Gvermi3693.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi3693.t1
Unique NameGvermi3693.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length1197
Homology
BLAST of Gvermi3693.t1 vs. uniprot
Match: A0A2V3IWU5_9FLOR (Pumilio-like n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IWU5_9FLOR)

HSP 1 Score: 876 bits (2264), Expect = 1.870e-298
Identity = 760/1185 (64.14%), Postives = 838/1185 (70.72%), Query Frame = 0
Query:  104 MPTRAA-----PHPHHSIVRSESAPLDLFDHSFAADFNNLSLASSPDLDPFCIPRPLNVSRH-AHPPSTSLSSSPSHNNLPLPGQRKPPHPSNNSNNITINNASNNAASYLSNKPLASRSVSSVELAEIVNAPRN--RNPFPPRLSPVKPLTSQXXXXXXXXAPPHAHSSCHFPDWSVFDMIQNDFPETPAPALAPLQHSTRQSSMPTNASAHRPAAHIKPVAH-RRSRLASTASLDLDLNRLAVG-------DLPEPP-------------------------AAGAPSEPPPLTHSELFRPVSSSLPRHRRSVSVNWTGNLESLADEIPRSASRPNLLNTADHTPSLFGNTSDQLLHSSSGITSQTSSAVTKSESASPEQHTPVSTASST-HPGFSAPIPSSASNPG--SSSQPHLTAGNTSFPSRAQPLS--QAAFPPVAVPDAHVP----RVDDLSFPPLHEYDHLYQ-----------------EPREMPVPNLSANVQSGNHSFKPMGS-------------SMGA--FPPAQSDLLGAASGHMQQLQESSDYANIFNGMGLFPSPFSNTNMVLGAGGTPPYSHTFRDGIDGLAALDNLKNMGLQMAAFLNAQRQLYAAQVAHMAALTGSTGLSNPNAFTAMSNSFGHLGNGG--HSSHLRTPW---DSAA--TSHRTG-PRGKHHYDQHRGGNSHSGNKKAGSMDQNHKARNGRGRRNHRVQDDVSFVSGHKPGERMGIGSSVAGGSIQDSSP-SRSALLEEFRATSNSIGRGFGSMSELTMSGAYGNLGQVPNGREWQLSEIKNNVVEFATDQHGSRFIQQKLETASHDDKDCILKQVLTDAHRLMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXILIVGEGGVSASPLTHLVRDQFGNYVVQRVLDVALTSQRERVVSILRAQVPAIKKYSYGKHIIARLEDHQVAPTAGF-TTGHPVHPQSGALGSVPRAERSVGPSIVSVGSSQGIPNSSRNYFYYD 1196
            MPTR       PH HHS+VRSESAPLDLFDHSFAADFNNLSLASSP+LDPF IPRP+N+  H   PPS SLSSSPS+N L LP QRKPPHPSN               +   NK L  RS+SS+ELAEIVNA R+   N FP RLSPVKP TS             + S   + DWSVFDMIQNDFPETPAPAL           + + A+AHR A+H+KP+AH RRSR+ STASLDLDL+RLA         D P PP                              +E   + H ++FR    S+PRHRRSVSVNWTGNLE L  EIPRSASRPNLLN  D T SLF    DQLLH+SSGITS+TSS VT SES SPE HTPVS A+    P  SAP+  S++     SSSQ HLT+   S P RA   S  Q  F   A+ D+H+     RVDDLSFPPL EYDHLY                    RE PVP L+  VQ  N +F   G+             + GA  FP AQ DLL AA  H+Q L  ++DY+NIFNG+GLFP+PFSNTNM +G  G   YS +FR+G   +AA DNLKNM LQMAAFLNAQ+QLYAAQVAHMAALTG+TGLSNPNAF A+ N F HLGNGG  HSSHLRTPW   DSAA  TSHR   PRGKHHYDQHRG   H+GNKK+GSMDQ+HKARNGRGRRNHR QD+V+ +S HK  +R+G+GS+V GG IQD+S  +RSALLEEFRATSNSIGRGFGSMS+LT+SGAYGNLG VPNGREWQLSEIKNNVVEFATDQHGSRFIQQKLE+A+ +DKD ILKQ LTDA RLM                                   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX LI GE G SASPLTHLVRDQFGNYVVQRVLDVA + QRE+VV+ILRAQVPAIKKYSYGKHIIARLE+HQ   +  +   GH VH     LGSV R ER  G S VS+  +Q IP +S N+ Y D
