect = 2.400e-52
Identity = 105/185 (56.76%), Postives = 134/185 (72.43%), Query Frame = 0
Query:  108 QKAKSNLKHARIIQKNLVYVIGLSLTLAREEAIRRADMFGKYGRMLRILVNRSHPFNADAPGGPSISAYVQYVRDSDASAAVRAMNNAVLDGREIRCAIATTKYCDAFVRNAAASSDPSAAHFCGNQNCMYYHSLCT-EETLTREEVLARQLGPPPPAHLFLPAP-------ANGRTTNGTQPIH 284
            QKA+ NLKHARI+Q+N+VYVIGLSL LAREE +RR ++FG++GR+L +LVNR+  +N DAPGGPS+SAYVQ+ RDSDAS AVR++N  +LDGRE++ AIATTKYCDAF+R            FCGN  C++ H     E+ LTREEVL+ QLGPPPP +LF  +         NG  T G++P H
Sbjct:    4 QKARMNLKHARIVQRNMVYVIGLSLNLAREETLRRNEIFGRFGRILFVLVNRATAYNPDAPGGPSLSAYVQFARDSDASQAVRSLNGDILDGRELQLAIATTKYCDAFIRAGVPM-------FCGNLGCLHRHEPAPPEDVLTREEVLSNQLGPPPPQNLFPSSEYVFRGPRINGVPTTGSRPAH 181          
BLAST of Gvermi3703.t1 vs. uniprot
Match: A0A0L0D3F5_THETB (Uncharacterized protein n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0D3F5_THETB)

HSP 1 Score: 193 bits (491), Expect = 1.210e-46
Identity = 95/250 (38.00%), Postives = 155/250 (62.00%), Query Frame = 0
Query:    5 EDDMPQCPLCLEELDSTDRAVEACQCGYQICLWCLHHIREQLNSRCPACRTPYQEQNFKYAEVNPEEAAKEAKERATAKKXXXXXXXXXXXXXXXXXXXAVSLQKAKSNLKHARIIQKNLVYVIGLSLTLAREEAIRRADMFGKYGRMLRILVNRSHPFNADAPGGPSISAYVQYVRDSDASAAVRAMNNAVLDGREIRCAIATTKYCDAFVRNAAASSDPSAAHFCGNQNCMYYHSLCTE-ETLTREEV 253
            +DD P+CPLC+E+LD TDR    C CGYQIC +C +HI++ ++ +CPACR  Y E+N+K+   +P E  K +K++ + +                          ++ +L++ R+IQ+NLVY IGLSL++AREE ++R D FG++GR+ +++VNR + +NA+A  GP++SAY+ Y +  +A  A+ A + +++DGR IR +  TTKYC  F+R+            C N +CMY H L  E ++ ++E++
Sbjct:    3 DDDEPECPLCMEQLDVTDRNFRPCPCGYQICRFCFNHIKDNMSGQCPACRQVYDEKNYKFTPPDPSEIKKASKKKGSKRVRKSDSGG------------------SRKHLQNVRVIQRNLVYAIGLSLSVAREETLKRHDFFGQFGRIHKVVVNRHNLYNANAAQGPTVSAYITYTQPDEAMRAIAATDGSLVDGRPIRASFGTTKYCSYFLRSVQ----------CNNPDCMYLHELGDERDSFSKEDL 224          
BLAST of Gvermi3703.t1 vs. uniprot
Match: A0A6B2KYD3_9EUKA (Uncharacterized protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2KYD3_9EUKA)

HSP 1 Score: 190 bits (483), Expect = 3.210e-46
Identity = 101/252 (40.08%), Postives = 153/252 (60.71%), Query Frame = 0
Query:    8 MPQCPLCLEELDSTDRAVEACQCGYQICLWCLHHIREQLNSRCPACRTPYQEQNFKYAEVNPEEA-----AKEAKERATAKKXXXXXXXXXXXXXXXXXXXAVSLQKAKSNLKHARIIQKNLVYVIGLSLTLAREEAIRRADMFGKYGRMLRILVNRSHPFNADAPGGPSISAYVQYVRDSDASAAVRAMNNAVLDGREIRCAIATTKYCDAFVRNAAASSDPSAAHFCGNQNCMYYHSLCTE-ETLTREEV 253
            M +CP+CL+ELD TDR+ + C+CGYQ+C +C +HI E LN +CPACR PY+ +N+K+   NPEE      AK+A+ER                              A+ NL + R+IQ+NLVY+  L+LT A EE ++R + FGK+G++ +I+VNRS+ +    P G S+SAY+ Y ++ DA AA++A++ ++LDGR +R +  TTKYC  F+RN            C N +CMY H L  + ++ T+E++
Sbjct:    1 MVECPICLDELDLTDRSFKPCKCGYQMCRFCWNHINENLNGKCPACRQPYKTENYKFNPPNPEEIQRIQNAKKARERERKHAEA----------------------NARKNLANVRVIQRNLVYLTNLALTAATEEILKRPEYFGKFGKIKKIVVNRSNVYQG--PQGSSVSAYITYFKNKDAHAAIKAVDGSLLDGRLLRASFGTTKYCSYFLRNVR----------CPNPDCMYLHELGNDVDSFTKEDM 218          
The following BLAST results are available for this feature:
BLAST of Gvermi3703.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IWV5_9FLOR0.000e+057.33CCR4-NOT transcription complex subunit 4 n=1 Tax=G... [more]
R7Q8C7_CHOCR1.830e-17939.29Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A1X6P7L2_PORUM2.450e-9358.15Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A7S1TG26_9RHOD1.770e-9158.86Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A7S3A0I5_9RHOD2.670e-8363.26Hypothetical protein (Fragment) n=2 Tax=Rhodosorus... [more]
A0A7S3A1I5_9RHOD6.530e-8063.26Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
A0A5J4YM21_PORPP1.750e-7057.56CCR4-NOT transcription complex subunit 4 n=1 Tax=P... [more]
A0A7S0G5F8_9RHOD2.400e-5256.76Hypothetical protein (Fragment) n=1 Tax=Rhodosorus... [more]
A0A0L0D3F5_THETB1.210e-4638.00Uncharacterized protein n=1 Tax=Thecamonas trahens... [more]
A0A6B2KYD3_9EUKA3.210e-4640.08Uncharacterized protein n=1 Tax=Arcella intermedia... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1190..1224
NoneNo IPR availableCOILSCoilCoilcoord: 70..101
NoneNo IPR availablePFAMPF14570zf-RING_4coord: 11..58
e-value: 9.2E-19
score: 66.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 936..1167
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 510..524
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 391..459
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 271..549
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 582..602
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1063..1127
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 335..377
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1036..1050
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 320..334
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1001..1026
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 720..743
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 966..985
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 617..668
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 480..509
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 722..737
NoneNo IPR availablePANTHERPTHR12603:SF0CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 4coord: 6..801
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 7..65
IPR003954RNA recognition motif domain, eukaryoteSMARTSM00361rrm2_1coord: 124..205
e-value: 1.0E-8
score: 45.0
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 1..75
e-value: 2.9E-23
score: 83.0
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 144..203
e-value: 8.7E-5
score: 22.3
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 123..209
score: 10.172579
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 124..205
e-value: 3.0E-19
score: 70.6
IPR039780CCR4-NOT transcription complex subunit 4PANTHERPTHR12603CCR4-NOT TRANSCRIPTION COMPLEX RELATEDcoord: 6..801
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 11..54
score: 10.92546
IPR034261CNOT4, RNA recognition motifCDDcd12438RRM_CNOT4coord: 118..217
e-value: 2.25437E-36
score: 130.737
IPR039515NOT4, modified RING finger, HC subclass (C4C4-type)CDDcd16618mRING-HC-C4C4_CNOT4coord: 11..55
e-value: 4.29113E-27
score: 102.308
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 121..213

