Gvermi3484.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi3484.t1
Unique NameGvermi3484.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length188
Homology
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BLAST of Gvermi3484.t1 vs. uniprot
Match: A0A2V3IKC8_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IKC8_9FLOR)

HSP 1 Score: 114 bits (286), Expect = 3.220e-26
Identity = 69/163 (42.33%), Postives = 90/163 (55.21%), Query Frame = 0 
Query:    2 MVARNLDKLNLHRLMELYTLTLLAFGHVNHLVELVFECAHQPLKRCITRGNHPNDHLSAMEHCLGNDWQARLLLLRSEVESRDNKKSRSALFG-----LKRMLLGRF-------HEESNVSDTELDQAIQDVFAGPVKLILRLQWAPRTLRSLETSVWISRGK 152
            ++A+ LDK NLHRL+ELY  T+ AFGH  H  ELVFE AHQPLKRC++R NH N H+S +EHCL NDWQ RL  L   V   D+++      G     LK++LLGR         EE  +   E D+ +  +F  PV   +R +       S    +W   GK
Sbjct:  359 LLAKVLDKPNLHRLIELYGNTIPAFGHARHFTELVFETAHQPLKRCVSRSNHHNAHVSTVEHCLSNDWQGRLACL--HVPLPDDRQDGVKCDGQKLPCLKQLLLGREAAQLKRDDEEHVIVARETDEKLHRLFCAPVLSEIRSEGKTGIAMSPTGFMWRGIGK 519
The following BLAST results are available for this feature:
BLAST of Gvermi3484.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IKC8_9FLOR3.220e-2642.33Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_41contigScGOVlb_41:2075732..2076295 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi3484.t1Gvermi3484.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_41 2075732..2076295 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi3484.t1 ID=Gvermi3484.t1|Name=Gvermi3484.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=188bp
MMVARNLDKLNLHRLMELYTLTLLAFGHVNHLVELVFECAHQPLKRCITR
GNHPNDHLSAMEHCLGNDWQARLLLLRSEVESRDNKKSRSALFGLKRMLL
GRFHEESNVSDTELDQAIQDVFAGPVKLILRLQWAPRTLRSLETSVWISR
GKSSQCQAEFGATGLEGEKELRVLRGIWELYVEFTTS*
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