Sbjct:    1 MPTRPPAYHNNPH-HHSLVRSESAPLDLFDHSFAADFNNLSLASSPELDPFSIPRPINLPHHQTRPPSASLSSSPSYNTLSLPSQRKPPHPSNXXXXXXXXXXXXXXXN-THNKLLPPRSISSLELAEIVNANRSSPHNSFPSRLSPVKPPTSS------------SSSKSPYHDWSVFDMIQNDFPETPAPAL-----------VTSAAAAHRAASHLKPLAHHRRSRMHSTASLDLDLSRLAAXXXXXDPIDTPSPPNQXXXXXXXXXXXXXXXXXXXXXXXXXXXXTERASINHDDIFRSGHPSVPRHRRSVSVNWTGNLEPLTSEIPRSASRPNLLNNPDPTSSLFATNPDQLLHTSSGITSRTSSVVTASESTSPEPHTPVSAAAPVARPALSAPMQQSSAPKSVPSSSQSHLTSSVNSVPKRAHTASVAQKPFGASALVDSHLSNSSARVDDLSFPPLREYDHLYDPRLSHQHAQHNLXXXXXHQREAPVPALTGTVQPPNPAFPTPGAXXXXXXXXXXXXXNTGATGFPSAQPDLLVAAPSHVQPLPGTTDYSNIFNGVGLFPTPFSNTNMGIGNTGGHTYSDSFREG---MAAADNLKNMSLQMAAFLNAQQQLYAAQVAHMAALTGNTGLSNPNAFAAIPNQFSHLGNGGSAHSSHLRTPWELRDSAAGSTSHRPAVPRGKHHYDQHRGATGHTGNKKSGSMDQSHKARNGRGRRNHRSQDEVALMSAHKSTDRVGMGSNVVGGPIQDASTHNRSALLEEFRATSNSIGRGFGSMSDLTISGAYGNLGHVPNGREWQLSEIKNNVVEFATDQHGSRFIQQKLESATQEDKDSILKQALTDAQRLMTDVFGNYVVQKLLEHGGNNAVKLIAAELEGRMLTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLISGESGASASPLTHLVRDQFGNYVVQRVLDVARSPQREKVVAILRAQVPAIKKYSYGKHIIARLEEHQGVSSGSYGNIGHTVHSHGSNLGSVQRVERGAGTSSVSMAVNQSIPFTSHNFSYCD 1157          
BLAST of Gvermi3693.t1 vs. uniprot
Match: R7Q7W3_CHOCR (PUM-HD domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q7W3_CHOCR)

HSP 1 Score: 408 bits (1049), Expect = 9.040e-120
Identity = 551/1175 (46.89%), Postives = 685/1175 (58.30%), Query Frame = 0
Query:  115 SIVRSESAPLDLFDHS------FAADFNNLSLASSPDLDPFCIPRPLNV----SRHAHPPSTSLSSSPS---------HNNLPLPG---QRKPPHPSNNSNNITINNASNNAASYLSNKPLASRSVSSVELAEIVN-----------APRNRNPFPPRLSPVKPLTSQXXXXXXXXAPPHAHSSCHFPD--------W--SVFDMIQNDFPETPA---------PALAPLQHSTRQSSMPTNASAHRPAAHIKPVAHRRSRLASTASLDLDLNRLAVGDLPEPPAAGAPSEP-------PPLTHSELFRPVSSSLPRHRRSVSVNWTGNLESLADEIPRSASRPNLL----------NTADHTPSLFGNTSDQLLHSSSGITSQTSSAVTKSESASPEQHT-PVSTASSTHPGFSAPIPSSASNPGSSSQPHLTAGNTSFPSRAQPLSQAAFPPVAVP------DAHVPRVDDLSFPPLHEYDHLYQEPREMPVPNLSANVQSGNHSFKPMGSSMGAFPPAQSDLL---GAASGHMQQLQESSDYANIFNGMGLFPSPFSN--TNMVLGAGGTPPYSHTFRDGIDGLAALDNLKNMGLQMAAFLNAQRQLYAAQVAHMAALTGSTGLS-NPNAFTAMSNSFGHLGNGGHSSHLRTPWDS---AATSHRTGPRGKHHYDQHRGGNSH----SGNKKAGSMDQNHKARNGRGRRNHRVQDDVSFVSGHKPGERMGIGSSVAGGSIQDSSPSRSALLEEFRATSNSIGRGFGSMSELTMSGAYGNL---GQVPNGREWQLSEIKNNVVEFATDQHGSRFIQQKLETASHDDKDCILKQVLTDAHRLMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXILIVGEGGVSASPLTHLVRDQFGNYVVQRVLDVALTSQRERVVSILRAQVPAIKKYSYGKHIIARLEDHQVAPTAGFTTGH--PVHPQSGALGSVPRAERSVGPSIVSVGSSQGIPNSSRNYFYY 1195