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_41contigScGOVlb_41:4043181..4046861 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi3703.t1Gvermi3703.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_41 4043181..4046861 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi3703.t1 ID=Gvermi3703.t1|Name=Gvermi3703.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=1227bp
MAEEEDDMPQCPLCLEELDSTDRAVEACQCGYQICLWCLHHIREQLNSRC
PACRTPYQEQNFKYAEVNPEEAAKEAKERATAKKERERKEKMKEIEKERA
RAAAVSLQKAKSNLKHARIIQKNLVYVIGLSLTLAREEAIRRADMFGKYG
RMLRILVNRSHPFNADAPGGPSISAYVQYVRDSDASAAVRAMNNAVLDGR
EIRCAIATTKYCDAFVRNAAASSDPSAAHFCGNQNCMYYHSLCTEETLTR
EEVLARQLGPPPPAHLFLPAPANGRTTNGTQPIHPRLAAHSVASGLVPPN
RPAPRPFAVTSTSTVPPASSAPPSVHPPSSSAPALPLPCTNANPTVVQNT
NTPAGLPPESSSPRRSTVSEIQQPSYPNGTPPDSPKGSRRPPTRLQRSPT
SRDSSTSKFPRPSPTSTSTKPPSSSSAPLPSSVGWATSQASATSRVSPRQ
SSDEPSSSRPKLRLQPRRSREPSPPPGFENPASSSGSAPTKPPGFDIPTS
SVSNDTKGNVNILRDRKVEVAKGKQVKKSSASPPPGFGRGMGSQRVDGKQ
TVVNDVAAAWAQEAVADEVFSAREQRLRSDFVGQVERESAPIPHDNPDSR
SELAQVLAKIGGDLGVSSEFKSMQASRPPPVPPAAPARSRHASTPTVSDR
NANVAPMGSPARLGSLFGNPTANVGYAVPSTPFPSTTAIANPTAPSSTPA
YRGAFDNAIAQKLAASRVSQLPMASPRRNTSRFGFAQRESTGDVPVSMAP
RSATSQPRSVSFQTSSSQAAYPAMSSSSEVFVRSHGANDVRQEQLLMNDL
LHAAKTSKPVFLGTSRQNKSRFDFADHGTQPRSANYPPRSVRMNNNAPPK
NISTRGRGHVNQSDSIASLAQLSTQEKLASIFNSAQMSGEALPPMPTFDA
QIDPLANPNVPATPSKPVVHDDSHRSFRSVTRAAQVVRKDKSRVPDMSHP
RQSSMPPPGFREATPGISPESTTVEKASTNSGVARIVASGGYVSSSKKEN
TSHGTSREDSKSTGADGLQDDRRKTKPQRKREKKGKHSRELTEKSNGTDG
KQKGVRSVPSTPGVHPVQVTQPVKVTQAHSAHSVRTGQAFQPSQIVQPAQ
PVKVTKSVQQIPRNRRTAEMGMVRSSSPPTPSAPPKLPRAERVPERAQGV
SVVKDSQKLSNEQVKKPSDDSAVVLIPSKLSEDAGKYMSVSELEREVEAA
KAREAQLQDKLLELQRRIRSYDNVRT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003954RRM_dom_euk
IPR013083Znf_RING/FYVE/PHD
IPR000504RRM_dom
IPR012677Nucleotide-bd_a/b_plait_sf
IPR039780Mot2
IPR001841Znf_RING
IPR034261CNOT4_RRM
IPR039515NOT4_mRING-HC-C4C4
IPR035979RBD_domain_sf