            S+VRSESAP+++ + +        +D +NLS+++         P PL+     S H HP + + +++ S         H+  P      Q+K  H                     +NKP  +RS+SSVELA IVN           A  + NP    LS      S          P +A S+   P         W  +VFDMIQ DFP+TP+         P L+ +Q   +          HRP+ H      RR+RL STASLD+DL+R+   DL        P++        PP  H             HRRS S+NW  +L  L   + RS+SR N+           +     P +    S  +  S S  T    +AV  S S+S  Q T P  +    + G S+P  S A+        HLT  + +  S     + +   P ++P      +  +  +DDL+ P L  YD L+ EP E     L+ +  S   +          +P +Q ++    G  + H Q L  SS YAN+F GMGL+PSPFS   + +  G G +P Y+ +FRDG   LAA DNLKNM +QMAAFL+AQ+Q YAAQ+A MAA+TG++  + +P  + A +   GH+G+  ++ H+R+PWD+    A  +R  PR KHH+DQ+RGG +     S  KK   +D  HK R   GRR +R  +DV F+  HK GER+G G+    GS+QDSS +RSALLEEFRATS SIGRG GS+ ++++SG          + +GREWQLSEIK NVVEFATDQHGSRFIQQKLE+AS +D+D IL+Q LT+A RLM                                     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  ILI+GEG  ++SPL HLVRDQFGNYVVQRVLDVA   QRERVV+ILRAQVPAIKKYSYGKHIIARLE+HQ    +G T+ H    H  +GA       ER V P+++  G S G+P+   +Y YY
Sbjct:   42 SLVRSESAPINILEENSHPSSHHISDLSNLSISARQ-------PSPLDSDHPRSSHHHPMNFAAAAANSIQSAHTASAHSLAPFANRGHQQKQKH------------------HVPTNKPPPARSLSSVELAAIVNGVSTPGVTAVPAHMSANPNATVLSAS---ASAAKAAGQKKIPSNAPSNSGKPSSLGNSAPAWHKTVFDMIQEDFPKTPSNMFSSPLPPPGLSGIQDGGQHVE-------HRPSGH-----ERRARLPSTASLDIDLDRITAADLASDHGTARPADEGMRTQDLPPRIH-------------HRRSASINWPADLSGLRSNMSRSSSRSNVAASPPSGVYFPSKPSDIPPMSSPLSSVVTGSGSISTGLLPAAVAASGSSSSAQSTSPTGSVRKHNVGVSSPQGSPAT--------HLTGRSGTNVSHVSNSTHSQMNPYSLPSTGHNANTSLSSIDDLNVPGLGNYD-LFYEPSEAAALGLTPSQSSVFQTP--------TYPSSQRNMAFASGLENSHAQSLGGSSQYANVFPGMGLYPSPFSTNPSGVESGTGVSPGYTESFRDG---LAAADNLKNMSIQMAAFLSAQQQFYAAQMARMAAITGTSAFTGSPTPYGAGAVPGGHVGHTSNAPHMRSPWDARDPTAPVYRGYPRSKHHFDQYRGGPNAGPHLSNQKKNTGLDLGHKNRGPHGRRRNRGHEDV-FLGVHKSGERVGYGNGGLSGSMQDSSHTRSALLEEFRATSLSIGRGIGSVGDVSLSGXXXXXXXGSSLHSGREWQLSEIKENVVEFATDQHGSRFIQQKLESASPEDRDAILRQALTEAQRLMTDVFGNYVVQKLLDHGGANAVKLIAAELEGRMLVLSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIEILIMGEGDPNSSPLNHLVRDQFGNYVVQRVLDVARPPQRERVVTILRAQVPAIKKYSYGKHIIARLEEHQ--SNSGSTSYHHGQGHSHNGASHGSLHRERHVSPAMMPAGVSHGLPSGPNDYIYY 1140          
BLAST of Gvermi3693.t1 vs. uniprot
Match: A0A7S1TH30_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TH30_9RHOD)

HSP 1 Score: 92.4 bits (228), Expect = 1.860e-15
Identity = 53/107 (49.53%), Postives = 70/107 (65.42%), Query Frame = 0
Query:  760 GSSVAGGSIQDSSPSRSALLEEFRATSNSIGRGFGSMSELTMSGAYGNLGQVPNGREWQLSEIKNNVVEFATDQHGSRFIQQKLETASHDDKDCILKQVLTDAHRLM 866
            G+S  G    D+   RS LLEEFRATS S+GR       +   G+   +  +   R+W+LSEI+ +VVEFATDQHGSRFIQQKLE+A  D+ + +L++ L D HRLM
Sbjct:  405 GNSFGGMVTTDNPLPRSPLLEEFRATSLSVGR-----ISMAGDGSTNVISSLHGLRDWKLSEIREHVVEFATDQHGSRFIQQKLESALPDEVEAVLQESLNDVHRLM 506          
BLAST of Gvermi3693.t1 vs. uniprot
Match: M2VXZ4_GALSU (RNA-binding protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2VXZ4_GALSU)

HSP 1 Score: 87.8 bits (216), Expect = 9.380e-14
Identity = 41/68 (60.29%), Postives = 54/68 (79.41%), Query Frame = 0
Query: 1073 ILIVGEGGVSASPLTHLVRDQFGNYVVQRVLDVALTSQRERVVSILRAQVPAIKKYSYGKHIIARLED 1140
            +L+ G+      PL++LV+DQFGNYVVQR+LDVA     +RVVSIL+ Q+P +KKYSYGKHIIA+LE+
Sbjct:  926 VLVRGKDSAEDCPLSNLVKDQFGNYVVQRILDVANEDHLKRVVSILKEQIPYLKKYSYGKHIIAKLEN 993          
BLAST of Gvermi3693.t1 vs. uniprot
Match: A0A7J7IE07_9RHOD (Pumilio 2 n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IE07_9RHOD)

HSP 1 Score: 83.2 bits (204), Expect = 2.680e-12
Identity = 45/70 (64.29%), Postives = 50/70 (71.43%), Query Frame = 0
Query: 1077 GEGGVSASPLTHLVRDQFGNYVVQRVLDVALTSQRERVVSILRAQVPAIKKYSYGKHIIARLEDHQVAPT 1146
            G GGV   PL  LV+DQFGNYVVQRVLDVA   QRE  V +LR  +  IK+YSYGKHIIARLE+   A T
Sbjct: 1016 GNGGV---PLMDLVQDQFGNYVVQRVLDVANEEQRECAVQLLRVNIGVIKRYSYGKHIIARLENASFANT 1082          
BLAST of Gvermi3693.t1 vs. uniprot
Match: A0A1X6P0H9_PORUM (PUM-HD domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P0H9_PORUM)

HSP 1 Score: 82.0 bits (201), Expect = 6.520e-12
Identity = 57/115 (49.57%), Postives = 67/115 (58.26%), Query Frame = 0
Query:  768 IQDSSPSRSALLEEFRATSNSIGRGFGSMSEL--------------TMSGAYGNLGQVPNG--REWQLSEIKNNVVEFATDQHGSRFIQQKLETASHDDKDCILKQVLTDAHRLM 866
            +  S  +RSALLEEFRATS S+ RG G    L               M G     G V  G  REW LSE++ ++VEFATDQHGSRFIQQ+LE AS  D D +L + L DA RLM
Sbjct: 1038 VDGSGHARSALLEEFRATSLSVVRG-GDADLLGXXXXXXXXXXVVDLMGGTAAGAG-VGTGAAREWALSELRGHIVEFATDQHGSRFIQQQLEGASPADADMVLTESLADAPRLM 1150          
BLAST of Gvermi3693.t1 vs. uniprot
Match: A0A7S1ESJ0_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1ESJ0_9RHOD)

HSP 1 Score: 79.7 bits (195), Expect = 1.900e-11
Identity = 40/61 (65.57%), Postives = 47/61 (77.05%), Query Frame = 0
Query: 1079 GGVSASPLTHLVRDQFGNYVVQRVLDVALTSQRERVVSILRAQVPAIKKYSYGKHIIARLE 1139
            G  S   L  LVRDQFGNYVVQRVLDVA   QRER V++LR+++ +IKK SYGKHI+ RLE
Sbjct:  510 GSSSRCALPDLVRDQFGNYVVQRVLDVAEADQRERAVNLLRSEIDSIKKCSYGKHIMMRLE 570          
BLAST of Gvermi3693.t1 vs. uniprot
Match: A0A2V0NWA9_9CHLO (Pumilio-like protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0NWA9_9CHLO)

HSP 1 Score: 79.3 bits (194), Expect = 3.920e-11
Identity = 36/63 (57.14%), Postives = 49/63 (77.78%), Query Frame = 0
Query: 1077 GEGGVSASPLTHLVRDQFGNYVVQRVLDVALTSQRERVVSILRAQVPAIKKYSYGKHIIARLE 1139
            GE GV  SPL  ++RDQFGNYVVQ++L+V    QRER++  LR Q+P +K+ +YGKHI+AR+E
Sbjct:  933 GEAGVCDSPLHQMMRDQFGNYVVQKLLEVCNEDQRERLLEQLRVQLPYLKRLTYGKHIVARVE 995          
BLAST of Gvermi3693.t1 vs. uniprot
Match: M1V6X3_CYAM1 (Similar to translational repressor pumilio n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1V6X3_CYAM1)

HSP 1 Score: 77.4 bits (189), Expect = 1.690e-10
Identity = 47/94 (50.00%), Postives = 57/94 (60.64%), Query Frame = 0
Query: 1077 GEGGVSAS--------PLTHLVRDQFGNYVVQRVLDVALTSQRERVVSILRAQVPAIKKYSYGKHIIARLEDH---QVAPTAGFTTGHP--VHP 1157
            G GG S +        PL  LV+DQFGNYVVQRVLDVA   QR++   +LRA +  IK++SYGKHI+ARLE      +APT     G P   HP
Sbjct: 1291 GGGGSSGATALPRNSVPLIDLVQDQFGNYVVQRVLDVAGDEQRQQAAELLRANLNVIKRFSYGKHILARLESTGAAAMAPTFANREGAPGGAHP 1384          
BLAST of Gvermi3693.t1 vs. uniprot
Match: A0A0D2L0K7_9CHLO (PUM-HD domain-containing protein n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2L0K7_9CHLO)

HSP 1 Score: 75.1 bits (183), Expect = 7.890e-10
Identity = 33/63 (52.38%), Postives = 48/63 (76.19%), Query Frame = 0
Query: 1077 GEGGVSASPLTHLVRDQFGNYVVQRVLDVALTSQRERVVSILRAQVPAIKKYSYGKHIIARLE 1139
            G G ++ SPL  ++RDQFGNYVVQ++L+V    QRER++  LR Q+P +K+ +YGKHI+ R+E
Sbjct:  980 GAGALADSPLHQMMRDQFGNYVVQKLLEVCNEDQRERLLEQLRVQLPYLKRLTYGKHIVTRVE 1042          
The following BLAST results are available for this feature:
BLAST of Gvermi3693.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IWU5_9FLOR1.870e-29864.14Pumilio-like n=1 Tax=Gracilariopsis chorda TaxID=4... [more]
R7Q7W3_CHOCR9.040e-12046.89PUM-HD domain-containing protein n=1 Tax=Chondrus ... [more]
A0A7S1TH30_9RHOD1.860e-1549.53Hypothetical protein (Fragment) n=1 Tax=Compsopogo... [more]
M2VXZ4_GALSU9.380e-1460.29RNA-binding protein n=1 Tax=Galdieria sulphuraria ... [more]
A0A7J7IE07_9RHOD2.680e-1264.29Pumilio 2 n=1 Tax=Cyanidiococcus yangmingshanensis... [more]
A0A1X6P0H9_PORUM6.520e-1249.57PUM-HD domain-containing protein n=1 Tax=Porphyra ... [more]
A0A7S1ESJ0_9RHOD1.900e-1165.57Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A2V0NWA9_9CHLO3.920e-1157.14Pumilio-like protein n=1 Tax=Raphidocelis subcapit... [more]
M1V6X3_CYAM11.690e-1050.00Similar to translational repressor pumilio n=1 Tax... [more]
A0A0D2L0K7_9CHLO7.890e-1052.38PUM-HD domain-containing protein n=1 Tax=Monoraphi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR01217PRICHEXTENSNcoord: 37..58
score: 36.36
coord: 78..95
score: 36.67
coord: 160..185
score: 26.15
coord: 59..75
score: 51.76
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 35..86
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 341..368
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 10..34
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 285..322
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 677..694
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 399..490
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..107
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 291..306
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 722..745
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 677..745
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 399..499
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 160..178
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 160..198
NoneNo IPR availablePANTHERPTHR12537:SF12MATERNAL PROTEIN PUMILIOcoord: 436..1141
NoneNo IPR availablePANTHERPTHR12537RNA BINDING PROTEIN PUMILIO-RELATEDcoord: 436..1141
IPR001313Pumilio RNA-binding repeatSMARTSM00025pum_5coord: 1001..1036
e-value: 7.3E-7
score: 38.8
coord: 1037..1072
e-value: 2.0E-5
score: 34.0
coord: 929..964
e-value: 8.4E-8
score: 41.9
coord: 1081..1116
e-value: 0.0018
score: 27.5
coord: 893..928
e-value: 2.3E-6
score: 37.2
coord: 965..1000
e-value: 3.7E-6
score: 36.5
coord: 857..892
e-value: 0.002
score: 27.4
coord: 821..856
e-value: 2.0E-7
score: 40.7
IPR001313Pumilio RNA-binding repeatPFAMPF00806PUFcoord: 864..894
e-value: 2.0E-5
score: 24.2
coord: 969..1003
e-value: 7.2E-12
score: 44.8
coord: 933..967
e-value: 2.1E-5
score: 24.1
coord: 1091..1116
e-value: 1.5E-4
score: 21.4
coord: 1042..1074
e-value: 1.4E-6
score: 27.8
coord: 1007..1036
e-value: 3.7E-7
score: 29.7
coord: 899..930
e-value: 3.2E-8
score: 33.1
coord: 825..858
e-value: 3.7E-10
score: 39.3
IPR001313Pumilio RNA-binding repeatPROSITEPS50302PUMcoord: 821..856
score: 11.113707
IPR001313Pumilio RNA-binding repeatPROSITEPS50302PUMcoord: 1080..1116
score: 11.113707
IPR001313Pumilio RNA-binding repeatPROSITEPS50302PUMcoord: 929..964
score: 10.297108
IPR001313Pumilio RNA-binding repeatPROSITEPS50302PUMcoord: 1001..1036
score: 11.393682
IPR001313Pumilio RNA-binding repeatPROSITEPS50302PUMcoord: 857..892
score: 9.363852
IPR001313Pumilio RNA-binding repeatPROSITEPS50302PUMcoord: 893..928
score: 10.740404
IPR001313Pumilio RNA-binding repeatPROSITEPS50302PUMcoord: 1037..1072
score: 9.013881
IPR001313Pumilio RNA-binding repeatPROSITEPS50302PUMcoord: 965..1000
score: 10.437096
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 810..1145
e-value: 1.1E-125
score: 421.2
IPR033133Pumilio homology domainPROSITEPS50303PUM_HDcoord: 800..1142
score: 118.929962
IPR033712Pumilio, RNA binding domainCDDcd07920Pumiliocoord: 818..1138
e-value: 1.20338E-144
score: 437.023
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 817..1139

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_41contigScGOVlb_41:4023558..4027148 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi3693.t1Gvermi3693.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_41 4023558..4027148 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi3693.t1 ID=Gvermi3693.t1|Name=Gvermi3693.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=1197bp
MEVVPKQPQIPPSSAWSTPLTFSDRDHSQVRPPSVPRSTRPPNPPPSHPN
HSPPPVSRPTALPSPPSLNPSASPPSLTPHAPTDTLPPSVPAEAHLSAPS
IFDMPTRAAPHPHHSIVRSESAPLDLFDHSFAADFNNLSLASSPDLDPFC
IPRPLNVSRHAHPPSTSLSSSPSHNNLPLPGQRKPPHPSNNSNNITINNA
SNNAASYLSNKPLASRSVSSVELAEIVNAPRNRNPFPPRLSPVKPLTSQP
LSSQPLNAPPHAHSSCHFPDWSVFDMIQNDFPETPAPALAPLQHSTRQSS
MPTNASAHRPAAHIKPVAHRRSRLASTASLDLDLNRLAVGDLPEPPAAGA
PSEPPPLTHSELFRPVSSSLPRHRRSVSVNWTGNLESLADEIPRSASRPN
LLNTADHTPSLFGNTSDQLLHSSSGITSQTSSAVTKSESASPEQHTPVST
ASSTHPGFSAPIPSSASNPGSSSQPHLTAGNTSFPSRAQPLSQAAFPPVA
VPDAHVPRVDDLSFPPLHEYDHLYQEPREMPVPNLSANVQSGNHSFKPMG
SSMGAFPPAQSDLLGAASGHMQQLQESSDYANIFNGMGLFPSPFSNTNMV
LGAGGTPPYSHTFRDGIDGLAALDNLKNMGLQMAAFLNAQRQLYAAQVAH
MAALTGSTGLSNPNAFTAMSNSFGHLGNGGHSSHLRTPWDSAATSHRTGP
RGKHHYDQHRGGNSHSGNKKAGSMDQNHKARNGRGRRNHRVQDDVSFVSG
HKPGERMGIGSSVAGGSIQDSSPSRSALLEEFRATSNSIGRGFGSMSELT
MSGAYGNLGQVPNGREWQLSEIKNNVVEFATDQHGSRFIQQKLETASHDD
KDCILKQVLTDAHRLMTDVFGNYVVQKLLEHGGHNAVKLIAAELEGRMLV
LSLHMYGCRVVQKALEVLDSSARASLVRELNGHVLKCIRDQNGNHVIQKC
VELVEPDSVQFIVDAVLGQAVTLAGHSYGCRVVQRILEHGAPKQKAPIMS
EIMSSIPDLIKDQYGNYVIQHVVEHGTIAERSVIMRLVVAEVCQLSQHKF
ASNVVERCLQFGSLKEREILIEILIVGEGGVSASPLTHLVRDQFGNYVVQ
RVLDVALTSQRERVVSILRAQVPAIKKYSYGKHIIARLEDHQVAPTAGFT
TGHPVHPQSGALGSVPRAERSVGPSIVSVGSSQGIPNSSRNYFYYD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001313Pumilio_RNA-bd_rpt
IPR011989ARM-like
IPR033133PUM-HD
IPR033712Pumilio_RNA-bd
IPR016024ARM-type_fold